mRNA_P-wetherbeei_contig54155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A127ER86_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ER86_9HYPH) HSP 1 Score: 213 bits (543), Expect = 2.270e-68 Identity = 98/143 (68.53%), Postives = 115/143 (80.42%), Query Frame = 1
Query: 4 TTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLA 432
T+D D ++LVD +DV IGTA KL AHQRGL+HRAIS LVRN++GEFLLQRR KYHSGGLWTNACCSHPLP E+ +DAA+RRL QEMG C L P+F+ HY V GGLIENE+VHV+GG HDG + PDPAEVSE +W+ A
Sbjct: 8 TSDTDPIILVDADDVQIGTAGKLDAHQRGLRHRAISVLVRNASGEFLLQRRNPAKYHSGGLWTNACCSHPLPDEATSDAARRRLSQEMGFTCALEPLFVYHYNDPVPGGLIENEIVHVYGGRHDGAIRPDPAEVSEFKWVRYA 150
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: J6UJB3_9RHOB (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J6UJB3_9RHOB) HSP 1 Score: 191 bits (485), Expect = 1.600e-59 Identity = 90/139 (64.75%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 22 VVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
++LVD +D IG A K H+RGL HRAIS LVRNSAGE L+QRR +KYHSGGLW N CCSHP PGES DAA RRL +EMG +CTLSP+FI YRA +S G IE+ELVH FGGT DG V+PDP EVSE W+ L
Sbjct: 15 IILVDASDKPIGVAGKTEVHRRGLPHRAISVLVRNSAGELLIQRRNPQKYHSGGLWANTCCSHPRPGESTLDAALRRLPEEMGFSCTLSPLFITRYRAKLSNGFIEDELVHAFGGTFDGEVSPDPEEVSEHAWVAFDTL 153
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A1G6ECW8_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6ECW8_9HYPH) HSP 1 Score: 186 bits (472), Expect = 1.210e-57 Identity = 87/146 (59.59%), Postives = 109/146 (74.66%), Query Frame = 1
Query: 1 MTTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
++TD+D V+LV+ +D +GT +KL AHQ G+ HRA+S +V S G LLQ+RA KYHSGGLWTN CCSHP PGE+ AAQRRL +EMG AC L+P+F VHYRA+VS LIENELVHVFGG +G P+PAEV + RW + A+
Sbjct: 2 VSTDNDRVILVERDDREVGTLDKLAAHQSGVLHRALSVIVARSDGSLLLQKRAAAKYHSGGLWTNTCCSHPRPGEAVDVAAQRRLEEEMGFACPLTPLFTVHYRANVSNDLIENELVHVFGGRFEGEPNPNPAEVEDWRWASPEAI 147
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A327L7C7_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327L7C7_9HYPH) HSP 1 Score: 181 bits (460), Expect = 1.010e-55 Identity = 86/139 (61.87%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 22 VVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
++LVD +D G A K H+RGL HRAIS LVRN+ GE L+QRR KYHSGGLW N CCSHP PGES DAA RRL +EMG CTL+P+F HYRA +S G IE+ELVH FGGT +GPVAP P EVSE W+ L
Sbjct: 15 IILVDADDRPTGVAGKTEVHRRGLPHRAISVLVRNARGEMLIQRRNPAKYHSGGLWANTCCSHPRPGESTLDAALRRLPEEMGFVCTLAPLFKTHYRATLSNGFIEDELVHAFGGTWEGPVAPAPDEVSEYAWVPSETL 153
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A0H5BF16_BLAVI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Blastochloris viridis TaxID=1079 RepID=A0A0H5BF16_BLAVI) HSP 1 Score: 181 bits (458), Expect = 1.900e-55 Identity = 87/139 (62.59%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 22 VVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
VVL+D D+ IGTAEKL AH++GLKH AIS +VR+ AG +LLQRRA KYHSGGLWTN CCSHP PGE+ AA RRL++EMGIAC L F+ YRA V LIE+E+VHVF GT+DG ++PDP EV RW+ +A L
Sbjct: 19 VVLLDGADLPIGTAEKLDAHRQGLKHLAISVIVRDGAGRWLLQRRAAGKYHSGGLWTNTCCSHPRPGEAVPAAAARRLVEEMGIACPLELAFVTTYRAAVEPDLIEHEVVHVFLGTYDGAISPDPDEVDAWRWVAVAEL 157
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A2H6AZ12_9BACT (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AZ12_9BACT) HSP 1 Score: 180 bits (456), Expect = 5.240e-55 Identity = 81/141 (57.45%), Postives = 103/141 (73.05%), Query Frame = 1
Query: 1 MTTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWM 423
M + V+LVDD+D A+GTA KL AH+ GL+HRA+S ++R+ G LLQ+RA+ KYHSGGLWTN CCSHP P E AAQRRL++EMG +C L P+ V YRADV GG+IE+E+VHVF G +DGP+ PDP E W+
