mRNA_P-wetherbeei_contig5416.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig5416.1.1
Unique Name	mRNA_P-wetherbeei_contig5416.1.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A7S3XTG0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG0_HETAK)

HSP 1 Score: 207 bits (528), Expect = 4.320e-60
Identity = 112/212 (52.83%), Postives = 149/212 (70.28%), Query Frame = 2

Query:  440 ISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLA--SHDQDQASVLEDYMEEVWRDRIMRGQISLL 1069
            ISDGSELLLLVP++AGIVGSV+LP+LGAVPDGAIVLFSG+G DAQ QL VGVGALAGSTIMLLT+PWFLSV AGRVSID+   +    +P       KL P  + SL  TGV  +P++  GG LM++T++SYL+IQ PA  + G+   E+ A E+ +ALAG++  L FF  YL+YQW L+  SH+  +        E + ++ + +G + ++
Sbjct:   26 ISDGSELLLLVPSLAGIVGSVILPILGAVPDGAIVLFSGMGPDAQEQLSVGVGALAGSTIMLLTLPWFLSVLAGRVSIDKDNKLTYTSKP-------KLVPGEENSLTRTGVDCAPEISKGGALMMITSMSYLVIQLPALSFEGESSAEIGADENGYALAGLLLTLFFFCAYLWYQWRLSQGSHEPSELG-----RERIIKEHMNKGMVGIV 225

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A0L0DBP1_THETB (Ca2:Cation Antiporter family n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DBP1_THETB)

HSP 1 Score: 208 bits (529), Expect = 3.420e-58
Identity = 124/217 (57.14%), Postives = 151/217 (69.59%), Query Frame = 2

Query:  428 THQMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYS----GDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
            +  MISDGSELLLLVP++AGIVGSVVLP+LGAVPDGAIVLFSGLG DAQ QL VGVGALAGSTIMLLTIPWFLS+ AGRVS+DR  G   YK PA     AKL+P G  SL  TGV   P + I G +M++T+L+Y+IIQGPAF  S     DD+   S GE  +A AG+I     F+GYL+YQ  + + D +Q+   +D ++   +  I    ISL
Sbjct:  106 SSNMISDGSELLLLVPSLAGIVGSVVLPILGAVPDGAIVLFSGLGPDAQKQLSVGVGALAGSTIMLLTIPWFLSILAGRVSLDRN-GKGAYKAPAG----AKLSPPGSMSLTRTGVNCGPSIAIAGKIMVITSLAYIIIQGPAFGLSCGLKSDDNKCKSKGERWWAFAGLIYAFLSFVGYLWYQ--VKTSDDEQS---KDKVDATRKKAIQASMISL 312

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A0G4GBW8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GBW8_VITBC)

HSP 1 Score: 206 bits (524), Expect = 1.110e-57
Identity = 116/212 (54.72%), Postives = 151/212 (71.23%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANS-PDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +IS+GSELLLLVP++AG+VGSVVLPVLGAVPDGAIVLFSGLG DAQ QL VGVGALAGSTIMLLTIPWFLS+  GRV++  + G  TYK+P ++ PDW KL P  + SL  TGV  +  + + G +M+LTA++YL+IQ PAF    D   +  + E  FA +GM+  +  F+ YL YQ+W A  + +Q  VLED + E+ R  +  G ++L
Sbjct:   41 NLISEGSELLLLVPSLAGLVGSVVLPVLGAVPDGAIVLFSGLGPDAQEQLSVGVGALAGSTIMLLTIPWFLSIVGGRVNVLES-GELTYKKPKDADPDWKKLDPPNNWSLTQTGVKCNKSIAVNGKIMLLTAITYLVIQIPAFAVIHDTIEQKRSFERWFAFSGMLIAIVCFVLYLVYQFWQAKGEHNQ--VLEDEIIELRRKALKDGMLTL 249

