mRNA_P-wetherbeei_contig54046.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54046.2.1
Unique NamemRNA_P-wetherbeei_contig54046.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: UPI001F5C0CFF (GNAT family N-acetyltransferase n=2 Tax=Nocardioides sp. S5 TaxID=2017486 RepID=UPI001F5C0CFF)

HSP 1 Score: 187 bits (476), Expect = 2.070e-59
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH
Sbjct:    1 MLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A6L6AMZ9_9ACTN (GNAT family N-acetyltransferase n=3 Tax=root TaxID=1 RepID=A0A6L6AMZ9_9ACTN)

HSP 1 Score: 177 bits (450), Expect = 2.070e-55
Identity = 81/88 (92.05%), Postives = 86/88 (97.73%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPEPT RLRFRPMT+ADLDD+TTLLSAPDPV VDRPARDRDDAVRWIEWQERNYADHGFGLWVVETH+GEFVGDCGLTVQ+VEGEPH
Sbjct:    1 MLPEPTERLRFRPMTMADLDDMTTLLSAPDPVLVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHEGEFVGDCGLTVQEVEGEPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A1I1A7X3_9ACTN (Protein N-acetyltransferase, RimJ/RimL family n=1 Tax=Nocardioides alpinus TaxID=748909 RepID=A0A1I1A7X3_9ACTN)

HSP 1 Score: 172 bits (435), Expect = 3.390e-53
Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPEPTARLRFRPMT+ADLDD+T +LSAPDPVRVDRPAR RDDAVRWIEWQERNYA H FGLWVVETHDGEFVGDCGLTVQDVEG PH
Sbjct:    1 MLPEPTARLRFRPMTMADLDDMTAVLSAPDPVRVDRPARSRDDAVRWIEWQERNYAAHDFGLWVVETHDGEFVGDCGLTVQDVEGTPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A4Q2RVE4_9ACTN (N-acetyltransferase n=1 Tax=Nocardioides oleivorans TaxID=273676 RepID=A0A4Q2RVE4_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 3.910e-45
Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPEPT RLRFR M ++DLDD+T +L APDPV  DRPAR RDDAVRWIEWQ RNY +H FGLWVVETH GEFVGDCGLTVQDVEG PH
Sbjct:    1 MLPEPTERLRFRRMEMSDLDDITAVLEAPDPVVFDRPARTRDDAVRWIEWQARNYTEHDFGLWVVETHAGEFVGDCGLTVQDVEGTPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A0Q6UG21_9ACTN (N-acetyltransferase domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A0Q6UG21_9ACTN)

HSP 1 Score: 145 bits (365), Expect = 1.410e-42
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPE T RLRFR MT++DL+DVT +L   DP+R DRP  +RDDAVRW+EWQERN+A+HGFGLWV+ETHDG+F+GDCGLTVQDVEG PH
Sbjct:    1 MLPESTERLRFRRMTMSDLNDVTAMLRDFDPMRGDRPPSNRDDAVRWVEWQERNHAEHGFGLWVLETHDGDFIGDCGLTVQDVEGTPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A7Y9KSC6_9ACTN (RimJ/RimL family protein N-acetyltransferase n=2 Tax=Nocardioides cavernae TaxID=1921566 RepID=A0A7Y9KSC6_9ACTN)

HSP 1 Score: 143 bits (360), Expect = 8.620e-42
Identity = 68/88 (77.27%), Postives = 72/88 (81.82%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LPEPTARLRFRPM   D+D VT LL A DP R DRP   R+DAVRWIEWQER YADH FGLWVVETH+GE VGDCGLTVQDVEG PH
Sbjct:    1 MLPEPTARLRFRPMVRDDVDVVTELLIAFDPFRGDRPPSTREDAVRWIEWQERTYADHDFGLWVVETHEGEIVGDCGLTVQDVEGTPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A4Q2SB54_9ACTN (N-acetyltransferase n=3 Tax=Nocardioides ganghwensis TaxID=252230 RepID=A0A4Q2SB54_9ACTN)

HSP 1 Score: 142 bits (359), Expect = 1.300e-41
Identity = 65/75 (86.67%), Postives = 68/75 (90.67%), Query Frame = 1
Query:   40 MTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            M +ADLDDVT LLSAPDPVR+DRPAR RDDAVRWIEWQ RNYA+HGFGLWVVETH G FVGDCGLTVQDVEG PH
Sbjct:    1 MVMADLDDVTALLSAPDPVRLDRPARTRDDAVRWIEWQGRNYAEHGFGLWVVETHAGNFVGDCGLTVQDVEGTPH 75          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: UPI001F3B014B (GNAT family N-acetyltransferase n=1 Tax=Nocardioides sp. KLBMP 9356 TaxID=2911371 RepID=UPI001F3B014B)

HSP 1 Score: 140 bits (353), Expect = 9.980e-41
Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 1
Query:    1 VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            +LP+PT RL FR MT+AD+D VT +L A DP+R DRP   RDDAVRWIEWQERNY++H FGLWVVET DG FVGDCGLTVQDVEG PH
Sbjct:    1 MLPDPTDRLTFRAMTMADIDAVTEMLVAFDPMRGDRPPSTRDDAVRWIEWQERNYSEHDFGLWVVETRDGAFVGDCGLTVQDVEGTPH 88          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: UPI001551B083 (GNAT family N-acetyltransferase n=1 Tax=Nocardioides sp. zg-1308 TaxID=2736253 RepID=UPI001551B083)

