mRNA_P-wetherbeei_contig5430.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5430.3.1
Unique NamemRNA_P-wetherbeei_contig5430.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A353LUA1_9PROT (Cyclopentanol dehydrogenase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LUA1_9PROT)

HSP 1 Score: 379 bits (973), Expect = 5.090e-131
Identity = 194/251 (77.29%), Postives = 218/251 (86.85%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            MAGRVEGKIAFVTGGG+GMG+EHALL+AE GA+LIVSDVNE  GR+TV  INGKGGQ LFIKFDVA EAEW+ AV+QA+ +FGRVDILVNNAGIL M +   T+ +ELDR+LD+NVKGVFYGCKHILPAMQKAGGGSIVNISSI G+IG   AAAYQA+KGAVRILTKSVAV+YAP NIR NS+HPG+IRT MT+  L N    +A L TTILRRPAEPREVSY VLFLAS E+SY+TGAE+VVDGGYTTM
Sbjct:    1 MAGRVEGKIAFVTGGGAGMGKEHALLMAEEGATLIVSDVNETEGRQTVEEINGKGGQALFIKFDVASEAEWQGAVEQAVTTFGRVDILVNNAGILAMNSVDKTSADELDRVLDVNVKGVFYGCKHILPAMQKAGGGSIVNISSIYGMIGAPVAAAYQASKGAVRILTKSVAVDYAPHNIRVNSVHPGVIRTNMTKGILENAAGTEAILATTILRRPAEPREVSYAVLFLASDEASYVTGAELVVDGGYTTM 251          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A2E5BV84_9HYPH (Cyclopentanol dehydrogenase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E5BV84_9HYPH)

HSP 1 Score: 332 bits (850), Expect = 2.560e-112
Identity = 168/249 (67.47%), Postives = 204/249 (81.93%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            GRV+GKIAFVTGG +GMGR HALLLA  GA+L+V+D++E GG   V  IN +GGQ  FIK DVA  ++WK+AV+Q +A+FG VDIL+NNAGIL++ T QDT  E+ DR+LDINVKGVFYG K++LPAMQ AGGGSIVNISSI  +IG   +AAYQA+KGAVR+LTKS AV+YAPF IR NS+HP IIRT MT+D LV+E   +  +GTT+L RPAEP EVSY VLFLAS E+SY+TG+E+VVDGGYTTM
Sbjct:    2 GRVDGKIAFVTGGANGMGRCHALLLAREGATLVVTDMDEKGGHAVVDEINAEGGQARFIKLDVACPSDWKSAVEQTIATFGCVDILINNAGILVLSTVQDTLDEDFDRVLDINVKGVFYGMKYMLPAMQAAGGGSIVNISSIYVLIGAPASAAYQASKGAVRLLTKSTAVDYAPFKIRVNSVHPSIIRTNMTKDMLVDEAITQQIIGTTLLGRPAEPMEVSYAVLFLASDEASYMTGSEVVVDGGYTTM 250          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A352Q5I8_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q5I8_9GAMM)

HSP 1 Score: 320 bits (820), Expect = 9.680e-108
Identity = 157/249 (63.05%), Postives = 200/249 (80.32%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYT 747
            MAGRV+ K+  VTGGG GMGREHALLLAE G  ++++D++EA G++TV  +N  GG+ +FIK DVA EAEWK  V  A+  FG+VD+LVNNAG+L +KT Q+TT E+ D + DIN KG+F+G KHILPAM+KAGGGSI+NISSI GI G   AAAYQA+KGAVR+ TKS AVEYA FNIR NS+HPG+I T MT D + +++  +A LG+ I+RRPA+P+EVS+ VLFLAS ESSY+TG+E+V+DGGYT
Sbjct:    1 MAGRVQDKVCLVTGGGLGMGREHALLLAEEGGRIVLTDIDEAAGQKTVEDVNAAGGEAVFIKQDVAAEAEWKTVVATAVEHFGKVDVLVNNAGVLRLKTIQETTAEDWDFINDINTKGLFFGVKHILPAMEKAGGGSIINISSIYGIAGAPSAAAYQASKGAVRVFTKSAAVEYAAFNIRVNSVHPGVIATAMTADVIADDEATQALLGSAIIRRPAQPKEVSWGVLFLASDESSYMTGSELVIDGGYT 249          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A6N6VLQ6_9HYPH (Glucose 1-dehydrogenase n=15 Tax=Bacteria TaxID=2 RepID=A0A6N6VLQ6_9HYPH)