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A7S3PG68_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PG68_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.500e-57
Identity = 116/215 (53.95%), Postives = 149/215 (69.30%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPD-WAKLTPSGDAS--LYYTGVTGSPQLKIGGGL-MILTALSYLIIQGPAFLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +ISDGSELLLL+P++A IVGSVVLP+LGAVPDGAIVLFSGLG +AQ QL VGVGALAGSTIMLLTIPW LS++AGRV+I+ + G CTY++PA++PD W KL+ +      L  TGV  + +    G L MILTA+ YLIIQG AF + GD + ++++ E  +AL G+I C   F  YLY Q      +     VLED ++    D +  G +SL
Sbjct:   62 NLISDGSELLLLIPSIAPIVGSVVLPILGAVPDGAIVLFSGLGPNAQDQLTVGVGALAGSTIMLLTIPWALSIWAGRVNIN-SKGQCTYRKPASAPDKWRKLSKNRTRHDMLNRTGVEPNYEAMSSGALTMILTAIPYLIIQGAAFEFEGDSEEKIASEEKYYALVGLIFCTIAFFSYLYIQ----VRNSRTNQVLEDVVDSKRMDALKHGLLSL 271

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A0G4FE07_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FE07_9ALVE)

HSP 1 Score: 203 bits (516), Expect = 1.390e-56
Identity = 115/212 (54.25%), Postives = 150/212 (70.75%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSP-DWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +IS GSELLLLVP++AG+VGSVVLP+LGAVPDGAIVLFSG+G +AQ +L+VGVGALAGSTIML TIPWFLS+  GRV+I+   G CTY +PA +P  W+KL+P G+ S + TGV     + +   +++LTALSYLIIQ PAF  SG  +      ++ FALAGMI     F+ YL YQ  +AS    Q+ V+ED + E  +  I  G+++L
Sbjct:   40 NLISSGSELLLLVPSLAGLVGSVVLPILGAVPDGAIVLFSGIGENAQEELKVGVGALAGSTIMLFTIPWFLSIMGGRVNIEN--GQCTYTKPAGAPVGWSKLSPPGNFSPWKTGVECEASIGVNAKIVMLTALSYLIIQLPAFYSSGVPEYVARDFQNGFALAGMIVTFLAFVAYLIYQARVAS----QSKVVEDRILETQKSAISSGKLNL 245

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A662WTV5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTV5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 4.560e-55
Identity = 116/218 (53.21%), Postives = 146/218 (66.97%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGD-------DDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +ISDGSELLLLVP++AGIVGSVVLPVLGAVPDGAIVLFSG+G DAQ Q+ VGVGALAGSTIMLLTIPW LSV+AGRV+ID   G   Y RP N P+W+KL P+G+  L+ TGV    ++      MI T++ YLI+Q PA  Y+G        D+T+V+  E  FA+   I  +  F  YLY+      + Q  + V ED ++E+    I  G+ISL
Sbjct:   72 NLISDGSELLLLVPSMAGIVGSVVLPVLGAVPDGAIVLFSGMGPDAQEQVSVGVGALAGSTIMLLTIPWALSVFAGRVNIDEN-GRGNYVRPKNDPNWSKLMPAGNRDLFKTGVVLFDEIPSTAKTMIATSMIYLILQVPALFYTGTASEDSKADNTKVARAEKPFAIIAFIVSMVAFFLYLYW------NVQRSSEVKEDVIDEIRVAAIRDGEISL 282

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A7S2RRV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RRV7_9STRA)

HSP 1 Score: 193 bits (490), Expect = 5.390e-55
Identity = 118/215 (54.88%), Postives = 143/215 (66.51%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLG--SDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANS-PDWAKLTPSGDASLYYTGV-TGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             MI+DGSELLLL+P +A IVGSVV+P+LGAVPDGA+VLFSGLG  S AQ QL VGVGALAGSTIMLLT+PW LSV AGRVSI R  G CTYKRPAN+  DW KL+         +GV      ++ G   M +T  SY+IIQG AF YS  D  +V   E  FAL G+I C   FM YLY Q  +++ + DQ  VL+D ++E     +  G +SL
Sbjct:   61 NMIADGSELLLLIPEMAPIVGSVVIPILGAVPDGAVVLFSGLGERSKAQEQLSVGVGALAGSTIMLLTVPWTLSVLAGRVSIVR--GRCTYKRPANAGEDWKKLSDKHARDWSKSGVGPAQSAMRAGARTMAITCASYIIIQGAAFAYSDPDPVKVGIHEKYFALVGLILCFVLFMWYLYEQ--VSNSNSDQ--VLQDIVDEKREAALKSGILSL 269

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A2D4CG72_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CG72_PYTIN)

