mRNA_P-wetherbeei_contig5420.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.060e-56 Identity = 98/149 (65.77%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 4 TMPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSF 450
T PL IG+FGGG VGGGVYEI E K F IGA+V I KICVRD SK R F +GAHTT+V+DY+AIL D SINCV+ELMGG T+AKDVVFEAI+RGK V+TANKALLA+YLP I+ LLK++ V AYEAAVCGG + +N F
Sbjct: 5 TPEPLNIGLFGGGTVGGGVYEICEESNKDFLAGIGADVKISKICVRDTSKARDFSIGAHTTVVSDYKAILEDDSINCVVELMGGVTNAKDVVFEAIKRGKHVVTANKALLAQYLPEIQELLKQHPEVHFAYEAAVCGGIPIINVLQNDF 153
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.470e-54 Identity = 91/146 (62.33%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 13 PLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSF 450
PL++GMFGGG VGGGVYEI+E KK F++ G +VTI KICVRD +K RSF + HTT+VTDY+ IL D SINCV+ELMGG THAKDVVF+A+++GK V+TANKALLA+ LP +++L+ ENAG +L YEAAVCGG + + S+
Sbjct: 4 PLKVGMFGGGTVGGGVYEIMEQTKKELFKAGGVDVTIAKICVRDVNKKRSFELEKHTTMVTDYDEILEDDSINCVVELMGGVTHAKDVVFKALKKGKHVVTANKALLAQLLPEVKSLVAENAGTTLGYEAAVCGGIPIIHNMQGSY 149
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A835YR06_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR06_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.590e-52 Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 1
Query: 16 LRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGG 417
LRIGMFGGGVVGGGVYEI+ + K+A F ++G + T+VKICVRD +KPR+F V HT +VTDY+AIL D SINC+IELMGG THAKDVVFEA++RGK VITANKALLA YLP I LL L YEAAVCGG
Sbjct: 5 LRIGMFGGGVVGGGVYEILTSRKQAAFAAMGIDATVVKICVRDLAKPRTFQVEPHTQLVTDYDAILKDDSINCIIELMGGVTHAKDVVFEALKRGKHVITANKALLAAYLPEIEALLAAAPQARLGYEAAVCGG 138
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI) HSP 1 Score: 186 bits (472), Expect = 2.190e-52 Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = 1
Query: 13 PLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSF 450
PLR+GMFGGG VGGGVYEI E KKAFFQ +G + I+K+CVRD+ KPR + + T +VTDY AIL D SINCV+ELMGG T AKDVVFEAIRR K V+TANKAL+A YL I+ LLKE+ GV+ YEAAVCGG + +N +
Sbjct: 72 PLRVGMFGGGTVGGGVYEICEQDKKAFFQGLGCDSEIIKVCVRDSKKPRDYKMDPKTEVVTDYAAILDDDSINCVVELMGGVTDAKDVVFEAIRRNKHVVTANKALVAAYLGEIQELLKEHPGVTFGYEAAVCGGIPIIATLQNDY 217
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A7S4D8P3_HETAK (Homoserine dehydrogenase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8P3_HETAK) HSP 1 Score: 174 bits (441), Expect = 2.470e-49 Identity = 88/150 (58.67%), Postives = 112/150 (74.67%), Query Frame = 1
Query: 1 ITMPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSF 450
++ PL +GMFGGG VGGGVYEI + KK F+S+GAN+ I KICV+DA+K R F + ++T IVTD+ AIL D INCVIE+MGGTT AKDVV+ AI +GK V+TANKALLA++LP I+ LL +N GV +EAAVCGG + +N F
Sbjct: 75 LSPEPLIVGMFGGGTVGGGVYEICQK-KKQLFESLGANIKIKKICVKDATKSRDFKLDSNTEIVTDFNAILDDPEINCVIEVMGGTTAAKDVVYAAIGKGKHVVTANKALLAQHLPEIQELLAQNPGVKFGFEAAVCGGIPIIHTLQNDF 223
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK) HSP 1 Score: 167 bits (422), Expect = 4.990e-45 Identity = 86/148 (58.11%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 7 MPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSF 450
M L IGMFGGG VGGGVYEI + KKA F+S+GAN+ I ICVR KPR F V TTI TD+ AIL D INCV+E+MGGTT AKDVV+ AI +GK V+TANKALLA+YLP ++ LK + YEAAVCGG + +N +
Sbjct: 78 METLVIGMFGGGTVGGGVYEICQK-KKALFESLGANIRIKTICVRSLDKPRDFTVADGTTITTDFNAILDDDEINCVVEVMGGTTAAKDVVYAAIEKGKHVVTANKALLAQYLPELQARLKARPLLKFGYEAAVCGGIPIIHTLQNDY 224
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A6A4YYC0_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YYC0_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.520e-44 Identity = 83/153 (54.25%), Postives = 112/153 (73.20%), Query Frame = 1
