mRNA_P-wetherbeei_contig54095.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54095.1.1
Unique NamemRNA_P-wetherbeei_contig54095.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A7C4TR93_9HYPH (Alpha/beta hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TR93_9HYPH)

HSP 1 Score: 263 bits (671), Expect = 5.390e-81
Identity = 115/177 (64.97%), Postives = 146/177 (82.49%), Query Frame = 1
Query:    1 PWDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            PWDVVPVY+GTDR ++    R  YGS RA++++LGRALVTVPK H++P VERPWVY LPFT IV++ E+EDPN HFTLKE++ ++  E   ++++RL AS+ +KDHA++FVHGFNT+F+ A+FRTAQIAYDLKFDGAPFLYSWPS GQ+G QDYSYDRES GQAEPY R  ++ V +
Sbjct:  370 PWDVVPVYYGTDRVAEPHATRASYGSGRAKRLELGRALVTVPKSHQVPQVERPWVYHLPFTSIVLFREREDPNKHFTLKEVRAVTESEFLEMVRERLRASQSYKDHAIVFVHGFNTSFDNALFRTAQIAYDLKFDGAPFLYSWPSSGQLGLQDYSYDRESTGQAEPYFRRFLELVTR 546          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A2W4QQV4_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QQV4_9PROT)

HSP 1 Score: 254 bits (649), Expect = 1.390e-80
Identity = 113/175 (64.57%), Postives = 142/175 (81.14%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVV 528
            WDVVPV++GTDR      ER +YGSDR +++ LG ALVTVPK+H++P +ERPWVYR+PFT+IVI++E EDP  HFT+KE++ +  +E   L++ RL  S  +K+HAL+FVHGFNT+F+ AIFRTAQIAYDLKFDGAPFLYSWPSKGQ+G QDYSYDRESA  AEPY R+ +  VV
Sbjct:   92 WDVVPVFYGTDRARTENAERIDYGSDRGKRLQLGHALVTVPKIHQVPQIERPWVYRIPFTQIVIWQEAEDPRKHFTIKEIRELGEQEFLELVRKRLAESMAYKNHALVFVHGFNTSFQFAIFRTAQIAYDLKFDGAPFLYSWPSKGQLGMQDYSYDRESAQAAEPYFRDFLKLVV 266          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A2W4L0N1_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L0N1_9PROT)

HSP 1 Score: 251 bits (640), Expect = 4.130e-79
Identity = 110/176 (62.50%), Postives = 141/176 (80.11%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            WDVVPV++GTDR  D   +  +Y S R +++ LG  LVTVPK H++P +ERPWVY LPFTRIVI++E EDP  HFT+KE++ + REE   L++ RL  S+ +++HA++FVHGFNT+F+ A+FRTAQIAYDLKFDGAPFLYSWPSKGQ+G  DYSYDRESAG AEPY RE ++ VV+
Sbjct:  102 WDVVPVFYGTDRARDPAAKAIDYSSGRGKRLQLGHVLVTVPKSHQVPQIERPWVYHLPFTRIVIWQESEDPKKHFTIKEIRELGREEFLELVRKRLSESKAYENHAIVFVHGFNTSFQFAVFRTAQIAYDLKFDGAPFLYSWPSKGQLGLSDYSYDRESAGAAEPYFREFLELVVR 277          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A3N5NZF5_9HYPH (Alpha/beta hydrolase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5NZF5_9HYPH)

HSP 1 Score: 240 bits (613), Expect = 2.810e-76
Identity = 107/177 (60.45%), Postives = 140/177 (79.10%), Query Frame = 1
Query:    1 PWDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            PWDVVPV++GTDR          YG +RAR+++LGRALVTVPK H++P +ERPW YRLPFT+IV++ + EDP  HFTLK+++ ++++E   LI +RL  S ++KDHAL+FVHGFNT+FE A++RTAQIAYD+KFDG   LYSWPSKG +   DYS+DRESAGQAEPYLRE ++ V +
Sbjct:    3 PWDVVPVFYGTDRVRQPAGASAIYGPERARRLELGRALVTVPKAHQLPLIERPWTYRLPFTQIVLHSQPEDPRQHFTLKDVRPLTKDEFLQLIAERLNGSSNYKDHALIFVHGFNTSFEYALYRTAQIAYDIKFDGVALLYSWPSKGALTVHDYSHDRESAGQAEPYLREFLELVAR 179          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A537S0Z5_9PROT (Alpha/beta hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S0Z5_9PROT)

