mRNA_P-wetherbeei_contig54083.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A6N6T3A8_9HYPH ((S)-2-haloacid dehalogenase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3A8_9HYPH) HSP 1 Score: 271 bits (692), Expect = 6.960e-90 Identity = 130/177 (73.45%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGDKA +T +WRDKQLQYTWLRGLQGRHADFWQVT DALDF++E+L I + +R RL++LYRTL CFPEVP+VL LK+ GF TAILSNG+P MLADAV GA LG V+D V+SVE+VGVFKPHP VY AV L V + IAFQSSNAWDA+AASAFGMR VWCNRY QRRERLPG
Sbjct: 33 LGDKATAVTTLWRDKQLQYTWLRGLQGRHADFWQVTGDALDFTLETLRISNSTVRDRLMNLYRTLDCFPEVPEVLARLKKDGFATAILSNGSPAMLADAVAGAKLGSVIDQVVSVEEVGVFKPHPRVYQRAVDRLGVPASAIAFQSSNAWDAYAASAFGMRTVWCNRYNQRRERLPG 209
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A2N9LLX8_9BURK ((S)-2-haloacid dehalogenase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A2N9LLX8_9BURK) HSP 1 Score: 256 bits (655), Expect = 2.950e-84 Identity = 121/177 (68.36%), Postives = 139/177 (78.53%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGDKAA+L +WRDKQLQYTWLR +QGRHADFWQVT DALDF+M+ + I G LR RL+ LYR L FPEVP VL++LKQ G AILSNG+P ML +AV+ AG+G LD +LSVE+VG FKPHP VY A L + +I FQSSNAWDA+AASAFGMRVVWCNRYGQR ERLPG
Sbjct: 33 LGDKAASLARLWRDKQLQYTWLRTIQGRHADFWQVTGDALDFAMDEMQISGPGLRGRLMGLYRRLDAFPEVPDVLRELKQTGLAVAILSNGSPSMLTEAVESAGIGRYLDAILSVEEVGAFKPHPKVYQCAADRLQIPAGQICFQSSNAWDAYAASAFGMRVVWCNRYGQRPERLPG 209
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: UPI0016690BEC (haloacid dehalogenase type II n=1 Tax=Alsobacter metallidurans TaxID=340221 RepID=UPI0016690BEC) HSP 1 Score: 256 bits (655), Expect = 2.950e-84 Identity = 125/177 (70.62%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGD+A LTA+WRDKQLQY WLR LQGR+ADFWQVT DALDFS+++LG+ LR RL+ LY TL+ FPEV +L LK+ GF TAILSNG+P ML AV+GAG+G LDHVLSV +VGV+KPHP VY LAV L VAP IAFQSSN WDA+ ASAFGMRVVWCNRYGQR ERLPG
Sbjct: 31 LGDRAGPLTALWRDKQLQYAWLRSLQGRYADFWQVTGDALDFSLDALGLVQPGLRDRLMGLYATLRPFPEVAAMLSTLKKRGFATAILSNGSPDMLRSAVEGAGVGPWLDHVLSVAEVGVYKPHPSVYQLAVDRLGVAPDAIAFQSSNGWDAYGASAFGMRVVWCNRYGQRPERLPG 207
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: UPI0018DF18C6 (haloacid dehalogenase type II n=4 Tax=Acetobacteraceae TaxID=433 RepID=UPI0018DF18C6) HSP 1 Score: 256 bits (654), Expect = 4.480e-84 Identity = 127/178 (71.35%), Postives = 143/178 (80.34%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEG-AALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGDKA LT +WRDKQLQY+WLRGLQGR+ FWQVT DALDF++E+L + LR RL+DLYRTL FPEVP VL+ L++AGF TAILSNG+P MLA AV+GAGLGG D V+SV++VG FKP P VY AV L V IAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG
