prot_P-wetherbeei_contig5406.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5406.3.1
Unique Nameprot_P-wetherbeei_contig5406.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length73
Homology
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BLAST of mRNA_P-wetherbeei_contig5406.3.1 vs. uniprot
Match: A0A6A4WEQ2_AMPAM (Protein lap4 n=5 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WEQ2_AMPAM)

HSP 1 Score: 50.4 bits (119), Expect = 2.010e-5
Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 0 
Query:   14 TEDVTLRK---PLGLVLEGRTD----PTTGENLGVFVRSMQPGLSAERSGRIRPGDRIAAVSST 70
            TEDVTL K   PLGL + G  D    P   +  G FV  + PG  AER+GR+R GDR+ AV+ +
Sbjct: 1156 TEDVTLNKAGGPLGLSIIGGADHSCLPFGRQQSGTFVSKLTPGGPAERTGRLRVGDRLLAVNGS 1219
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5406.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6A4WEQ2_AMPAM2.010e-546.88Protein lap4 n=5 Tax=Amphibalanus amphitrite TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 2..71
e-value: 5.8E-12
score: 47.4
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 15..68
IPR001478PDZ domainPFAMPF00595PDZcoord: 19..67
e-value: 1.3E-7
score: 31.9
IPR001478PDZ domainPROSITEPS50106PDZcoord: 23..73
score: 12.6669

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5406contigP-wetherbeei_contig5406:2974..3192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5406.3.1mRNA_P-wetherbeei_contig5406.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5406 2974..3192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5406.3.1 ID=prot_P-wetherbeei_contig5406.3.1|Name=mRNA_P-wetherbeei_contig5406.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=73bp
PQTINRFREAVDQTEDVTLRKPLGLVLEGRTDPTTGENLGVFVRSMQPGL
SAERSGRIRPGDRIAAVSSTLGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