HSP 1 Score: 317 bits (813), Expect = 1.080e-106
Identity = 162/249 (65.06%), Postives = 194/249 (77.91%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            GRV+GKIAFVTGG +GMGR HALLLA  GA+LIV+D++E GG   V  IN  GGQ  F K DV+  ++W+    +AM++FGRVDILVNNAGIL+    QDT+ E+  R+LD+NVK VFYG K+ILPAM+ AGGGSIVNISSI G+IG    AAYQA+KGAVR+LTKS AV+YAPF IR NS+HPGIIRT MT+D L +    K  L  T++ RPAEP EVSY VLFLAS ESSY+TG+E+VVDGGYTTM
Sbjct:    2 GRVDGKIAFVTGGANGMGRSHALLLAREGATLIVTDMDEKGGNAVVEEINDHGGQARFFKHDVSSVSDWERISQEAMSTFGRVDILVNNAGILVFSAVQDTSNEDFARVLDVNVKSVFYGTKYILPAMKAAGGGSIVNISSIYGLIGAPATAAYQASKGAVRLLTKSTAVDYAPFKIRVNSVHPGIIRTNMTKDLLGDADVAKQVLSATLIGRPAEPVEVSYAVLFLASDESSYMTGSEVVVDGGYTTM 250          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A2A5DQ30_9PROT (Cyclopentanol dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DQ30_9PROT)

HSP 1 Score: 303 bits (776), Expect = 4.880e-101
Identity = 155/251 (61.75%), Postives = 189/251 (75.30%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAG--AAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            GR+EGK+A VTGG  GMG+  +LL A  GA ++V+D+ E  G+  V  I   GG+ +F+K DV KE EWKA VD+A+  FG+VD+LVNNAGIL++K  QDT+ EELD +L+INVKGVF GCKH+LPAMQKAGGGSI+NISSI G+IG  G  AAAYQA+KGAVRILTKSVA EYAP NIR NS+HPG I TPMT D   + + + A +G TIL R   P EV+   LFLAS ++SY+ GAE VVDGGYT M
Sbjct:    2 GRIEGKVAIVTGGALGMGKATSLLFAREGAKVVVTDIKEVEGKAVVEAIKQAGGEAIFLKQDVTKENEWKAVVDKAIGEFGQVDVLVNNAGILLLKGCQDTSVEELDLVLNINVKGVFLGCKHVLPAMQKAGGGSIINISSIYGLIGAPGGVAAAYQASKGAVRILTKSVAAEYAPHNIRVNSVHPGYIETPMTSDITESPEMKLAVIGPTILGRTGRPEEVANATLFLASDDASYVNGAEFVVDGGYTAM 252          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A1Y5FPR8_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium 53_120_T64 TaxID=1856295 RepID=A0A1Y5FPR8_9GAMM)

HSP 1 Score: 301 bits (771), Expect = 2.620e-100
Identity = 140/247 (56.68%), Postives = 195/247 (78.95%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYT 747
            GRV+ K+  VTGG +GMGREH LLLAE G  ++++D+NE  G+ T + +  KGG+ +F+K DVA E +WK  +  A+ +FG++D+LVNNAG+ ++K+ Q+TT  + D + ++N KG+F+G KH+LPAM+KAGGGSI+NISSI GI G + A+AYQA+KGAVRI TKS AVEYAP+NIR NS+HPG+I T MT + + +++  +A LG  I+RRPAEP+EVS+ VLFLA+ ESSY+TG+E+V+DGGYT
Sbjct:    2 GRVQDKVCLVTGGAAGMGREHVLLLAEEGGRIVLTDLNEEAGQATAAEVKAKGGEAIFVKHDVASEDDWKMVIKTAVDTFGQIDVLVNNAGVFVVKSIQETTAVDWDFVNNVNTKGLFFGVKHVLPAMEKAGGGSIINISSIYGIAGASNASAYQASKGAVRIFTKSAAVEYAPYNIRVNSVHPGVIATAMTAEIMADKEATEALLGGAIIRRPAEPKEVSWGVLFLATDESSYMTGSELVIDGGYT 248          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A3B8XQJ7_9HYPH (Cyclopentanol dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3B8XQJ7_9HYPH)