HSP 1 Score: 198 bits (503), Expect = 6.910e-55
Identity = 116/219 (52.97%), Postives = 151/219 (68.95%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPD-WAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTE-------VSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +ISDGSELLLLVP++AGIVGSVVLPVLGAVPDGAIVLFSG+G DAQ Q+ VGVGALAGSTIMLLTIPW LSV+AGRV+++   G   Y RP N+P+ WAKLTP G+ +L+ TGV    +++     MI T+L YLI+Q PA  Y+G  D +       V+A E  FA    +  +A F+GYLY+      + +  + V E+ ++EV    I +G++SL
Sbjct:   37 NLISDGSELLLLVPSMAGIVGSVVLPVLGAVPDGAIVLFSGMGPDAQEQVSVGVGALAGSTIMLLTIPWALSVFAGRVNLNEK-GQGNYIRPRNAPEGWAKLTPPGNMNLWSTGVVVFDEIRSNARTMIATSLIYLILQIPALQYTGTVDRDATADHSVVAAAERPFAFVAFLVSMAAFVGYLYW------NVKRTSKVAENAIDEVRVAAIRKGEVSL 248

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A0P1AKD8_PLAHL (Ca2: cation antiporter family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKD8_PLAHL)

HSP 1 Score: 197 bits (501), Expect = 1.320e-54
Identity = 117/218 (53.67%), Postives = 145/218 (66.51%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGD-------DDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWRDRIMRGQISL 1066
             +ISDGSELLLLVP++AGIVGSVVLPVLGAVPDGAIVLFSG+G DAQ Q+ VGVGALAGSTIMLLTIPW LSVYAGRV+ID   G   Y RP     WAKLTP G+ SL  TG+    ++     +MI TA+ YLI+Q PA  Y+G        D+T+V+  E  FA+   +  +  F+ YLY+      + Q  + V +D ++EV    I  G+ISL
Sbjct:   37 NLISDGSELLLLVPSMAGIVGSVVLPVLGAVPDGAIVLFSGMGPDAQQQVSVGVGALAGSTIMLLTIPWALSVYAGRVNIDEN-GRGNYVRPKGDQHWAKLTPPGNKSLTKTGIILFDEIPSTARMMICTAMIYLILQLPALFYTGTIAKDAHADNTKVAKAERPFAIVAFVISMISFILYLYW------NVQRSSEVKDDIIDEVRVAAIRDGEISL 247

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BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Match: A0A7S2SXU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXU0_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.230e-54
Identity = 110/192 (57.29%), Postives = 134/192 (69.79%), Query Frame = 2

Query:  434 QMISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLEVGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKLTPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPA--FLYSGDDDTEVSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQAS 1003
             MISDGSELLLLVP+VAGIVGS VLPVLGAVPDG IVLFSGLG DAQ QL+VGVGALAGSTIML+T+PW LSVYAGRV ++    V  Y R               A    TGV  S  ++ GG +M++TA+SY+I+QGPA  F   G D  +V+ G+ +FAL G+I CL FF GYLYYQW L+ +  ++ +
Sbjct:   39 NMISDGSELLLLVPSVAGIVGSCVLPVLGAVPDGMIVLFSGLGPDAQQQLDVGVGALAGSTIMLITLPWALSVYAGRVDVEHNKAV--YTRNGKK-----------AQGRVTGVANSDSVRKGGLIMMVTAVSYIILQGPAVYFKSKGKDTDQVAQGQKSFALGGLILCLVFFFGYLYYQWRLSLNADNEVA 217

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5416.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3XTG0_HETAK	4.320e-60	52.83	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A0L0DBP1_THETB	3.420e-58	57.14	Ca2:Cation Antiporter family n=1 Tax=Thecamonas tr...	[more]
A0A0G4GBW8_VITBC	1.110e-57	54.72	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
A0A7S3PG68_9STRA	1.500e-57	53.95	Hypothetical protein n=1 Tax=Aplanochytrium stocch...	[more]
A0A0G4FE07_9ALVE	1.390e-56	54.25	Uncharacterized protein n=1 Tax=Chromera velia CCM...	[more]
A0A662WTV5_9STRA	4.560e-55	53.21	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A7S2RRV7_9STRA	5.390e-55	54.88	Hypothetical protein (Fragment) n=1 Tax=labyrinthu...	[more]
A0A2D4CG72_PYTIN	6.910e-55	52.97	Uncharacterized protein n=2 Tax=Pythium insidiosum...	[more]
A0A0P1AKD8_PLAHL	1.320e-54	53.67	Ca2: cation antiporter family n=1 Tax=Plasmopara h...	[more]
A0A7S2SXU0_9STRA	3.230e-54	57.29	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5416	contig	P-wetherbeei_contig5416:2..1771 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	529818.AMSG_06033T0
PFAMs	EF-hand_5,EF-hand_7,Na_Ca_ex
Model size	1069
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal peptide
GOs	GO:0000325,GO:0003674,GO:0005215,GO:0005432,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006816,GO:0006950,GO:0006970,GO:0008150,GO:0008324,GO:0009506,GO:0009628,GO:0009651,GO:0009987,GO:0015075,GO:0015077,GO:0015081,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030054,GO:0031090,GO:0033554,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055044,GO:0055065,GO:0055074,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071214,GO:0071470,GO:0071472,GO:0072507,GO:0072511,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0099516,GO:0104004
Exons	3
Evalue	1.19e-60
EggNOG OGs	28NP9@1\|root,2QV8Y@2759\|Eukaryota
Description	calcium:sodium antiporter activity
Cds size	633
COG category	S

