mRNA_P-wetherbeei_contig54015.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig54015.1.1
Unique NamemRNA_P-wetherbeei_contig54015.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A371B1D2_9HYPH (Enoyl-CoA hydratase n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B1D2_9HYPH)

HSP 1 Score: 265 bits (676), Expect = 8.100e-87
Identity = 140/176 (79.55%), Postives = 155/176 (88.07%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P ARNSLSEALLIAL +A+ A+AAD ++ AVVL ANGPAFCAGHDLKELT+RR+DADGGR YF+ IMT CSGMMQQIVNLP+PVIAAVQGVA+AAGCQLVASCDLA+ASE AKFATPGVDIGLFCSTPMVALSRNV RK AMEMLLTG+M  A  AA IGL+NR+V AG E  EA+
Sbjct:   30 PQARNSLSEALLIALSEAWTAMAADTSIRAVVLTANGPAFCAGHDLKELTARRSDADGGRAYFHQIMTICSGMMQQIVNLPKPVIAAVQGVATAAGCQLVASCDLAIASEAAKFATPGVDIGLFCSTPMVALSRNVPRKQAMEMLLTGDMVPAQRAADIGLVNRMVPAGQERAEAI 205          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A0Q7TZP2_9HYPH (Enoyl-CoA hydratase n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TZP2_9HYPH)

HSP 1 Score: 263 bits (671), Expect = 4.970e-86
Identity = 140/176 (79.55%), Postives = 155/176 (88.07%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P ARNSLSEALLIAL +A+ A AA+  + AVVL A GPAF AGHD+KELT+RR DADGGR YF+ IMT CSGMMQQIV+LP+PVIAAVQGVA+AAGCQLVASCDLAVAS+ A+FATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEM SA  AA+IGLINRVV AG+E  EA+
Sbjct:   32 PQARNSLSEALLIALSEAWTATAAESAIRAVVLTATGPAFSAGHDMKELTARRADADGGRAYFHQIMTVCSGMMQQIVSLPKPVIAAVQGVATAAGCQLVASCDLAVASDAARFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMISAERAAQIGLINRVVPAGSERAEAI 207          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A127EY64_9HYPH (Enoyl-CoA hydratase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EY64_9HYPH)

HSP 1 Score: 256 bits (655), Expect = 1.290e-83
Identity = 138/177 (77.97%), Postives = 151/177 (85.31%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEALK 531
            PAARNSLSE LL+ L DAF AIAA++ + AVVL ANG AFCAGHDLKEL+SRRTDADGGR YF HIMTTCS MMQQIVNL QPVIA+VQGVASAAGCQLVASCDLAVASE A FATPGVDIGLFCSTPMVALSRNV+RKHAMEMLL+GE+  A  AA +GL+N VV  G +   AL+
Sbjct:   31 PAARNSLSEQLLVMLGDAFTAIAANKEIHAVVLAANGTAFCAGHDLKELSSRRTDADGGRAYFRHIMTTCSAMMQQIVNLRQPVIASVQGVASAAGCQLVASCDLAVASEQAGFATPGVDIGLFCSTPMVALSRNVARKHAMEMLLSGEIVPAERAAAMGLVNAVVPHGEQHGRALE 207          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A1Q4DQX4_9HYPH (Enoyl-CoA hydratase n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DQX4_9HYPH)

HSP 1 Score: 254 bits (648), Expect = 1.400e-82
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P  RN+LSEA+L AL +A  AIAAD++V A++L ANGPAFCAGHDLKELT+RR+D DGGR YF  IMT CS MMQQIV +PQPVIA V GVA+AAGCQLVASCDLAVAS  AKFATPGVDIGLFCSTPMVALSRNVSRKHAM MLLTG+M SA +A RIGL+N V A G E+D AL
Sbjct:   29 PERRNALSEAMLAALSNALTAIAADKSVRAIILAANGPAFCAGHDLKELTARRSDEDGGRAYFATIMTACSAMMQQIVAMPQPVIAVVHGVATAAGCQLVASCDLAVASSAAKFATPGVDIGLFCSTPMVALSRNVSRKHAMAMLLTGDMVSADEAQRIGLVNAVAAPGAEMDAAL 204          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A345ZTG0_9HYPH (Enoyl-CoA hydratase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZTG0_9HYPH)