HSP 1 Score: 234 bits (597), Expect = 4.070e-73
Identity = 106/176 (60.23%), Postives = 141/176 (80.11%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            WDVVPV++GTDRK   + +R  +G+DR R++++GRALVTVPK H++PNVERPW  ++P+T IVIY++ EDP  HFT++E+K +S+EEL  LI++RL ASR F+D AL+F+HG+N  F+ A+FRTAQIAYDLK+DGAPFLYSWPS    G   Y YDRESA QAEPYL++ +  V+K
Sbjct:   73 WDVVPVFYGTDRKRQDQAKRIGFGTDRGRRLEVGRALVTVPKAHQVPNVERPWAIKVPYTSIVIYQQDEDPKRHFTIQEIKALSKEELLALIRERLRASRSFQDQALVFIHGYNNGFDYALFRTAQIAYDLKYDGAPFLYSWPSGA--GIAGYPYDRESAQQAEPYLQQFLLMVLK 246          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: UPI001995FCF0 (Alpha/beta hydrolase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI001995FCF0)

HSP 1 Score: 233 bits (593), Expect = 1.020e-72
Identity = 107/176 (60.80%), Postives = 137/176 (77.84%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            W VVPVY+GTDR      +R  +GSDRARK+ +G AL+TVPKVHE+PNVERPWV ++P+  + IY EKEDP  HFT+KE+K +++EEL   +K RLG ++ FKD A++FVHG+NT+F+ A++RTAQIAYDL FDGA FLYSWPS G +    Y+YDRESA  +EPYLRE +D VVK
Sbjct:   47 WQVVPVYWGTDRAVQPNAQRLAFGSDRARKLQVGEALITVPKVHEVPNVERPWVVKIPYFDVTIYAEKEDPKSHFTVKEIKALTKEELLAQVKTRLGEAKLFKDQAVVFVHGYNTSFDNALYRTAQIAYDLDFDGATFLYSWPSGGAVA--SYTYDRESAQASEPYLREFLDMVVK 220          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: V5SGP1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SGP1_9HYPH)

HSP 1 Score: 230 bits (587), Expect = 2.750e-71
Identity = 106/175 (60.57%), Postives = 137/175 (78.29%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVV 528
            WDVVPVY+GTDR      +R +YG+DR R+++LGRALVTVPK H  P +ERPW  R+    I +YEE EDPN HFT++E+KT+S E+   ++++RL AS+ +KDHA +FVHG+NT+F+ AI+RTAQIAYDLKFDGAPF YSWPS G  G   Y+YDRES+GQAEPYLRE ++ V+
Sbjct:   93 WDVVPVYYGTDRAERSTKDRLDYGTDRGRRLELGRALVTVPKAHREPLIERPWAIRV--FNITLYEEAEDPNRHFTMQEVKTLSEEDFLTVVRERLAASKRYKDHAFIFVHGYNTSFDYAIYRTAQIAYDLKFDGAPFAYSWPSGG--GIASYTYDRESSGQAEPYLREFMEMVI 263          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A7C2QZV2_9HYPH (Alpha/beta hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QZV2_9HYPH)