HSP 1 Score: 299 bits (765), Expect = 2.210e-99
Identity = 155/251 (61.75%), Postives = 188/251 (74.90%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            MAGRVEGKIA VTGG +GMGR HA+LLA  GA+LIV+D +E  G+  +  IN +GGQ  FI  DVA   +W    +Q +++FG +DILVNNAGIL+    QDT  E+  R LD+NVKGVFYG K++LPA++ +G  SIVN+SSI G+IG    AAYQA+KGAVR+LTKS AV+YA F IR NSIHPG+IRT MT+D L +   E   L TT+L R AEP EVSY VLFLAS E+SYITGAEIVVDGGYTT+
Sbjct:    1 MAGRVEGKIALVTGGANGMGRSHAMLLAREGATLIVTDRDEEAGQAVIDEINRQGGQARFIVHDVASAEDWGRISEQTLSTFGHLDILVNNAGILLFSAVQDTGDEDFARTLDVNVKGVFYGTKYMLPALKASGKASIVNVSSIYGLIGAPMVAAYQASKGAVRLLTKSTAVDYAQFRIRVNSIHPGVIRTNMTKDLLASADMENRLLSTTLLGRAAEPEEVSYAVLFLASDEASYITGAEIVVDGGYTTL 251          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A496X4B4_9GAMM (Cyclopentanol dehydrogenase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496X4B4_9GAMM)