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186809.4773293-CDS-P-wetherbeei_contig5416:1..67	1683186809.4773293-CDS-P-wetherbeei_contig5416:1..67	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5416 2..67 -
1683186809.488478-CDS-P-wetherbeei_contig5416:315..710	1683186809.488478-CDS-P-wetherbeei_contig5416:315..710	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5416 316..710 -
1683186809.4981177-CDS-P-wetherbeei_contig5416:1163..1335	1683186809.4981177-CDS-P-wetherbeei_contig5416:1163..1335	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig5416 1164..1335 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186809.5079625-UTR-P-wetherbeei_contig5416:1335..1771	1683186809.5079625-UTR-P-wetherbeei_contig5416:1335..1771	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig5416 1336..1771 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5416.1.1	prot_P-wetherbeei_contig5416.1.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig5416 2..1335 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig5416:2..1771-
coding sequence from alignment at P-wetherbeei_contig5416:2..1771-

protein sequence of mRNA_P-wetherbeei_contig5416.1.1

>prot_P-wetherbeei_contig5416.1.1 ID=prot_P-wetherbeei_contig5416.1.1|Name=mRNA_P-wetherbeei_contig5416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
MISDGSELLLLVPAVAGIVGSVVLPVLGAVPDGAIVLFSGLGSDAQSQLE
VGVGALAGSTIMLLTIPWFLSVYAGRVSIDRTTGVCTYKRPANSPDWAKL
TPSGDASLYYTGVTGSPQLKIGGGLMILTALSYLIIQGPAFLYSGDDDTE
VSAGEHNFALAGMITCLAFFMGYLYYQWWLASHDQDQASVLEDYMEEVWR
DRIMRGQISLL