Sbjct: 1 MIDSEEFVLLVDDDDQAVGTAGKLEAHRHGLRHRALSVVIRDPRGRLLLQKRAIGKYHSGGLWTNTCCSHPRPQEPVERAAQRRLLEEMGFSCELLPLLRVPYRADVGGGMIEDEIVHVFAGVYDGPLRPDPREAEGYAWV 141
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A327KH60_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KH60_9HYPH) HSP 1 Score: 179 bits (454), Expect = 6.800e-55 Identity = 86/139 (61.87%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 22 VVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
++LVD +D G A K H+RGL HRAIS LVRN GE L+QRR KYHSGGLW N CCSHP PGES DAA RRL +EMG AC L+P+F HYRA +S G IE+ELVH FGGT DG VAP P EVSE W+ L
Sbjct: 9 IILVDADDRPTGVAGKTEVHRRGLPHRAISVLVRNPRGEILIQRRNPAKYHSGGLWANTCCSHPRPGESTLDAALRRLPEEMGFACALAPIFKTHYRATLSNGFIEDELVHAFGGTFDGVVAPAPDEVSEYAWVPFETL 147
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A327K3U9_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K3U9_9HYPH) HSP 1 Score: 178 bits (452), Expect = 1.650e-54 Identity = 84/139 (60.43%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 22 VVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
++LVD +D +GTA K H+RGL HRAIS LVRN G+ L+QRR KYHSGGLW N CCSHP PGE+ AAQRRL +EMG C L P+F HYRA + G IE+ELVHVFGG DGPVAP P EVSE W+ L
Sbjct: 15 IILVDADDRPVGTAGKTEVHRRGLPHRAISVLVRNRQGDILVQRRNPAKYHSGGLWANTCCSHPRPGETTLAAAQRRLPEEMGFTCPLQPLFTTHYRATLENGFIEDELVHVFGGIWDGPVAPAPDEVSEFAWVPFDRL 153
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A348G212_9HYPH (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Blastochloris TaxID=59282 RepID=A0A348G212_9HYPH) HSP 1 Score: 177 bits (448), Expect = 6.280e-54 Identity = 86/145 (59.31%), Postives = 106/145 (73.10%), Query Frame = 1
Query: 4 TTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
T +H VVL+D D GTAEKL AH++GLKH AIS +VR+ G +LLQ+RA KYHSGGLWTN CCSHP PGE+ AA RRL++EMGIAC L P F+ YRA V LIE+E+VHVF GT+DG ++PDP EV RW+++ L
Sbjct: 15 TLEH--VVLLDAADQPAGTAEKLDAHRKGLKHLAISVIVRDRDGRWLLQQRAAGKYHSGGLWTNTCCSHPRPGETVPAAASRRLVEEMGIACALEPAFVTTYRAAVDPDLIEHEVVHVFIGTYDGAISPDPDEVESWRWVSVEDL 157
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Match: A0A212S0S5_RHOAC (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=A0A212S0S5_RHOAC) HSP 1 Score: 176 bits (446), Expect = 1.050e-53 Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 1 MTTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQRRALEKYHSGGLWTNACCSHPLPGESPADAAQRRLMQEMGIACTLSPMFIVHYRADVSGGLIENELVHVFGGTHDGPVAPDPAEVSETRWMTLAAL 438
M D + V+LVDD D +G K+ AH+ GL+HRAIS V N GE LLQRRAL KYHSGGLWTN CC+HP GE ADAA RRL +E+G+AC L + + HYRADV GG +E+E+VH+F DG PDPAEV + W++ A L
Sbjct: 1 MIDDLETVILVDDEDRQVGALGKIEAHRLGLRHRAISVCVTNERGEMLLQRRALSKYHSGGLWTNTCCTHPRVGEDVADAAARRLNEELGVACDLRFLRVTHYRADVGGGFVEDEVVHIFHARFDGEPRPDPAEVMDYAWLSRAEL 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54155.1.1 >prot_P-wetherbeei_contig54155.1.1 ID=prot_P-wetherbeei_contig54155.1.1|Name=mRNA_P-wetherbeei_contig54155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp MTTDHDLVVLVDDNDVAIGTAEKLGAHQRGLKHRAISALVRNSAGEFLLQback to top mRNA from alignment at P-wetherbeei_contig54155:93..530+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54155.1.1 ID=mRNA_P-wetherbeei_contig54155.1.1|Name=mRNA_P-wetherbeei_contig54155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig54155:93..530+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54155:93..530+ >mRNA_P-wetherbeei_contig54155.1.1 ID=mRNA_P-wetherbeei_contig54155.1.1|Name=mRNA_P-wetherbeei_contig54155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig54155:93..530+ (Phaeothamnion wetherbeei SAG_119_79)back to top |