mRNA_P-wetherbeei_contig54243.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S4MRM6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MRM6_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.460e-9 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 4 SNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEAGYG 138
SNGN +GSR+TS W NE + SLLL GSDDG VRVWD +L+ G+G
Sbjct: 1416 SNGNPKGSRMTSASWMNEMTTSLLLAGSDDGTVRVWDGILD-GFG 1459
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A836CAT4_9STRA (Raptor_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 9.550e-9 Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 7 NGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEAG 132
NG+ G+R+T++ W N A+ SLLLVGSDDGVVR+WD L+E G
Sbjct: 1356 NGHPCGARMTALHWLNPAARSLLLVGSDDGVVRIWDGLVEGG 1397
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S1XT27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT27_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 2.350e-8 Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 VSNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLE 126
++NGN G+R+TS++W N + SLLLV SDDGVVRVWD +L+
Sbjct: 118 LNNGNAYGTRMTSLKWINPETKSLLLVCSDDGVVRVWDGMLD 159
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S2U9H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9H4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 4.500e-8 Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 7 NGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLE 126
NGN + SR TS+ W NE S SLL+ GSDDG VRVWD +++
Sbjct: 73 NGNAKDSRTTSISWINEMSTSLLITGSDDGSVRVWDGIIK 112
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S4QVF6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QVF6_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.230e-8 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 4 SNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLE 126
SN N + SR+TS+ W NE S SLLL GSDDGVVR+W+ L+E
Sbjct: 302 SNRNPKKSRITSISWINEMSTSLLLTGSDDGVVRIWEGLIE 342
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S1YZH6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZH6_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.240e-8 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 4 SNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLE 126
SN N + SR+TS+ W NE S SLLL GSDDGVVR+W+ L+E
Sbjct: 634 SNRNPKKSRITSISWINEMSTSLLLTGSDDGVVRIWEGLIE 674
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A7S2P9P3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P9P3_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.170e-7 Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 SNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEA 129
SN N +G+R+T+ QW NEA++SLLL GS+DG VR++D LLEA
Sbjct: 1494 SNENPKGTRMTAAQWVNEATSSLLLTGSNDGSVRIFDGLLEA 1535
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A3P3YLQ5_PLABS (Raptor_N domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YLQ5_PLABS) HSP 1 Score: 53.9 bits (128), Expect = 4.080e-7 Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 VSNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEA 129
++NGN RGS +TS+QW N SL+ VGSDDGVVRVW + +A
Sbjct: 880 ITNGNTRGSAITSLQWLNPKHVSLVAVGSDDGVVRVWRNCHDA 922
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: A0A4D9DFT2_9STRA (Raptor_N domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFT2_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 5.020e-6 Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 19 RGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEAG 132
+ SR+TS+ W NEA++SLLL G+D+GVVRVW ++ G
Sbjct: 1542 KASRITSLAWLNEATSSLLLTGTDEGVVRVWSGVVPTG 1579
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Match: B8CBK6_THAPS (Raptor_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBK6_THAPS) HSP 1 Score: 48.5 bits (114), Expect = 3.290e-5 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 4 SNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLE 126
SN N + +R+T+ W NE + SLLL GS+DG VR+WD L E
Sbjct: 1442 SNENPKQTRMTAAAWINETNTSLLLTGSNDGSVRIWDGLFE 1482 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54243.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54243.1.1 >prot_P-wetherbeei_contig54243.1.1 ID=prot_P-wetherbeei_contig54243.1.1|Name=mRNA_P-wetherbeei_contig54243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=48bp VSNGNGRGSRLTSMQWANEASASLLLVGSDDGVVRVWDSLLEAGYGAAback to top mRNA from alignment at P-wetherbeei_contig54243:101..244- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54243.1.1 ID=mRNA_P-wetherbeei_contig54243.1.1|Name=mRNA_P-wetherbeei_contig54243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=144bp|location=Sequence derived from alignment at P-wetherbeei_contig54243:101..244- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54243:101..244- >mRNA_P-wetherbeei_contig54243.1.1 ID=mRNA_P-wetherbeei_contig54243.1.1|Name=mRNA_P-wetherbeei_contig54243.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=144bp|location=Sequence derived from alignment at P-wetherbeei_contig54243:101..244- (Phaeothamnion wetherbeei SAG_119_79)back to top |