Query: 1 ITMPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPR--SFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSFS 453
+T+ PLRIG+FG G VGGGV++I+E+ + AF +SIG N TI KICVR+A+KP + V G TTI T Y+ IL DSSINC++ELMGG T AKDVVF+AI++ K VITANKAL+A ++ + LL+ + V YEA+VCGG + ++S+S
Sbjct: 1 MTLVPLRIGLFGCGTVGGGVFQILES-RAAFLKSIGVNATIEKICVRNATKPELVALVKGHSTTITTKYDDILDDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVANHMTELNELLQAHPTVRFGYEASVCGGIPIIHTLQSSYS 152
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A3R6YZ54_9STRA (Homoserine dehydrogenase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZ54_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.470e-43 Identity = 82/153 (53.59%), Postives = 110/153 (71.90%), Query Frame = 1
Query: 1 ITMPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPR--SFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSFS 453
+T+ LRIG+FG G VGGGV++I+E+ + F +SIG N TI KICVR+A+KP + V G TTI T Y+ IL DSSINC++ELMGG T AKDVVF+AI++ K VITANKAL+A Y+ + LL+ + V YEA+VCGG + ++S+S
Sbjct: 1 MTVGALRIGLFGCGTVGGGVFQILES-RATFLKSIGVNATIEKICVRNATKPELVALVQGHSTTITTKYDDILEDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVASYMTELSDLLQAHPTVRFGYEASVCGGIPIIHTLQSSYS 152
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A3R7Z5R8_9STRA (Homoserine dehydrogenase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A3R7Z5R8_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.350e-42 Identity = 83/153 (54.25%), Postives = 112/153 (73.20%), Query Frame = 1
Query: 1 ITMPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPR--SFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKENAGVSLAYEAAVCGGAYAVRFTRNSFS 453
+T+ PLRIG+FG G VGGGV++I+E+ + AF +SIG N TI KICVR+A+KP + V G TTI T Y+ IL DSSINC++ELMGG T AKDVVF+AI++ K VITANKAL+A ++ + LL+ + V YEA+VCGG + ++S+S
Sbjct: 21 MTLVPLRIGLFGCGTVGGGVFQILES-RAAFLKSIGVNATIEKICVRNATKPELVALVKGHSTTITTKYDDILDDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVANHMTELNELLQAHPTVRFGYEASVCGGIPIIHTLQSSYS 172
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Match: A0A7S2EQA9_9STRA (Homoserine dehydrogenase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EQA9_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.640e-42 Identity = 79/149 (53.02%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 16 LRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPRSFVVGAHTTIVTDYEAILGDSSINCVIELMGGTTHAKDVVFEAIRRGKSVITANKALLAEYLPTIRTLLKE----NAGVSLAYEAAVCGGAYAVRFTRNSF 450
LR+G+FGGG VGGG+ EI++ K F + N+ + KICVRDASKPR F V + T IVT+Y+ IL D I+ V+E+MGGTT AKD+VF A+R+GK V+TANKAL+A YLP I +L+E + V YEAAVCGG +R ++ F
Sbjct: 21 LRLGIFGGGTVGGGIVEIIQQKAKYFNELTTQNIDVRKICVRDASKPRDFTVPSTTEIVTNYDDILNDDEIDVVVEVMGGTTDAKDIVFSALRKGKDVVTANKALIAAYLPEIEAILEEVNSDGSRVEFRYEAAVCGGIPVIRSLQSDF 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5420.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5420.1.1 >prot_P-wetherbeei_contig5420.1.1 ID=prot_P-wetherbeei_contig5420.1.1|Name=mRNA_P-wetherbeei_contig5420.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MPPLRIGMFGGGVVGGGVYEIVETVKKAFFQSIGANVTIVKICVRDASKPback to top mRNA from alignment at P-wetherbeei_contig5420:2870..3848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5420.1.1 ID=mRNA_P-wetherbeei_contig5420.1.1|Name=mRNA_P-wetherbeei_contig5420.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=979bp|location=Sequence derived from alignment at P-wetherbeei_contig5420:2870..3848+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5420:2870..3848+ >mRNA_P-wetherbeei_contig5420.1.1 ID=mRNA_P-wetherbeei_contig5420.1.1|Name=mRNA_P-wetherbeei_contig5420.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig5420:2870..3848+ (Phaeothamnion wetherbeei SAG_119_79)back to top |