mRNA_P-wetherbeei_contig54182.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54182.1.1
Unique NamemRNA_P-wetherbeei_contig54182.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A1T4R2B8_9HYPH (Uncharacterized membrane protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4R2B8_9HYPH)

HSP 1 Score: 166 bits (419), Expect = 9.030e-48
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 2 
Query:   38 VIAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQRDRAWPREI 328
            +IAEHYLKRW+ AGL+DD AV RISAWEATHRRP+WLWALSG GALAIGLGVVA+VAANWE IP   KL+G +LLTGL A  VFVAW RDRAWPREI
Sbjct:    1 MIAEHYLKRWQGAGLIDDAAVERISAWEATHRRPIWLWALSGTGALAIGLGVVAMVAANWEDIPAAVKLSGAMLLTGLVAAFVFVAWLRDRAWPREI 97
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A5C8PAW4_9HYPH (DUF2157 domain-containing protein n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PAW4_9HYPH)

HSP 1 Score: 115 bits (288), Expect = 1.870e-28
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 2 
Query:   38 VIAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQRDRAWPREI 328
            + A  YL RWRSAGL+DD A  RI++WE     P+WLWAL+G+GA A+G+GV+A+VAANWE IP   K+A  L L    A+ VFVAWQR     REI
Sbjct:    3 MFANRYLARWRSAGLIDDAAAQRIASWERAQAHPVWLWALAGLGAFAVGMGVLALVAANWERIPGWLKIASSLSLDVAVAVAVFVAWQRGWEKTREI 99
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A5C5THS4_9HYPH (DUF2157 domain-containing protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5THS4_9HYPH)

HSP 1 Score: 103 bits (256), Expect = 7.450e-24
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 2 
Query:   38 VIAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQRDRAWPREI 328
            + A  YL RW+ AGL+D     RI  WE    RP+WLWAL+G+GA AIG+GV+AVVAANWE IP   K+  +L L    A  +FV+WQR     REI
Sbjct:    1 MFANRYLSRWQGAGLIDAAGAQRIVDWERAQARPVWLWALAGLGAFAIGMGVLAVVAANWERIPGWLKITVNLALNVGAAAALFVSWQRGWEKTREI 97
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: UPI001BA7AB90 (DUF2157 domain-containing protein n=1 Tax=Leptolyngbya sp. 15MV TaxID=2819933 RepID=UPI001BA7AB90)

HSP 1 Score: 97.8 bits (242), Expect = 6.500e-23
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 2 
Query:   41 IAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAW-----QRDRAWPRE 325
            ++E  L+ WR AGL+D     RI AWEA H RPL LWA  G+GALAIGLGVV++VAANWE +P   +LA  L+L  + A+  F+ W     +R+  W  E
Sbjct:    1 MSERKLRAWREAGLIDGATAARILAWEADHARPLGLWAAIGIGALAIGLGVVSLVAANWEDVPGVVRLALHLVL--IAALAAFIGWRGTQLEREHPWALE 98
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: Q2N778_ERYLH (DUF2157 domain-containing protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) TaxID=314225 RepID=Q2N778_ERYLH)

HSP 1 Score: 97.8 bits (242), Expect = 8.290e-22
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 2 
Query:   41 IAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDL-LLTGLCAIIVFVAW-----QRDRAWPRE 325
            + E  L+ WR AGL+DD AV RI A+E  H RPL LWA+ G+GALAIGLGV++VVAANWE +P   +LA  L L TGL     F+ W     +R++ W  E
Sbjct:   20 MGERKLREWREAGLIDDAAVARILAYEEEHSRPLLLWAVIGIGALAIGLGVISVVAANWEDVPGKVRLAIHLALFTGLAG---FIGWRGGRLEREQPWGLE 117
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BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A1F9ZXS3_9SPHN (DUF2157 domain-containing protein n=1 Tax=Erythrobacter sp. RIFCSPHIGHO2_12_FULL_63_10 TaxID=1797975 RepID=A0A1F9ZXS3_9SPHN)