HSP 1 Score: 296 bits (759), Expect = 1.750e-98
Identity = 149/249 (59.84%), Postives = 189/249 (75.90%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            GRV+GK+A +TGG  GMG  H+LLLA  GA ++V+D++   G  T   I  +GG  LFI  DVA E +W++ +DQA+ ++G+VDIL+NNAGI+I+K  ++TT E+ D  + +N  GVF GCK ++PAM+KAGGGSIVNISSI GIIG   AAAYQA+KGAVR+LTKS AV+YA FNIR NSIHPG+IRTP+  D + +E   K  L TTIL R AEP EVSY VL LAS ESSY+TG+E+VVDGGYTT+
Sbjct:    2 GRVDGKVALITGGAMGMGESHSLLLAREGAKVVVTDIDNEAGEATAQQIRDEGGDALFIHHDVASEEQWQSVIDQAVEAYGKVDILINNAGIVILKPNEETTVEDWDITMAVNSTGVFLGCKTVVPAMEKAGGGSIVNISSIYGIIGAPNAAAYQASKGAVRMLTKSCAVDYAQFNIRVNSIHPGVIRTPILGDMVNDEAAIKQALATTILERMAEPIEVSYAVLLLASDESSYMTGSELVVDGGYTTV 250          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A1Y5EXZ5_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Cycloclasticus sp. 44_32_T64 TaxID=1856282 RepID=A0A1Y5EXZ5_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 7.320e-98
Identity = 152/250 (60.80%), Postives = 193/250 (77.20%), Query Frame = 1
Query:    7 GRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLV-NEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            GRV GKIA VTGG  GMGR H  LLA  GA++IV+D+NEA G+ TV  I   GG   F+  +V  E+EW + V++  AS G++D+LVNNAGILI+K  ++TT EE DR  DINVKGVF+G K +LPAMQKAGGGSIVNISSI G++G   +AAYQA KGAV++ TK+ AV+YA +NIR NS+HPG+I TPMT+D L  +E+T +A LGTTIL RPA+P+EVSY VL LAS +SS++ G+E+VVDGGYT +
Sbjct:    2 GRVSGKIALVTGGAMGMGRTHCELLAAEGATVIVTDMNEAEGQATVKSIVADGGNAEFLPLNVTVESEWLSVVEKVTASHGQIDVLVNNAGILIVKQLEETTTEEWDRTFDINVKGVFFGTKAVLPAMQKAGGGSIVNISSIYGLVGAPVSAAYQATKGAVKLFTKATAVDYAQYNIRVNSVHPGVIDTPMTKDLLHGDEETRQAILGTTILDRPAQPKEVSYAVLHLASDDSSFMNGSEMVVDGGYTAV 251          
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Match: A0A2D4S843_9GAMM (Cyclopentanol dehydrogenase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S843_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 7.320e-98
Identity = 144/251 (57.37%), Postives = 192/251 (76.49%), Query Frame = 1
Query:    1 MAGRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSMINGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTTQDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGMAGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVNEKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTTM 753
            MA R+E K+A +TG   GMGR+HAL +A  GA+++VSDV +  GRE V  I   GG+ ++   DV  EA+W   +D    +FGR+DILVNNAG+L+ K  QDT   E +R+LDIN+KGVF GCK ILPAM++AGGG+I+N+SSI G++G  GAAAYQA+KGAVR+LTKS AV+YAPF IR NS+HPG+I TPMT++ L +E+ ++  L  T+L RPA+P EV+  V+FLAS E+SY+TG+E+VVDGGYTT+
Sbjct:    1 MAQRLENKVALITGAAMGMGRQHALHMAREGAAVVVSDVADDAGREVVEEIGQSGGRAIYCHLDVVDEAQWGQVIDAGRQAFGRIDILVNNAGVLLFKAIQDTETVEWERVLDINLKGVFLGCKLILPAMREAGGGAIINVSSIYGLVGAPGAAAYQASKGAVRLLTKSTAVDYAPFGIRVNSVHPGVIDTPMTREVLADEQMQQQILQGTLLGRPAQPEEVARAVVFLASDEASYMTGSELVVDGGYTTV 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5430.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LUA1_9PROT5.090e-13177.29Cyclopentanol dehydrogenase n=2 Tax=Alphaproteobac... [more]
A0A2E5BV84_9HYPH2.560e-11267.47Cyclopentanol dehydrogenase n=2 Tax=Hyphomicrobial... [more]
A0A352Q5I8_9GAMM9.680e-10863.05Cyclopentanol dehydrogenase n=1 Tax=Porticoccaceae... [more]
A0A6N6VLQ6_9HYPH1.080e-10665.06Glucose 1-dehydrogenase n=15 Tax=Bacteria TaxID=2 ... [more]
A0A2A5DQ30_9PROT4.880e-10161.75Cyclopentanol dehydrogenase n=1 Tax=Rhodospirillac... [more]
A0A1Y5FPR8_9GAMM2.620e-10056.68Cyclopentanol dehydrogenase n=1 Tax=Gammaproteobac... [more]
A0A3B8XQJ7_9HYPH2.210e-9961.75Cyclopentanol dehydrogenase n=1 Tax=Rhodobiaceae b... [more]
A0A496X4B4_9GAMM1.750e-9859.84Cyclopentanol dehydrogenase n=2 Tax=Gammaproteobac... [more]
A0A1Y5EXZ5_9GAMM7.320e-9860.80Cyclopentanol dehydrogenase n=1 Tax=Cycloclasticus... [more]
A0A2D4S843_9GAMM7.320e-9857.37Cyclopentanol dehydrogenase n=1 Tax=Salinisphaerac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5430contigP-wetherbeei_contig5430:1381..2136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_2770
PFAMsadh_short_C2
Model size756
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00139,RC00144,RC01219,RC01220
KEGG koko:K00038,ko:K17754
KEGG ReactionR02229,R04831,R04834,R04844,R04847
KEGG Pathwayko00140,ko00930,ko01100,map00140,map00930,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.21e-107
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MUPX@1224|Proteobacteria,2TT6C@28211|Alphaproteobacteria,4BT7P@82117|unclassified Alphaproteobacteria
EC1.1.1.163,1.1.1.53
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size756
COG categoryIQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186811.67825-CDS-P-wetherbeei_contig5430:1380..21361683186811.67825-CDS-P-wetherbeei_contig5430:1380..2136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5430 1381..2136 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5430.3.1prot_P-wetherbeei_contig5430.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5430 1381..2136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5430.3.1