mRNA from alignment at P-wetherbeei_contig5416:2..1771-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig5416.1.1 ID=mRNA_P-wetherbeei_contig5416.1.1|Name=mRNA_P-wetherbeei_contig5416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig5416:2..1771- (Phaeothamnion wetherbeei SAG_119_79)
ATCTTCATCACACCCTCTGACCTTCCTTCGGATGTCGGAGGTTTCATTCA
GCTACTCTTCCTGCTCGCTGTCTACGCGTACATTTTGTTCAGTGCATCCA
ACGCGAGTGGACTGATTACTCGACCTTTCAAAAAGGCTTCGCTTCTTTAT
GATTAGTCCGACTTCGGCGTGGGGCCCGTCTCGTGTCATTATCAATCGGG
CTTGCGCGGCGGGTCGTCAAATCTGGTTTTGTTAAGAACGACGGCAGTCG
GACTCGCCAGCGTTCTTTTCGGCAGCATCCAGCGCCGCAGATCTCTGTTT
GCTCAACTTTGGAGACTCGGTACAGGCCTTCAACGCTTGGTTCTAACGTT
GCGGGGGAAGCGTCTCTAAAACGGTAATCCTGTGGGAACCGCTTCTCATA
CTTTTCCTCCCTTCCCGATTCAAACTTACGCATCAGATGATTAGCGATGG
TTCGGAGTTGCTGCTGCTGGTGCCGGCGGTGGCGGGCATCGTGGGCAGCG
TCGTGTTGCCCGTGCTGGGGGCGGTGCCGGATGGTGCCATTGTTCTCTTT
TCGGGGCTCGGATCTGACGCGCAGTCGCAGCTGGAAGTCGGAGTGGGCGC
CCTCGCCGGTGAGGAAAAACGACATTCTGTTCTTAAAAGGCTGAACAGAT
ATGGCAATGGGTACACCCGTGAAGTGCGCCATGCATCAAAGCATCGGCCG
GCCTATTTTCCTCTTCTCTGCGAGTGCTATTTTTCGTTTCTCGTTAGATA
AGGGACGACCATTTAGAATCTGGCGAATCAAGCCAGGAAACGGGGCGCGG
CAGACCATCTCTGCCTCACCTCCGCCCCTCGTTGTTGCTTCCTCGGTTAT
GTTCCCCTCACCGCCGTTGTCCGCTGCCGCTACCGGCGTTGTTGATATCG
CCGCTATCGCGCTTGCTACTGCCCATCTGCGGCCATTTCCGTCATCGTGC
GGCTGCACCACCGTCACTACCCACCTCCATTTGCCGCTCCTCTTACCTGC
ACACAATTGAACTAACCGAACGAACAAACAAACAATGCAAAACTGCCCTC
TGAAAATGCAGGGTCGACCATCATGCTGCTGACCATTCCATGGTTCCTCA
GCGTCTACGCCGGCCGAGTCTCCATTGACCGCACGACGGGCGTTTGCACC
TACAAACGGCCCGCCAACAGCCCAGACTGGGCCAAGCTGACGCCATCGGG
CGATGCCTCCCTGTACTACACGGGCGTGACGGGATCGCCGCAGCTCAAGA
TCGGCGGCGGCCTCATGATCCTGACGGCGCTGTCGTACCTGATCATTCAG
GGCCCCGCGTTTCTGTACTCGGGGGACGACGACACGGAGGTGTCGGCGGG
GGAGCACAACTTTGCGCTGGCGGGCATGATCACATGCTTGGCGTTCTTCA
TGGGGTACCTCTACTACCAGTGGTGGCTCGCCTCGCACGACCAGGACCAG
GCGAGTGTATAGACTAGGGGAATGGCGATGAATGGATTTGGGAGGATTCG
CGATCGTTGTCGCATTTGGTTCGTCGGTACTGCCAGGTGTAAGCTTTTGT
GTGGTTGCGAAGGGATGACATTCCGCTTGCCCTTATGATGTTGCCGCTTA
GAACGTCCGAAAGGAGGGGTTTTACAAAGAAGAACGAACCTCTGTAACCG
CTGAAATCTTTTGCACACCCCTTTCGCCGTGTCACCTGAAATCCACCCCA
ACAGGTCCTGGAGGATTACATGGAGGAAGTGTGGCGCGACCGCATCATGC
GCGGCCAGATCTCGCTGCTC

Coding sequence (CDS) from alignment at P-wetherbeei_contig5416:2..1771-

>mRNA_P-wetherbeei_contig5416.1.1 ID=mRNA_P-wetherbeei_contig5416.1.1|Name=mRNA_P-wetherbeei_contig5416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig5416:2..1771- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTAGCGATGGTTCGGAGTTGCTGCTGCTGGTGCCGGCGGTGGCGGG
CATCGTGGGCAGCGTCGTGTTGCCCGTGCTGGGGGCGGTGCCGGATGGTG
CCATTGTTCTCTTTTCGGGGCTCGGATCTGACGCGCAGTCGCAGCTGGAA
GTCGGAGTGGGCGCCCTCGCCGGGTCGACCATCATGCTGCTGACCATTCC
ATGGTTCCTCAGCGTCTACGCCGGCCGAGTCTCCATTGACCGCACGACGG
GCGTTTGCACCTACAAACGGCCCGCCAACAGCCCAGACTGGGCCAAGCTG
ACGCCATCGGGCGATGCCTCCCTGTACTACACGGGCGTGACGGGATCGCC
GCAGCTCAAGATCGGCGGCGGCCTCATGATCCTGACGGCGCTGTCGTACC
TGATCATTCAGGGCCCCGCGTTTCTGTACTCGGGGGACGACGACACGGAG
GTGTCGGCGGGGGAGCACAACTTTGCGCTGGCGGGCATGATCACATGCTT
GGCGTTCTTCATGGGGTACCTCTACTACCAGTGGTGGCTCGCCTCGCACG
ACCAGGACCAGGCGAGTGTCCTGGAGGATTACATGGAGGAAGTGTGGCGC
GACCGCATCATGCGCGGCCAGATCTCGCTGCTC