HSP 1 Score: 93.6 bits (231), Expect = 1.970e-20
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 2 
Query:   41 IAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQ---RDRAWPRE 325
            ++E  L  WR AGL+D+    RI A+EA H RPL LWA  G+GALAIGLGV++V+AANWE +P   +LA  L+L G+ A  + +  +   RD  W  E
Sbjct:    1 MSERKLIAWREAGLIDEATAQRIRAYEAEHARPLALWAAIGLGALAIGLGVISVIAANWEDVPGLVRLAFHLVLIGVLAAFIMIRGEGIERDHPWWLE 98
[Close]
BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: F6F2H4_SPHCR (DUF2157 domain-containing protein n=2 Tax=Sphingobium chlorophenolicum TaxID=46429 RepID=F6F2H4_SPHCR)

HSP 1 Score: 92.8 bits (229), Expect = 5.110e-20
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 2 
Query:   41 IAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDL-LLTGLCAII 283
            ++E  L+ W+ AGL+D G  GRI  WEA H RPL LWA+ G+GALAIGLG+V+VVAANW++IP   +LA    L+ GL  ++
Sbjct:    1 MSERRLRAWQDAGLIDAGTAGRIREWEAAHHRPLGLWAIIGLGALAIGLGIVSVVAANWDAIPGETRLAIHFALMVGLACLL 82
[Close]
BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A259K2F5_9SPHN (DUF2157 domain-containing protein n=1 Tax=Erythrobacter sp. 34-65-8 TaxID=1970335 RepID=A0A259K2F5_9SPHN)

HSP 1 Score: 92.4 bits (228), Expect = 6.740e-20
Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 2 
Query:   41 IAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLL-TGLCAIIVFV--AWQRDRAWPRE 325
            ++E  L+ W++AGL+D     RI AWEA H RPL LWA  G+GALAIGLG+++VVAANWE +P   +LA  LLL  GL   +     A +RD  W  E
Sbjct:    1 MSERKLQAWQAAGLIDRETATRIRAWEAAHSRPLGLWAAIGIGALAIGLGIISVVAANWEEVPGTLRLALHLLLMAGLGGFLALRGDALERDHPWELE 98
[Close]
BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: A0A219B1J9_9SPHN (DUF2157 domain-containing protein n=1 Tax=Pacificimonas flava TaxID=1234595 RepID=A0A219B1J9_9SPHN)

HSP 1 Score: 91.3 bits (225), Expect = 1.590e-19
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 2 
Query:   47 EHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQ-RDRAWP 319
            E  L  WR  GL+D  A  +I A+EA   RP+WLWA++G+GALA+ LG+VA++AANW+ IP   KL    LL    A     AWQ R++ WP
Sbjct:    4 EDRLADWRQQGLIDSAAAEKIRAYEAERARPVWLWAMAGLGALALALGIVALIAANWQDIPKAVKLGVHALLLAAAA---GTAWQAREKGWP 92
[Close]
BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Match: UPI001CC93076 (DUF2157 domain-containing protein n=1 Tax=Sphingobium sp. 3R8 TaxID=2874921 RepID=UPI001CC93076)

