mRNA_P-wetherbeei_contig5414.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: D7FKX3_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX3_ECTSI) HSP 1 Score: 116 bits (290), Expect = 7.580e-27 Identity = 78/210 (37.14%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 1 GDNACSLLLKQAASLLETASWKLCREVAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAA-NAMYELDMVTVMAGDKCRDMANSLIDAIRAKENGVSATTTTKDGSGSVHLSRSPPSP-SSRARK-----RPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHGSGN 609
G CSLL+++A LE W C EVA +ARE AWE+LH G SW+ VA VHR AYG++G + A+A +G + NA+Y LD+V +MAG + + +AN+ ++A+ A S T G+ S +P ++RA RP+ + + S + R+ P L F RDYMQ PVI++G ++ WPA+G S N
Sbjct: 47 GSRPCSLLVQRAIQHLEEGRWTRCHEVALKAREYAWEQLHSGKSWQTVAKVHRDAYGVSGTLVAIATYISGEADSLDNAVYALDLVAMMAGGRFQGVANTFVEAMEADS--FSKTDLAPPRVGAAQSPSSGVAPVATRAASVPDGVRPKKAKRDRSMATGRPGSGGGIRRIIMPPLDVFRRDYMQAETPVILSGVLDGWPAMGASRSWSN 254
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A2P4YSA3_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YSA3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.300e-10 Identity = 63/209 (30.14%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 1 GDNACSLLLKQAASLLETASWKLCRE-------VAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAIRAK--ENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHG 600
G+ LL ++ A++ + C + +A A E +WE+LH G SW++V PV RQA+G+A ++ A ++ +A + LDM +MAG ++LI + E+ + T + G H+ SP+ R R R+ P+L F RD M Q PVIITGAM WPALG + G
Sbjct: 2 GETEMELLFQRGAAIADLLLRATCSKDATLVETLAEAAYERSWEKLHCG-SWKDVLPVWRQAFGIASVLQARCLLR--RQKSAECLKMLDMCLMMAGPLAPPETHALIANVEKLLVEDAQETSKLTLEAEGVEHIGGEVKSPTLTFRVR----------------------RLEAPTLEEFRRDVMMQNEPVIITGAMEFWPALGRAAG 185
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A2P4XDY2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDY2_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.830e-9 Identity = 58/178 (32.58%), Postives = 81/178 (45.51%), Query Frame = 1
Query: 67 LCREVAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAIRAKENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHG 600
L +A A E +WE+LH G SW++V PV RQA+G+A ++ A ++ +A + LDM +MAG ++LI + E + G H+ SP+ R R R+ P+L F RD M Q PVIITGAM WPALG + G
Sbjct: 30 LVETLAEAAYERSWEKLHCG-SWKDVLPVWRQAFGIASVLQARCLLR--RQKSAECLKMLDMCLMMAGPLAPPETHALIANV---EKLLVEDAQETSAEGVEHIGGEVKSPTLMFRVR----------------------RLEAPTLEEFHRDVMMQNEPVIITGAMEFWPALGRAAG 179
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A8K1CBG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBG5_PYTOL) HSP 1 Score: 65.5 bits (158), Expect = 5.070e-9 Identity = 58/175 (33.14%), Postives = 80/175 (45.71%), Query Frame = 1
Query: 82 AAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAIRAKENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDE------DLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALG 588
A A E+AWE LH G SW+E+ V RQA+G A ++ A A AG ++ LDM +MAG + LI + V + + S H + KRPR + PD+ V + + R+ PSL Y++ PVIITGAM NWPA+G
Sbjct: 46 ALRAYELAWERLHCG-SWKEIHAVWRQAFGYAAVLNAHA--LAGREEHTESLKTLDMCLMMAGPHAPSNVHKLIAIAEEQLRNVD------ESAESEHTA-----------KRPRLAG----PDQLGLVQENFPVLKFSIERIEMPSLADLEHKYIRTNTPVIITGAMENWPAMG 196
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A329SC79_9STRA (JmjC domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SC79_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 5.860e-8 Identity = 63/210 (30.00%), Postives = 95/210 (45.24%), Query Frame = 1
Query: 1 GDNACSLLLKQAASLLETASWKLCREVAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAIR------AKENGVSATTTTK----DGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHG 600
G A + LL++AA+ + KL +A A E WE+LH G SW++V PV RQA+GLA ++ A ++ P + LDM +MAG ++LI ++ A+++ S K + G +HL P + + R+ P+L F + M Q PV+ITGAM WPALG + G
Sbjct: 23 GGAAIADLLQRAANSEDE---KLVETLAVAAYERCWEKLHCG-SWKDVLPVWRQAFGLASVLRARCLLRCKQSP--ECLKMLDMCLMMAGPLAPSETHALIASVERQLAEDAQQDEPSEPRHFKRPRLEAEGLLHLGGEVKEP----------------------MLTFPVRRLEMPTLEEFRHNVMLQNEPVVITGAMEFWPALGRAAG 204