HSP 1 Score: 228 bits (582), Expect = 3.030e-71
Identity = 103/176 (58.52%), Postives = 138/176 (78.41%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            WDVVPV++GTDR    + +RP Y S+RARK++LGRALVTVPK H++PN+ERP+  R+P+  + IYE+ EDP  HFT++ELK +SRE+   L+++R+  S  FKD A++FVHG+NT F+ A+FR+AQ+AYDL+FDGA FLYSWPS G  G   Y+YDRES+ QAEPYLR  ++ VVK
Sbjct:   32 WDVVPVFYGTDRVRKDEPKRPIYTSERARKLELGRALVTVPKSHQVPNIERPFAIRIPYINVTIYEQAEDPKQHFTIQELKVLSREDFLALVRERVAGSSAFKDQAMVFVHGYNTAFDFALFRSAQMAYDLQFDGASFLYSWPSGG--GLTSYNYDRESSEQAEPYLRSFIELVVK 205          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A6I0EG12_HYPSQ (Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EG12_HYPSQ)

HSP 1 Score: 228 bits (580), Expect = 3.140e-71
Identity = 107/174 (61.49%), Postives = 134/174 (77.01%), Query Frame = 1
Query:   10 VVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            VVPVY+GTDR      +R  +GSDRARK+ LG A+VTVPKVHE+P VERPWV  +P+  + IY EKEDP  HFT+KE+K ++REEL   +K RL  S+ +KD AL+FVHG+NT+F+ A++RTAQIAYDL FDGAPFLYSWPS G +    Y+YDRESA  +EPYLRE ++ VVK
Sbjct:    2 VVPVYWGTDRAVQPNAQRLAFGSDRARKLQLGEAMVTVPKVHEVPKVERPWVVTIPYFDVTIYAEKEDPKKHFTVKEIKALTREELLAQVKARLKGSKTYKDQALVFVHGYNTSFDNALYRTAQIAYDLDFDGAPFLYSWPSGGAVA--SYTYDRESAQASEPYLREFLEMVVK 173          
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Match: A0A6I0EMD7_HYPSQ (Alpha/beta hydrolase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EMD7_HYPSQ)

HSP 1 Score: 229 bits (585), Expect = 3.230e-71
Identity = 102/176 (57.95%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    4 WDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNVERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGASRDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIGFQDYSYDRESAGQAEPYLREMVDFVVK 531
            WDVVPV+FGTDR+     +R  + S+R R++ LGRA+VTVPK HE+PN+ERPWV ++P+  + IYEE EDP  HFT++E+K + ++E   L + R+ AS+ +KDHAL+FVHG+NT F+ A++RTAQIAYDLKFDGA FLYSWPS G +    Y+YDRESA  +EPYLR+ +D VVK
Sbjct:   74 WDVVPVFFGTDREEQPDAKRLHFNSERGRRLQLGRAMVTVPKAHEVPNIERPWVVKIPYFDVTIYEEAEDPAKHFTMQEIKRLPQDEFLTLARQRIAASKSYKDHALVFVHGYNTAFDHAVYRTAQIAYDLKFDGAAFLYSWPSGGAVA--SYTYDRESATASEPYLRQFLDLVVK 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54095.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TR93_9HYPH5.390e-8164.97Alpha/beta hydrolase n=1 Tax=Hyphomicrobiales bact... [more]
A0A2W4QQV4_9PROT1.390e-8064.57Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A2W4L0N1_9PROT4.130e-7962.50Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A3N5NZF5_9HYPH2.810e-7660.45Alpha/beta hydrolase n=1 Tax=Hyphomicrobiaceae bac... [more]
A0A537S0Z5_9PROT4.070e-7360.23Alpha/beta hydrolase n=1 Tax=Alphaproteobacteria b... [more]
UPI001995FCF01.020e-7260.80Alpha/beta hydrolase n=1 Tax=Hyphomicrobium sp. Ta... [more]
V5SGP1_9HYPH2.750e-7160.57Uncharacterized protein n=1 Tax=Hyphomicrobium nit... [more]
A0A7C2QZV2_9HYPH3.030e-7158.52Alpha/beta hydrolase n=1 Tax=Hyphomicrobiales bact... [more]
A0A6I0EG12_HYPSQ3.140e-7161.49Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicro... [more]
A0A6I0EMD7_HYPSQ3.230e-7157.95Alpha/beta hydrolase n=1 Tax=Hyphomicrobium sp. Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54095contigP-wetherbeei_contig54095:1..531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1267005.KB911256_gene1522
PFAMsDUF900,Sel1
Model size531
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07126
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.13e-70
EggNOG OGsCOG4782@1|root,COG4782@2|Bacteria,1MVAD@1224|Proteobacteria,2TTCR@28211|Alphaproteobacteria
DescriptionProtein conserved in bacteria
Cds size531
COG categoryC
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186808.500971-CDS-P-wetherbeei_contig54095:0..5311683186808.500971-CDS-P-wetherbeei_contig54095:0..531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54095 1..531 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54095.1.1prot_P-wetherbeei_contig54095.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54095 1..531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54095.1.1