HSP 1 Score: 254 bits (648), Expect = 1.450e-82
Identity = 137/171 (80.12%), Postives = 147/171 (85.96%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTE 513
            PAARNSLSE LL AL   F  IA D+++ A+VL ANG AF AGHDLKELTSRRTDADGGR YF HIMTTCS MMQ+IVNLPQPVIAAVQGVA+AAGCQLVASCDLAVASE A+FATPGVDIGLFCSTPMVALSRNV+ KHAMEMLLTGEM  A  AA +GL+NRVVA G E
Sbjct:   30 PAARNSLSEDLLNALFITFDDIATDKSIRAIVLAANGVAFSAGHDLKELTSRRTDADGGRAYFKHIMTTCSAMMQKIVNLPQPVIAAVQGVATAAGCQLVASCDLAVASEAARFATPGVDIGLFCSTPMVALSRNVAPKHAMEMLLTGEMIEADRAAAMGLVNRVVAPGEE 200          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A2V5XMC5_9BACT (Enoyl-CoA hydratase n=5 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5XMC5_9BACT)

HSP 1 Score: 254 bits (648), Expect = 2.270e-82
Identity = 136/176 (77.27%), Postives = 151/176 (85.80%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P ARNSLSEALL AL DAF  IA +++V AVVL ANGPAF AGHDLKEL S R+D+D GR YF +IM  CS +MQQIVNLPQPV AAVQGVA+AAGCQLVASCDLAVAS  AKFATPGV++GLFCSTPMVALSRNV+RKHAMEMLLTG+M SAADA RIGL+NRVV +G E +EAL
Sbjct:   44 PEARNSLSEALLAALGDAFTEIAHERSVRAVVLAANGPAFSAGHDLKELKSHRSDSDRGRAYFKYIMEMCSTVMQQIVNLPQPVAAAVQGVATAAGCQLVASCDLAVASAAAKFATPGVNVGLFCSTPMVALSRNVARKHAMEMLLTGDMISAADALRIGLVNRVVPSGNEREEAL 219          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A2V5KM02_9BACT (Enoyl-CoA hydratase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5KM02_9BACT)

HSP 1 Score: 251 bits (640), Expect = 3.710e-81
Identity = 136/176 (77.27%), Postives = 148/176 (84.09%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P ARNSLSEALL AL DAF  IA ++ V AVVL ANGPAF AGHDLKEL S R D+D GR YF +IM  CS +MQQIVNLPQPVIA VQGVA+AAGCQLVASCDLAVAS  AKFATPGV++GLFCSTPMVALSRNV+RKHAMEMLLTG+M SA DA RIGL+NRVVA G E +EAL
Sbjct:   44 PEARNSLSEALLGALGDAFTEIAHERNVRAVVLAANGPAFSAGHDLKELKSHRADSDRGRAYFKYIMEMCSAVMQQIVNLPQPVIATVQGVATAAGCQLVASCDLAVASIAAKFATPGVNVGLFCSTPMVALSRNVARKHAMEMLLTGDMISAEDALRIGLVNRVVAPGREPEEAL 219          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A1W7A0J1_9HYPH (Enoyl-CoA hydratase n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W7A0J1_9HYPH)

HSP 1 Score: 248 bits (634), Expect = 2.060e-80
Identity = 131/175 (74.86%), Postives = 147/175 (84.00%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEA 525
            PAARNSLSE L+ AL DAF +IA D  +  VV+ ANGPAF AGHDLKELT+RR DADGG+ YF HIMT CS MMQ+IV LPQPVIA V GVA+AAGCQLVA+CDLA+AS  A+FATPGVDIGLFCSTPMVAL+RNV RK+AM MLLTG+  SA +AARIGL+NRVV AGTE DEA
Sbjct:   32 PAARNSLSENLIKALSDAFDSIAQDGAIRVVVIAANGPAFSAGHDLKELTARRADADGGKAYFKHIMTICSAMMQKIVALPQPVIAVVSGVATAAGCQLVATCDLAIASADARFATPGVDIGLFCSTPMVALTRNVPRKNAMHMLLTGDPVSADEAARIGLVNRVVPAGTERDEA 206          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A537NF73_9PROT (Enoyl-CoA hydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NF73_9PROT)