>prot_P-wetherbeei_contig5430.3.1 ID=prot_P-wetherbeei_contig5430.3.1|Name=mRNA_P-wetherbeei_contig5430.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MAGRVEGKIAFVTGGGSGMGREHALLLAEHGASLIVSDVNEAGGRETVSM
INGKGGQGLFIKFDVAKEAEWKAAVDQAMASFGRVDILVNNAGILIMKTT
QDTTGEELDRMLDINVKGVFYGCKHILPAMQKAGGGSIVNISSIAGIIGM
AGAAAYQAAKGAVRILTKSVAVEYAPFNIRANSIHPGIIRTPMTQDFLVN
EKTEKAFLGTTILRRPAEPREVSYPVLFLASGESSYITGAEIVVDGGYTT
M*
back to top

mRNA from alignment at P-wetherbeei_contig5430:1381..2136+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5430.3.1 ID=mRNA_P-wetherbeei_contig5430.3.1|Name=mRNA_P-wetherbeei_contig5430.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:1381..2136+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGGACGAGTAGAAGGTAAAATAGCATTTGTAACCGGCGGCGGTTC CGGCATGGGGCGCGAACATGCACTGCTGCTGGCCGAACACGGCGCGAGCC TCATTGTTTCAGACGTCAATGAGGCGGGCGGCCGCGAAACCGTCTCAATG ATCAATGGCAAGGGCGGGCAGGGCCTGTTCATCAAATTTGATGTGGCGAA GGAGGCGGAATGGAAGGCAGCCGTCGATCAGGCCATGGCCTCGTTTGGCC GGGTAGATATTCTGGTGAACAATGCCGGCATCCTGATCATGAAAACCACC CAGGACACCACAGGCGAAGAGCTGGACCGCATGCTGGACATCAATGTCAA AGGCGTGTTTTACGGCTGCAAGCATATTCTGCCCGCGATGCAGAAGGCTG GCGGCGGATCGATTGTTAACATCTCCTCCATCGCCGGCATTATCGGCATG GCGGGCGCTGCGGCCTATCAGGCGGCCAAGGGCGCGGTGCGCATTCTGAC CAAATCCGTGGCGGTGGAATATGCCCCGTTCAACATCCGCGCCAATTCCA TTCATCCGGGTATTATCCGTACACCGATGACCCAGGACTTTCTGGTGAAT GAGAAAACGGAGAAAGCATTCCTTGGCACCACCATTCTGCGCCGCCCGGC CGAACCGCGCGAGGTTTCCTATCCGGTGCTGTTCCTGGCGTCGGGCGAAT CAAGTTATATCACGGGTGCTGAAATCGTTGTCGATGGCGGCTATACGACG ATGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig5430:1381..2136+

>mRNA_P-wetherbeei_contig5430.3.1 ID=mRNA_P-wetherbeei_contig5430.3.1|Name=mRNA_P-wetherbeei_contig5430.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig5430:1381..2136+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGGACGAGTAGAAGGTAAAATAGCATTTGTAACCGGCGGCGGTTC
CGGCATGGGGCGCGAACATGCACTGCTGCTGGCCGAACACGGCGCGAGCC
TCATTGTTTCAGACGTCAATGAGGCGGGCGGCCGCGAAACCGTCTCAATG
ATCAATGGCAAGGGCGGGCAGGGCCTGTTCATCAAATTTGATGTGGCGAA
GGAGGCGGAATGGAAGGCAGCCGTCGATCAGGCCATGGCCTCGTTTGGCC
GGGTAGATATTCTGGTGAACAATGCCGGCATCCTGATCATGAAAACCACC
CAGGACACCACAGGCGAAGAGCTGGACCGCATGCTGGACATCAATGTCAA
AGGCGTGTTTTACGGCTGCAAGCATATTCTGCCCGCGATGCAGAAGGCTG
GCGGCGGATCGATTGTTAACATCTCCTCCATCGCCGGCATTATCGGCATG
GCGGGCGCTGCGGCCTATCAGGCGGCCAAGGGCGCGGTGCGCATTCTGAC
CAAATCCGTGGCGGTGGAATATGCCCCGTTCAACATCCGCGCCAATTCCA
TTCATCCGGGTATTATCCGTACACCGATGACCCAGGACTTTCTGGTGAAT
GAGAAAACGGAGAAAGCATTCCTTGGCACCACCATTCTGCGCCGCCCGGC
CGAACCGCGCGAGGTTTCCTATCCGGTGCTGTTCCTGGCGTCGGGCGAAT
CAAGTTATATCACGGGTGCTGAAATCGTTGTCGATGGCGGCTATACGACG
ATGTGA
back to top