Sbjct: 30 LGDKAGPLTTLWRDKQLQYSWLRGLQGRYVPFWQVTGDALDFALETLDLPADGPLRERLMDLYRTLGTFPEVPGVLRALREAGFATAILSNGSPDMLASAVEGAGLGGAFDAVISVDEVGNFKPDPRVYQRAVDRLGVPAEAIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 207
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A1F4EXE7_9PROT ((S)-2-haloacid dehalogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EXE7_9PROT) HSP 1 Score: 253 bits (645), Expect = 9.790e-83 Identity = 123/177 (69.49%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGDK LTA+WR+KQLQYTWLR LQ RHADFWQVT DALDF+ME+LGI ALR RL+ LY +L FPEVP +L+ LK AG TAILSNG+P ML+ AV+ A + +LD VLSVE VGV+KPHP VYGLA + L + P I++QSSNAWDA+AASAFGMRVVWCNRYGQR ERLPG
Sbjct: 34 LGDKFERLTALWREKQLQYTWLRALQARHADFWQVTGDALDFAMETLGIADPALRERLMRLYLSLDAFPEVPDMLRRLKAAGLKTAILSNGSPRMLSAAVENAKIADLLDAVLSVEDVGVYKPHPRVYGLAAEQLGIEPAAISYQSSNAWDAYAASAFGMRVVWCNRYGQRPERLPG 210
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: UPI001ADAA8D5 (haloacid dehalogenase type II n=1 Tax=Aquabacter sp. L1I39 TaxID=2820278 RepID=UPI001ADAA8D5) HSP 1 Score: 251 bits (641), Expect = 4.110e-82 Identity = 125/176 (71.02%), Postives = 138/176 (78.41%), Query Frame = 1
Query: 4 GDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
G+K L A+WRDKQLQYTWLR QGRHADF QVT DALDF++E+LGI G LRA L+DLY TL FPEVP VL+ LK AG AILSNG P MLA AV GAGL G+ D V+S E VGVFKPHP VY A+ LD+A ++AFQSSNAWDAHAASAFGMRVVWCNRYGQR ERLPG
Sbjct: 35 GEKRGALGALWRDKQLQYTWLRAAQGRHADFHQVTGDALDFALETLGIAGPDLRAHLMDLYLTLAVFPEVPGVLRRLKAAGMRLAILSNGTPAMLAAAVGGAGLDGLFDAVISAEDVGVFKPHPAVYQHALDRLDLAAPQLAFQSSNAWDAHAASAFGMRVVWCNRYGQRPERLPG 210
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A6L5FF49_9HYPH ((S)-2-haloacid dehalogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FF49_9HYPH) HSP 1 Score: 250 bits (639), Expect = 8.000e-82 Identity = 124/176 (70.45%), Postives = 140/176 (79.55%), Query Frame = 1
Query: 4 GDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
DK LTA+WRDKQLQYTWLR LQG HADFWQVT DALDF++E+L +E LR L+ LY TL FPEVP VL+ LK+AG TAILSNG+P ML AVK AGL +LD VLSVE+VGVFKP P VY LA+ L + TEI+FQSSNAWDA+AASAFGMRV+WCNRYGQRRERLPG
Sbjct: 35 ADKMGALTALWRDKQLQYTWLRSLQGIHADFWQVTGDALDFAIETLKLERPRLRDSLMQLYLTLDAFPEVPSVLERLKRAGLRTAILSNGSPRMLDAAVKNAGLAELLDDVLSVEEVGVFKPSPKVYQLAIDRLGLPATEISFQSSNAWDAYAASAFGMRVIWCNRYGQRRERLPG 210
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A1Q7BF15_9PROT ((S)-2-haloacid dehalogenase n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BF15_9PROT) HSP 1 Score: 250 bits (639), Expect = 8.830e-82 Identity = 124/177 (70.06%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGD LTA+WRDKQLQYTWLR +QGRHADFWQVT DALDF++E+L IE + LR RL++LY TL+ FPEVP+VL+ LK AG TAILSNG+P ML AV+ +GL +LD VLSVE VGV+KPHP VY LAV L + IAF SSNAWDA+AASAFGMRVVWCNRYGQR ERLPG