HSP 1 Score: 90.1 bits (222), Expect = 5.570e-19
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 2 
Query:   32 LLVIAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALAIGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQRDR 310
            L  ++E  L+ W++AGL+D      I AWEA H RP+ +WA+ G+GAL IGLG+V++VAANWE+IP  A+LA    +  + A+  ++ WQ  R
Sbjct:   17 LPAMSERKLRAWQAAGLIDAETASAIGAWEAAHSRPIGVWAIVGLGALTIGLGLVSIVAANWEAIPGTARLAIHFAI--MAALAAWIGWQLPR 107
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54182.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1T4R2B8_9HYPH9.030e-4879.38Uncharacterized membrane protein n=1 Tax=Enhydroba... [more]
A0A5C8PAW4_9HYPH1.870e-2855.67DUF2157 domain-containing protein n=2 Tax=Vineibac... [more]
A0A5C5THS4_9HYPH7.450e-2451.55DUF2157 domain-containing protein n=1 Tax=Reyranel... [more]
UPI001BA7AB906.500e-2349.00DUF2157 domain-containing protein n=1 Tax=Leptolyn... [more]
Q2N778_ERYLH8.290e-2251.49DUF2157 domain-containing protein n=1 Tax=Erythrob... [more]
A0A1F9ZXS3_9SPHN1.970e-2047.96DUF2157 domain-containing protein n=1 Tax=Erythrob... [more]
F6F2H4_SPHCR5.110e-2053.66DUF2157 domain-containing protein n=2 Tax=Sphingob... [more]
A0A259K2F5_9SPHN6.740e-2050.00DUF2157 domain-containing protein n=1 Tax=Erythrob... [more]
A0A219B1J9_9SPHN1.590e-1947.83DUF2157 domain-containing protein n=1 Tax=Pacifici... [more]
UPI001CC930765.570e-1945.16DUF2157 domain-containing protein n=1 Tax=Sphingob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54182contigP-wetherbeei_contig54182:202..532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog314225.ELI_11855
PFAMsDUF2157
Model size331
Max annot lvl204457|Sphingomonadales
Hectar predicted targeting categorysignal anchor
Exons1
Evalue9.66e-23
EggNOG OGsCOG4872@1|root,COG4872@2|Bacteria,1N4JN@1224|Proteobacteria,2UE2X@28211|Alphaproteobacteria,2K8KQ@204457|Sphingomonadales
DescriptionPredicted membrane protein (DUF2157)
Cds size303
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186809.925544-UTR-P-wetherbeei_contig54182:201..2291683186809.925544-UTR-P-wetherbeei_contig54182:201..229Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig54182 202..229 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186809.9376493-CDS-P-wetherbeei_contig54182:229..5321683186809.9376493-CDS-P-wetherbeei_contig54182:229..532Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54182 230..532 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54182.1.1prot_P-wetherbeei_contig54182.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54182 230..532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54182.1.1

>prot_P-wetherbeei_contig54182.1.1 ID=prot_P-wetherbeei_contig54182.1.1|Name=mRNA_P-wetherbeei_contig54182.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
MLLVIAEHYLKRWRSAGLLDDGAVGRISAWEATHRRPLWLWALSGMGALA
IGLGVVAVVAANWESIPLGAKLAGDLLLTGLCAIIVFVAWQRDRAWPREI
G
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mRNA from alignment at P-wetherbeei_contig54182:202..532+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54182.1.1 ID=mRNA_P-wetherbeei_contig54182.1.1|Name=mRNA_P-wetherbeei_contig54182.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=331bp|location=Sequence derived from alignment at P-wetherbeei_contig54182:202..532+ (Phaeothamnion wetherbeei SAG_119_79)
CTTGTGGCCTGCTACCCATTGCGTGAAGATGCTTTTAGTGATTGCAGAGC
ACTACCTGAAGCGGTGGCGGAGCGCCGGCCTGCTCGACGATGGCGCGGTA
GGGCGCATCAGCGCCTGGGAGGCCACGCATCGCCGACCGCTCTGGCTGTG
GGCGCTATCGGGCATGGGTGCGCTGGCCATCGGTCTTGGCGTGGTGGCGG
TGGTTGCTGCCAACTGGGAAAGTATTCCACTCGGGGCCAAACTCGCTGGC
GATCTGCTGCTCACCGGTTTGTGTGCGATCATCGTGTTTGTCGCCTGGCA
GCGCGACCGCGCATGGCCGCGTGAAATCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54182:202..532+

>mRNA_P-wetherbeei_contig54182.1.1 ID=mRNA_P-wetherbeei_contig54182.1.1|Name=mRNA_P-wetherbeei_contig54182.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig54182:202..532+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTTTAGTGATTGCAGAGCACTACCTGAAGCGGTGGCGGAGCGCCGG
CCTGCTCGACGATGGCGCGGTAGGGCGCATCAGCGCCTGGGAGGCCACGC
ATCGCCGACCGCTCTGGCTGTGGGCGCTATCGGGCATGGGTGCGCTGGCC
ATCGGTCTTGGCGTGGTGGCGGTGGTTGCTGCCAACTGGGAAAGTATTCC
ACTCGGGGCCAAACTCGCTGGCGATCTGCTGCTCACCGGTTTGTGTGCGA
TCATCGTGTTTGTCGCCTGGCAGCGCGACCGCGCATGGCCGCGTGAAATC
GGC
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