prot_P-wetherbeei_contig5404.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: D8LC63_ECTSI (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC63_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.000e-49 Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKL D+Q+VDAERYPQL ++K+CFIRGS VRYIQI +A+VDTELLQDACRKE+A
Sbjct: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTDVQVVDAERYPQLGAIKNCFIRGSVVRYIQIPSADVDTELLQDACRKESA 91
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A7S3PVL2_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVL2_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.010e-47 Identity = 74/91 (81.32%), Postives = 84/91 (92.31%), Query Frame = 0
Query: 1 QLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
QLFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKLN++Q+VD ++YPQL ++K+CFIRGS VRYIQI + EVDTELLQDA RKENA
Sbjct: 12 QLFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLALKNCFIRGSVVRYIQIPSGEVDTELLQDAARKENA 102
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A835YRK1_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK1_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.850e-47 Identity = 74/90 (82.22%), Postives = 83/90 (92.22%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
LFYSFFKTLVGKE+AVELKNDV+LTGTLHSVDQYLNVKL +++VD ER+PQL ++K CFIRGS VRYIQI A+EVDTELLQDACRKENA
Sbjct: 2 LFYSFFKTLVGKEVAVELKNDVSLTGTLHSVDQYLNVKLTGVKVVDEERFPQLGALKGCFIRGSAVRYIQIPASEVDTELLQDACRKENA 91
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A7S3PVB5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVB5_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.050e-46 Identity = 73/90 (81.11%), Postives = 83/90 (92.22%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
LFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKLN++Q+VD ++YPQL ++K+CFIRGS VRYIQI + EVDTELLQDA RKENA
Sbjct: 44 LFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVQVVDKQKYPQLLALKNCFIRGSVVRYIQIPSGEVDTELLQDAARKENA 133
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A6U3SK19_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SK19_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.660e-45 Identity = 71/88 (80.68%), Postives = 81/88 (92.05%), Query Frame = 0
Query: 3 FYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKEN 90
F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KL D+Q+VDAER+PQL +MK+CFIRGS VRY+QI AEVDTELLQDA R++N
Sbjct: 6 FNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDAERFPQLTAMKNCFIRGSVVRYVQIPGAEVDTELLQDAARQQN 93
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A7S2U7M8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7M8_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.360e-44 Identity = 71/90 (78.89%), Postives = 81/90 (90.00%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
LFYSFFKTLVGKE+A+ELKNDV LTGTLHSVDQYLNVKL D+Q+V+ E+YPQL +++CFIRGS VRYIQIA +VDTELLQDA RKENA
Sbjct: 39 LFYSFFKTLVGKEVAIELKNDVVLTGTLHSVDQYLNVKLTDVQVVNKEQYPQLVPLRNCFIRGSVVRYIQIAPGDVDTELLQDATRKENA 128
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A024U6S4_9STRA (U6 snRNA-associated Sm-like protein LSm2 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6S4_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.050e-43 Identity = 68/88 (77.27%), Postives = 79/88 (89.77%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKE 89
LFYSFFKTL+GKE+AVELKNDVAL GTLHSVDQYLN+KL D+ +V+ +YPQL +MK+CFIRGS VRYIQIA A+VDTELLQDA R+E
Sbjct: 2 LFYSFFKTLIGKEVAVELKNDVALVGTLHSVDQYLNIKLTDVSVVEENKYPQLMNMKNCFIRGSVVRYIQIAKADVDTELLQDAARRE 89
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A7S4K237_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K237_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.550e-43 Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 0
Query: 2 LFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKENA 91
LFYSFFKTLVGKE+AVELKNDV LTGTLHSVDQYLNVKLN++ +VD RYPQL ++ + F+RGS VRYIQI A +VDTELLQDA RKENA
Sbjct: 4 LFYSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNVKLNNVSVVDKGRYPQLLTLNNVFVRGSVVRYIQIPAGDVDTELLQDAARKENA 93
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: A0A7S2RW57_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW57_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.890e-43 Identity = 69/87 (79.31%), Postives = 81/87 (93.10%), Query Frame = 0
Query: 3 FYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKE 89
F SFFKTL+GKEIAVELKNDVALTGTLHSVDQYLN+KL D+Q+VD+ER+PQL +MK+CFIRGS VRY+QI A+EVDTELLQDA R++
Sbjct: 49 FNSFFKTLIGKEIAVELKNDVALTGTLHSVDQYLNIKLTDVQVVDSERFPQLQAMKNCFIRGSVVRYVQIPASEVDTELLQDAARQQ 135
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Match: B8BUU1_THAPS (Sm domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUU1_THAPS) HSP 1 Score: 144 bits (362), Expect = 5.570e-43 Identity = 68/90 (75.56%), Postives = 80/90 (88.89%), Query Frame = 0
Query: 1 QLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLNDIQIVDAERYPQLCSMKSCFIRGSTVRYIQIAAAEVDTELLQDACRKEN 90
QLF+SFFKTLVGKEIAVELKNDV LTGTLHSVDQYLN+KL ++ +V+ ++YPQL S+K+CFIRGS VRY+QI +VDTELLQDA RKEN
Sbjct: 1 QLFFSFFKTLVGKEIAVELKNDVVLTGTLHSVDQYLNIKLTNVSVVNQDKYPQLMSLKNCFIRGSVVRYVQINPNDVDTELLQDATRKEN 90 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5404.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig5404.1.1 ID=prot_P-wetherbeei_contig5404.1.1|Name=mRNA_P-wetherbeei_contig5404.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bpback to top |