mRNA_P-wetherbeei_contig542.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A6H5JPJ5_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPJ5_9PHAE) HSP 1 Score: 303 bits (775), Expect = 2.420e-92 Identity = 142/214 (66.36%), Postives = 171/214 (79.91%), Query Frame = 1
Query: 37 HRKRNGRDRWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGNKGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAEIVFQREDLDIKDEAWQHFNFESKVDVALAAVRGKIVVTNPDEPPPRKGRPPRKR 678
+R++ + RWSA ED QL V +NG NW+ VA IPGKT+MQCFHRW+K +N G KGPWS EDD RV ELVGQ GA+KWS IAAQLPGRTGKQCRERWHNHLNP +SK PW+E ED TI+ QH++ GNKWA+IAK++PGRTDNA+KNHWNSSMKRKAEIVF R DL ++ F++ +D+ALAAVRG+I V+NP+EP R+GRPPRKR
Sbjct: 112 YRRKPIKTRWSAAEDAQLKKLVDSNGSGNWRVVADSIPGKTDMQCFHRWTKVFNGGTKGPWSPEDDARVAELVGQIGAKKWSCIAAQLPGRTGKQCRERWHNHLNPHISKVPWSEHEDHTILIQHQKLGNKWAEIAKVMPGRTDNAIKNHWNSSMKRKAEIVFARTDLTPSSPEFEGHGFKNVIDIALAAVRGRITVSNPNEPATRRGRPPRKR 325
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA) HSP 1 Score: 218 bits (556), Expect = 9.970e-68 Identity = 98/153 (64.05%), Postives = 119/153 (77.78%), Query Frame = 1
Query: 61 RWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYN-EGNKGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAE 516
RW+ EEDE+L I V+ NG KNWK++A P +TE+QC HRW K N E KGPW+AE+D +V ELV +G +KW+ IA LPGR GKQCRERWHNHLNP +SK W+E+EDR I+E H + GN+WA+IAK LPGRTDNA+KNHWNSSMKRK E
Sbjct: 35 RWTTEEDEKLKIAVARNGAKNWKKIAEAFPDRTEVQCLHRWQKVLNPELVKGPWTAEEDAKVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRKIE 187
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA) HSP 1 Score: 214 bits (544), Expect = 3.840e-66 Identity = 95/153 (62.09%), Postives = 117/153 (76.47%), Query Frame = 1
Query: 61 RWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGN-KGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAE 516
+W+ EDE L V +G KNWK ++ +PG++E+QC HRW K KGPW+AE+D +V ELV ++GA+KWS IA LPGR GKQCRERWHNHLNPD+SK W E+EDRTI+E H GN+WA+IAKMLPGRTDNA+KNHWNSSM+RK E
Sbjct: 26 KWTKHEDETLKEAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIE 178
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: B8CFV0_THAPS (MYB DNA binding protein/ transcription factor-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFV0_THAPS) HSP 1 Score: 211 bits (536), Expect = 3.230e-65 Identity = 95/152 (62.50%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 64 WSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGN-KGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAE 516
WSAEEDE L V NGPKNWK +A +P +TE+QC HRW K KGPW+ E+D V LV +YGA+KWS IA+ LPGR GKQCRERWHNHLNP +S+ W+ EEDRTI++ H GN+WA+I+K+LPGRTDNA+KNHWNSSMK+K E
Sbjct: 1 WSAEEDEALRNAVERNGPKNWKLIAKHLPQRTEVQCLHRWQKVLKPSLVKGPWTPEEDHLVLRLVQKYGAKKWSLIASHLPGRIGKQCRERWHNHLNPGISRGAWSFEEDRTILQFHENVGNRWAEISKLLPGRTDNAIKNHWNSSMKKKIE 152
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A7S1B5E6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5E6_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.920e-64 Identity = 108/191 (56.54%), Postives = 134/191 (70.16%), Query Frame = 1
Query: 61 RWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGN-KGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAEIVFQR----EDLDIKDEAWQHFNFESKVDVALAAVRGK 618
+W+ EED+ L V NG KNWK +A + +TE+QC HRW K KGPW+AE+D +V ELV QYGA+KWS IA+ LPGR GKQCRERWHNHLNPD+ K WT EEDRTI+E H+ GN+WA+IAKMLPGRTDNA+KNHWNSSM+RK E + ++ I+ F+F +D LA+VRGK
Sbjct: 131 KWTKEEDDALRAAVEENGAKNWKLIAERLQDRTEVQCLHRWQKVLKPTLVKGPWTAEEDRKVIELVAQYGAKKWSLIASNLPGRIGKQCRERWHNHLNPDICKEAWTIEEDRTILEAHQALGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLAKKQGCDESHIRYLEDGRFDFMGDIDGVLASVRGK 321
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A7S0XPS0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XPS0_9STRA) HSP 1 Score: 225 bits (573), Expect = 5.010e-64 Identity = 105/191 (54.97%), Postives = 137/191 (71.73%), Query Frame = 1
Query: 61 RWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGN-KGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAEIVFQR----EDLDIKDEAWQHFNFESKVDVALAAVRGK 618
+W+ +ED+ L V +G KNWK ++ +PG++E+QC HRW K KGPW+AE+D +V ELV +YGA+KWSQIA +LPGR GKQCRERWHNHLNP++SK W E+EDRTI+E H GN+WA+IAKMLPGRTDNA+KNHWNSSM+RK E R ++ +I+ F+F +D L AVRG+