>prot_P-wetherbeei_contig54095.1.1 ID=prot_P-wetherbeei_contig54095.1.1|Name=mRNA_P-wetherbeei_contig54095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
PWDVVPVYFGTDRKSDGKIERPEYGSDRARKMDLGRALVTVPKVHEIPNV
ERPWVYRLPFTRIVIYEEKEDPNLHFTLKELKTMSREELAGLIKDRLGAS
RDFKDHALLFVHGFNTTFEAAIFRTAQIAYDLKFDGAPFLYSWPSKGQIG
FQDYSYDRESAGQAEPYLREMVDFVVK
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mRNA from alignment at P-wetherbeei_contig54095:1..531+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54095.1.1 ID=mRNA_P-wetherbeei_contig54095.1.1|Name=mRNA_P-wetherbeei_contig54095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54095:1..531+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTGGGATGTCGTACCAGTGTATTTCGGCACGGACCGCAAGTCGGATGG AAAAATCGAACGACCCGAGTACGGCAGCGATCGCGCGCGCAAGATGGATC TGGGTCGGGCACTCGTGACGGTGCCGAAGGTGCACGAAATTCCCAACGTC GAGCGGCCATGGGTCTACCGGCTGCCGTTCACGAGGATCGTGATCTACGA GGAGAAGGAAGACCCGAACCTGCACTTCACGCTCAAAGAGCTGAAGACTA TGAGCCGGGAGGAACTCGCAGGGCTCATCAAGGACCGGCTCGGGGCGTCG CGGGACTTCAAAGATCATGCGCTATTGTTCGTGCATGGGTTCAACACGAC ATTCGAAGCCGCGATTTTCCGCACCGCGCAGATTGCGTACGACCTCAAGT TCGACGGGGCGCCCTTCCTTTACAGCTGGCCGTCGAAAGGGCAGATCGGG TTCCAGGACTACAGCTACGATCGCGAGAGTGCCGGTCAGGCAGAGCCATA CTTGCGCGAAATGGTTGATTTCGTCGTCAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54095:1..531+

>mRNA_P-wetherbeei_contig54095.1.1 ID=mRNA_P-wetherbeei_contig54095.1.1|Name=mRNA_P-wetherbeei_contig54095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54095:1..531+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTGGGATGTCGTACCAGTGTATTTCGGCACGGACCGCAAGTCGGATGG
AAAAATCGAACGACCCGAGTACGGCAGCGATCGCGCGCGCAAGATGGATC
TGGGTCGGGCACTCGTGACGGTGCCGAAGGTGCACGAAATTCCCAACGTC
GAGCGGCCATGGGTCTACCGGCTGCCGTTCACGAGGATCGTGATCTACGA
GGAGAAGGAAGACCCGAACCTGCACTTCACGCTCAAAGAGCTGAAGACTA
TGAGCCGGGAGGAACTCGCAGGGCTCATCAAGGACCGGCTCGGGGCGTCG
CGGGACTTCAAAGATCATGCGCTATTGTTCGTGCATGGGTTCAACACGAC
ATTCGAAGCCGCGATTTTCCGCACCGCGCAGATTGCGTACGACCTCAAGT
TCGACGGGGCGCCCTTCCTTTACAGCTGGCCGTCGAAAGGGCAGATCGGG
TTCCAGGACTACAGCTACGATCGCGAGAGTGCCGGTCAGGCAGAGCCATA
CTTGCGCGAAATGGTTGATTTCGTCGTCAAG
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