Sbjct: 34 LGDAIEKLTALWRDKQLQYTWLRAVQGRHADFWQVTGDALDFALETLAIEKSGLRDRLMNLYLTLEPFPEVPEVLRRLKTAGLRTAILSNGSPMMLDAAVRESGLSTLLDAVLSVESVGVYKPHPKVYQLAVDRLGIPAAAIAFHSSNAWDAYAASAFGMRVVWCNRYGQRPERLPG 210
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: A0A176YXL5_9BRAD ((S)-2-haloacid dehalogenase n=1 Tax=Bradyrhizobium centrolobii TaxID=1505087 RepID=A0A176YXL5_9BRAD) HSP 1 Score: 250 bits (639), Expect = 8.830e-82 Identity = 122/177 (68.93%), Postives = 141/177 (79.66%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LGD LTA+WR+KQLQYTWLR QGRHADFWQVT DALDFS+E+L ++ LR RL++LY TL FPEVP VL+ LK G TAILSNG P ML AVK AG+ G+LDHVLSVE+VGV+KP P VY LAV L V ++I+FQSSNAWDA+AAS+FGMRVVWCNRY QR+ERLPG
Sbjct: 34 LGDSFDKLTALWREKQLQYTWLRAAQGRHADFWQVTGDALDFSLETLMLKQPGLRDRLMELYLTLDTFPEVPDVLRQLKATGLKTAILSNGTPEMLDSAVKNAGIDGLLDHVLSVEEVGVYKPDPRVYQLAVDQLGVPASQISFQSSNAWDAYAASSFGMRVVWCNRYRQRKERLPG 210
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Match: UPI001ADF6E1C (haloacid dehalogenase type II n=1 Tax=Roseomonas sp. SSH11 TaxID=2820812 RepID=UPI001ADF6E1C) HSP 1 Score: 249 bits (637), Expect = 1.560e-81 Identity = 118/177 (66.67%), Postives = 141/177 (79.66%), Query Frame = 1
Query: 1 LGDKAATLTAMWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDLYRTLQCFPEVPQVLKDLKQAGFVTAILSNGAPGMLADAVKGAGLGGVLDHVLSVEQVGVFKPHPDVYGLAVKTLDVAPTEIAFQSSNAWDAHAASAFGMRVVWCNRYGQRRERLPG 531
LG +A LT +WRDKQLQY WLR LQ + DFWQVT D+LDF++E+LG+ LR +L+ LYR LQ FPEVP+VL+ L++AGFVTAILSNG+P ML AV+ AG+G LD VLSV+++G++KPHP VY LAV L V IAFQSSN WDAHAA+AFGMRVVWCNRYGQRRERLPG
Sbjct: 33 LGSQAGPLTTLWRDKQLQYAWLRSLQDHYVDFWQVTGDSLDFALETLGLADPELREQLMGLYRRLQPFPEVPEVLRQLREAGFVTAILSNGSPDMLGSAVQSAGIGAHLDAVLSVDELGIYKPHPRVYQLAVDRLGVPAEAIAFQSSNGWDAHAAAAFGMRVVWCNRYGQRRERLPG 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54083.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54083.1.1 >prot_P-wetherbeei_contig54083.1.1 ID=prot_P-wetherbeei_contig54083.1.1|Name=mRNA_P-wetherbeei_contig54083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp MWRDKQLQYTWLRGLQGRHADFWQVTSDALDFSMESLGIEGAALRARLLDback to top mRNA from alignment at P-wetherbeei_contig54083:2..532- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54083.1.1 ID=mRNA_P-wetherbeei_contig54083.1.1|Name=mRNA_P-wetherbeei_contig54083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54083:2..532- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54083:2..532- >mRNA_P-wetherbeei_contig54083.1.1 ID=mRNA_P-wetherbeei_contig54083.1.1|Name=mRNA_P-wetherbeei_contig54083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig54083:2..532- (Phaeothamnion wetherbeei SAG_119_79)back to top |