Sbjct: 181 KWTKQEDDTLRDAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKYGAKKWSQIAQELPGRIGKQCRERWHNHLNPEISKEAWKEDEDRTILESHVTLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRKIEKYLSRKQGVDERNIRYTEDGRFDFMGDLDGVLNAVRGR 371
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A7S2UPF5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPF5_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.320e-63 Identity = 105/196 (53.57%), Postives = 133/196 (67.86%), Query Frame = 1
Query: 100 VSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYNEGN-KGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAEIVFQR----EDLDIKDEAWQHFNFESKVDVALAAVRGKIVVTNPDEPPPRKGRPPR 672
V NG KNWK ++ +P +TE+QC HRW K KGPW+A++D +V ELV +YGA+KWS IA+ LPGR GKQCRERWHNHLNPD+ K W EEDRTI++ H GN+WA+IAKML GRTDNA+KNHWNSSMKRK E R ++ I+ F+F ++ LAAVRGK + P +P +K + PR
Sbjct: 1 VEENGAKNWKLISQRLPDRTEVQCLHRWQKVLKPTLVKGPWTADEDKKVMELVQKYGAKKWSLIASHLPGRIGKQCRERWHNHLNPDICKEAWQVEEDRTILDAHMNLGNRWAEIAKMLSGRTDNAIKNHWNSSMKRKIEKYLARRQGCDESQIRYMDDGRFDFMGDLEGVLAAVRGKDGMRRP-KPSGKKTKKPR 195
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A7S2BE35_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE35_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.030e-62 Identity = 112/209 (53.59%), Postives = 139/209 (66.51%), Query Frame = 1
Query: 61 RWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYN-EGNKGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAEI---------VFQREDLDIKDEAWQHFNFESKVDVALAAVRGKIVVTNPDEPPPRK 657
RWS EEDE+L V N KNWK++A +TE+QC HRW K N E KGPW+ E+D +VR+LV QYGA+KWS IA+ LPGR GKQCRERWHNHLNPD+ K+PWTE EDR I+E H++ GN+WA+IAK L GRTDNA+KNHWNSSMKRK E V + L ++ ++F+ + L AVR K EP P+K
Sbjct: 177 RWSPEEDEKLKKAVHINDAKNWKRIAESFVDRTEVQCLHRWQKVLNPELVKGPWTTEEDGQVRDLVTQYGAKKWSVIASHLPGRIGKQCRERWHNHLNPDIKKKPWTENEDRIILEAHQRLGNRWAEIAKKLDGRTDNAIKNHWNSSMKRKIEKFLALKLGIPVDDKSPLPTSEDG--QYDFQGDITGVLNAVRKKTTKVV-KEPKPKK 382
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: P10242-12 (Isoform 12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12) HSP 1 Score: 208 bits (529), Expect = 6.240e-62 Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 34 SHRKRNGRDRWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYN-EGNKGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAE 516
S ++ G+ RW+ EEDE+L V NG +WK +A +P +T++QC HRW K N E KGPW+ E+D RV ELV +YG ++WS IA L GR GKQCRERWHNHLNP+V K WTEEEDR I + H++ GN+WA+IAK+LPGRTDNA+KNHWNS+M+RK E
Sbjct: 33 SGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Match: A0A2K6U084_SAIBB (MYB proto-oncogene, transcription factor n=4 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6U084_SAIBB) HSP 1 Score: 208 bits (529), Expect = 1.040e-61 Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 34 SHRKRNGRDRWSAEEDEQLLIGVSTNGPKNWKQVALGIPGKTEMQCFHRWSKKYN-EGNKGPWSAEDDVRVRELVGQYGARKWSQIAAQLPGRTGKQCRERWHNHLNPDVSKRPWTEEEDRTIIEQHRQRGNKWADIAKMLPGRTDNAVKNHWNSSMKRKAE 516
S ++ G+ RW+ EEDE+L V NG +WK +A +P +T++QC HRW K N E KGPW+ E+D RV ELV +YG ++WS IA L GR GKQCRERWHNHLNP+V K WTEEEDR I + H++ GN+WA+IAK+LPGRTDNA+KNHWNS+M+RK E
Sbjct: 31 SGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig542.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig542.1.2 >prot_P-wetherbeei_contig542.1.2 ID=prot_P-wetherbeei_contig542.1.2|Name=mRNA_P-wetherbeei_contig542.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=303bp GGGGGGTGVRGSHRKRNGRDRWSAEEDEQLLIGVSTNGPKNWKQVALGIPback to top mRNA from alignment at P-wetherbeei_contig542:134..5369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig542.1.2 ID=mRNA_P-wetherbeei_contig542.1.2|Name=mRNA_P-wetherbeei_contig542.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5236bp|location=Sequence derived from alignment at P-wetherbeei_contig542:134..5369- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig542:134..5369- >mRNA_P-wetherbeei_contig542.1.2 ID=mRNA_P-wetherbeei_contig542.1.2|Name=mRNA_P-wetherbeei_contig542.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=909bp|location=Sequence derived from alignment at P-wetherbeei_contig542:134..5369- (Phaeothamnion wetherbeei SAG_119_79)back to top |