HSP 1 Score: 246 bits (627), Expect = 2.230e-79
Identity = 129/176 (73.30%), Postives = 144/176 (81.82%), Query Frame = 1
Query:    1 PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEAL 528
            P  RN+LSEA+L +  +    IAAD+ V AVVL ANGP FCAGHDLKELT+RR DADGG+ YF +IM TCS +MQ IV LPQPVIAAVQG+A+AAGCQLVASCDLAVAS  AKF TPGVDIGLFCSTPMVALSRNV+ KHAMEMLLTG+M SA +A RIGL+NRVV  G E D AL
Sbjct:   30 PEQRNTLSEAMLASFAEVLAQIAADRAVRAVVLAANGPVFCAGHDLKELTARRADADGGKSYFQYIMETCSSVMQAIVGLPQPVIAAVQGLATAAGCQLVASCDLAVASAQAKFCTPGVDIGLFCSTPMVALSRNVATKHAMEMLLTGDMISADEAQRIGLVNRVVEPGRETDAAL 205          
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Match: A0A537L925_9PROT (Enoyl-CoA hydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L925_9PROT)

HSP 1 Score: 245 bits (625), Expect = 4.780e-79
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 1
Query:    7 ARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELTSRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLVASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEMTSAADAARIGLINRVVAAGTELDEALK 531
            ARNSLSEAL+ AL ++   IA D+    VVL ANGP+FCAGHD+KE+T+RR+D D GR YF  +M  C+ MMQ IV+LP+PVIAAVQG ASAAGCQLVASCDLA+AS  AKFATPGV+IGLFCSTPMVALSRNVSRK AMEMLLTGE+ SA DA RIGL+NRVVA GTE DEALK
Sbjct:   34 ARNSLSEALIAALTESLAEIATDKRARVVVLAANGPSFCAGHDMKEMTARRSDTDRGRAYFKQLMDACATMMQAIVHLPKPVIAAVQGPASAAGCQLVASCDLAIASSAAKFATPGVNIGLFCSTPMVALSRNVSRKAAMEMLLTGELMSADDAQRIGLVNRVVAPGTERDEALK 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A371B1D2_9HYPH8.100e-8779.55Enoyl-CoA hydratase n=2 Tax=unclassified Pseudolab... [more]
A0A0Q7TZP2_9HYPH4.970e-8679.55Enoyl-CoA hydratase n=1 Tax=Pseudolabrys sp. Root1... [more]
A0A127EY64_9HYPH1.290e-8377.97Enoyl-CoA hydratase n=1 Tax=Rhodoplanes sp. Z2-YC6... [more]
A0A1Q4DQX4_9HYPH1.400e-8275.57Enoyl-CoA hydratase n=1 Tax=Rhizobiales bacterium ... [more]
A0A345ZTG0_9HYPH1.450e-8280.12Enoyl-CoA hydratase n=1 Tax=Pseudolabrys taiwanens... [more]
A0A2V5XMC5_9BACT2.270e-8277.27Enoyl-CoA hydratase n=5 Tax=Verrucomicrobia bacter... [more]
A0A2V5KM02_9BACT3.710e-8177.27Enoyl-CoA hydratase n=1 Tax=Verrucomicrobia bacter... [more]
A0A1W7A0J1_9HYPH2.060e-8074.86Enoyl-CoA hydratase n=1 Tax=Pseudorhodoplanes sinu... [more]
A0A537NF73_9PROT2.230e-7973.30Enoyl-CoA hydratase n=1 Tax=Alphaproteobacteria ba... [more]
A0A537L925_9PROT4.780e-7973.71Enoyl-CoA hydratase n=1 Tax=Alphaproteobacteria ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig54015contigP-wetherbeei_contig54015:3..533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog398525.KB900701_gene5305
Preferred nameMA20_36945
PFAMsECH_1
Model size531
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.27e-79
EggNOG OGsCOG1024@1|root,COG1024@2|Bacteria,1MUJ7@1224|Proteobacteria,2TTMB@28211|Alphaproteobacteria,3JRTP@41294|Bradyrhizobiaceae
Descriptionenoyl-CoA hydratase
Cds size531
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186807.5053718-CDS-P-wetherbeei_contig54015:2..5331683186807.5053718-CDS-P-wetherbeei_contig54015:2..533Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig54015 3..533 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig54015.1.1prot_P-wetherbeei_contig54015.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig54015 3..533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig54015.1.1