HSP 1 Score: 137 bits (345), Expect = 1.110e-39
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 1
Query:   40 MTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEG 255
            MT+ADLDDVT LL+APDPV VDRPAR  DDAVRWIEWQERNYA HGFGLWV+ETHDG FVGDCGLTVQDVEG
Sbjct:    1 MTMADLDDVTALLTAPDPVPVDRPARTPDDAVRWIEWQERNYAAHGFGLWVIETHDGVFVGDCGLTVQDVEG 72          
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Match: A0A4Q2T058_9ACTN (N-acetyltransferase n=2 Tax=Nocardioides zhouii TaxID=1168729 RepID=A0A4Q2T058_9ACTN)

HSP 1 Score: 135 bits (341), Expect = 4.380e-39
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 1
Query:   40 MTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEWQERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH 264
            M  ADLDD+T +LSAPDPV VDRP RDRDDAVRWIEWQ+RNYA+H FGLWVVETHDG FVGDCGLT+QDVEG  H
Sbjct:    1 MEEADLDDMTAVLSAPDPVHVDRPPRDRDDAVRWIEWQQRNYAEHDFGLWVVETHDGTFVGDCGLTMQDVEGTAH 75          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54046.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F5C0CFF2.070e-5998.86GNAT family N-acetyltransferase n=2 Tax=Nocardioid... [more]
A0A6L6AMZ9_9ACTN2.070e-5592.05GNAT family N-acetyltransferase n=3 Tax=root TaxID... [more]
A0A1I1A7X3_9ACTN3.390e-5389.77Protein N-acetyltransferase, RimJ/RimL family n=1 ... [more]
A0A4Q2RVE4_9ACTN3.910e-4578.41N-acetyltransferase n=1 Tax=Nocardioides oleivoran... [more]
A0A0Q6UG21_9ACTN1.410e-4272.73N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7Y9KSC6_9ACTN8.620e-4277.27RimJ/RimL family protein N-acetyltransferase n=2 T... [more]
A0A4Q2SB54_9ACTN1.300e-4186.67N-acetyltransferase n=3 Tax=Nocardioides ganghwens... [more]
UPI001F3B014B9.980e-4173.86GNAT family N-acetyltransferase n=1 Tax=Nocardioid... [more]
UPI001551B0831.110e-3987.50GNAT family N-acetyltransferase n=1 Tax=Nocardioid... [more]
A0A4Q2T058_9ACTN4.380e-3981.33N-acetyltransferase n=2 Tax=Nocardioides zhouii Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54046contigP-wetherbeei_contig54046:271..534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog110319.CF8_2829
PFAMsAcetyltransf_3
Model size264
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.2e-30
EggNOG OGsCOG1670@1|root,COG1670@2|Bacteria,2IP23@201174|Actinobacteria
DescriptionAcetyltransferase (GNAT) domain
Cds size264
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186808.0371041-CDS-P-wetherbeei_contig54046:270..5341683186808.0371041-CDS-P-wetherbeei_contig54046:270..534Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54046 271..534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54046.2.1prot_P-wetherbeei_contig54046.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54046 271..534 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54046.2.1

>prot_P-wetherbeei_contig54046.2.1 ID=prot_P-wetherbeei_contig54046.2.1|Name=mRNA_P-wetherbeei_contig54046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
VLPEPTARLRFRPMTIADLDDVTTLLSAPDPVRVDRPARDRDDAVRWIEW
QERNYADHGFGLWVVETHDGEFVGDCGLTVQDVEGEPH
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mRNA from alignment at P-wetherbeei_contig54046:271..534+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54046.2.1 ID=mRNA_P-wetherbeei_contig54046.2.1|Name=mRNA_P-wetherbeei_contig54046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig54046:271..534+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGCCAGAGCCCACCGCGCGCCTGCGCTTCCGTCCGATGACGATCGC CGACCTCGACGACGTGACGACACTGCTCTCGGCGCCGGACCCCGTCCGGG TGGACCGGCCGGCCCGCGACCGCGACGACGCCGTGCGCTGGATCGAGTGG CAGGAGCGCAACTACGCCGACCACGGGTTCGGGCTGTGGGTGGTCGAGAC CCACGACGGCGAGTTCGTCGGCGACTGCGGCCTGACGGTGCAGGACGTGG AGGGCGAGCCCCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54046:271..534+

>mRNA_P-wetherbeei_contig54046.2.1 ID=mRNA_P-wetherbeei_contig54046.2.1|Name=mRNA_P-wetherbeei_contig54046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig54046:271..534+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCTGCCAGAGCCCACCGCGCGCCTGCGCTTCCGTCCGATGACGATCGC
CGACCTCGACGACGTGACGACACTGCTCTCGGCGCCGGACCCCGTCCGGG
TGGACCGGCCGGCCCGCGACCGCGACGACGCCGTGCGCTGGATCGAGTGG
CAGGAGCGCAACTACGCCGACCACGGGTTCGGGCTGTGGGTGGTCGAGAC
CCACGACGGCGAGTTCGTCGGCGACTGCGGCCTGACGGTGCAGGACGTGG
AGGGCGAGCCCCAC
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