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A6A3UEU5_9STRA (JmjC domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UEU5_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 4.800e-7 Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 1
Query: 79 VAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAI--RAKENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDK-DAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHG 600
+AA A +WE+LH G SW+ V PV RQA+GLA ++ A ++ +A + LDM +MAG ++LI + + ++ + A R K+PR + DK +A + R+ P+L F R+ M + PV+ITGAM WPALG + G
Sbjct: 42 LAAAAYARSWEKLHCG-SWKSVLPVWRQAFGLASVLQASCLLRRHQ--SAECLEMLDMCLMMAGPLAPPQTHALIARVEQQLEDEEIEA----------------------RHFKKPRLAEVERVGDKVEAPELTFPVRRLEMPTLEQFRREVMLRNEPVVITGAMEFWPALGRAAG 193
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A067CGP0_SAPPC (JmjC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGP0_SAPPC) HSP 1 Score: 58.5 bits (140), Expect = 1.160e-6 Identity = 63/193 (32.64%), Postives = 83/193 (43.01%), Query Frame = 1
Query: 22 LLKQAASLLETASWKLCREVAAEAREMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRD---MANSLIDAIRAKENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGL 591
LL QAA + + R VA EA W+ LH G W EV V RQ + A + LA VQA + A A+ LD +MAG D M SLI+ + E V + S P P+ A + + P PS+T F YM+ RPV+I GAM++WPA+GL
Sbjct: 5 LLAQAAERVAAQDYAAARGVAEEAVHRIWDRLHLG-KWSEVDVVWRQRFARACHL--LAQVQAATSDAPTAIRTLDTGLLMAGPYGHDLHAMMESLIETLPRDETLVEQDAPKRQCVRSREHVALYPLPA------------------QATIIECISP----PSMTVFRERYMRPHRPVVIRGAMDHWPAMGL 172
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A6A4ZZK4_9STRA (JmjC domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZK4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 6.300e-6 Identity = 26/40 (65.00%), Postives = 28/40 (70.00%), Query Frame = 1
Query: 481 LPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGLSHG 600
L RV PS+ AFL YM PVIITGAMN WPALG +HG
Sbjct: 54 LARVDAPSMHAFLTSYMHSNEPVIITGAMNQWPALGKTHG 93
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: A0A6B2L7B5_9EUKA (JmjC domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L7B5_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 6.960e-6 Identity = 51/164 (31.10%), Postives = 79/164 (48.17%), Query Frame = 1
Query: 97 EMAWEELHGGPSWREVAPVHRQAYGLAGIMGALAGVQAGSLPAANAMYELDMVTVMAGDKCRDMANSLIDAIRAKENGVSATTTTKDGSGSVHLSRSPPSPSSRARKRPRSSWKSERPDKDAAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALG 588
++AW +LH G W++ R + L+ + G + +A+ +LD+ +M G R+ + + + N + S + + PS RKR RS E P + ++ ++PRV PSLT FLR+YM +PVIITG M NWPALG
Sbjct: 19 DLAWGQLHVG-YWKDTPTAWRDVFSLSCLYLGYLSEAKGDIQ--HALEKLDLGILMGGPTFRNNLHCYVKYLHHPHNRPNLPAP----SPKTEIQQQTRQPS---RKRKRSDINFE-PLLNPSL---EIPRVKVPSLTCFLRNYMSCKKPVIITGLMANWPALG 168
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Match: UPI0018D70DCE (lysine-specific demethylase 8-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D70DCE) HSP 1 Score: 55.1 bits (131), Expect = 1.670e-5 Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 460 AAVSDEDLPRVHCPSLTAFLRDYMQQARPVIITGAMNNWPALGL 591
A ++PRV CPSL +F YMQ PVII GAM +WPALGL
Sbjct: 173 AISKQHEIPRVFCPSLLSFQSQYMQTKTPVIIQGAMEHWPALGL 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5414.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5414.2.1 >prot_P-wetherbeei_contig5414.2.1 ID=prot_P-wetherbeei_contig5414.2.1|Name=mRNA_P-wetherbeei_contig5414.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=204bp GDNACSLLLKQAASLLETASWKLCREVAAEAREMAWEELHGGPSWREVAPback to top mRNA from alignment at P-wetherbeei_contig5414:817..1429- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5414.2.1 ID=mRNA_P-wetherbeei_contig5414.2.1|Name=mRNA_P-wetherbeei_contig5414.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=613bp|location=Sequence derived from alignment at P-wetherbeei_contig5414:817..1429- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5414:817..1429- >mRNA_P-wetherbeei_contig5414.2.1 ID=mRNA_P-wetherbeei_contig5414.2.1|Name=mRNA_P-wetherbeei_contig5414.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=612bp|location=Sequence derived from alignment at P-wetherbeei_contig5414:817..1429- (Phaeothamnion wetherbeei SAG_119_79)back to top |