>prot_P-wetherbeei_contig54015.1.1 ID=prot_P-wetherbeei_contig54015.1.1|Name=mRNA_P-wetherbeei_contig54015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
PAARNSLSEALLIALRDAFRAIAADQTVSAVVLVANGPAFCAGHDLKELT
SRRTDADGGRGYFNHIMTTCSGMMQQIVNLPQPVIAAVQGVASAAGCQLV
ASCDLAVASETAKFATPGVDIGLFCSTPMVALSRNVSRKHAMEMLLTGEM
TSAADAARIGLINRVVAAGTELDEALK
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mRNA from alignment at P-wetherbeei_contig54015:3..533+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig54015.1.1 ID=mRNA_P-wetherbeei_contig54015.1.1|Name=mRNA_P-wetherbeei_contig54015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54015:3..533+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGCGGCGCGCAACAGTCTGTCCGAGGCATTGCTGATCGCGCTGCGCGA CGCCTTTCGCGCCATCGCGGCCGACCAGACGGTGTCGGCGGTGGTGCTGG TCGCCAACGGGCCGGCCTTCTGCGCCGGCCACGACCTCAAGGAATTGACC AGCCGCCGCACCGACGCGGACGGCGGGCGCGGCTATTTCAACCACATCAT GACGACCTGCAGCGGCATGATGCAGCAGATCGTGAACCTGCCGCAGCCGG TGATCGCGGCGGTGCAAGGGGTCGCCTCGGCCGCCGGATGCCAGCTGGTC GCGAGCTGCGATCTCGCGGTCGCCTCCGAGACCGCGAAGTTCGCCACGCC CGGTGTCGACATCGGCCTGTTCTGCTCGACGCCGATGGTGGCGCTGTCGC GCAACGTTTCGCGCAAGCACGCCATGGAAATGCTGCTCACCGGCGAGATG ACATCGGCCGCCGACGCCGCGCGCATCGGGCTGATCAACCGCGTGGTTGC GGCAGGGACCGAGCTCGACGAGGCACTGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig54015:3..533+

>mRNA_P-wetherbeei_contig54015.1.1 ID=mRNA_P-wetherbeei_contig54015.1.1|Name=mRNA_P-wetherbeei_contig54015.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig54015:3..533+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGCGGCGCGCAACAGTCTGTCCGAGGCATTGCTGATCGCGCTGCGCGA
CGCCTTTCGCGCCATCGCGGCCGACCAGACGGTGTCGGCGGTGGTGCTGG
TCGCCAACGGGCCGGCCTTCTGCGCCGGCCACGACCTCAAGGAATTGACC
AGCCGCCGCACCGACGCGGACGGCGGGCGCGGCTATTTCAACCACATCAT
GACGACCTGCAGCGGCATGATGCAGCAGATCGTGAACCTGCCGCAGCCGG
TGATCGCGGCGGTGCAAGGGGTCGCCTCGGCCGCCGGATGCCAGCTGGTC
GCGAGCTGCGATCTCGCGGTCGCCTCCGAGACCGCGAAGTTCGCCACGCC
CGGTGTCGACATCGGCCTGTTCTGCTCGACGCCGATGGTGGCGCTGTCGC
GCAACGTTTCGCGCAAGCACGCCATGGAAATGCTGCTCACCGGCGAGATG
ACATCGGCCGCCGACGCCGCGCGCATCGGGCTGATCAACCGCGTGGTTGC
GGCAGGGACCGAGCTCGACGAGGCACTGAAG
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