mRNA_P-wetherbeei_contig12418.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI) HSP 1 Score: 258 bits (660), Expect = 9.370e-87 Identity = 128/141 (90.78%), Postives = 138/141 (97.87%), Query Frame = 1
Query: 1 VEEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
VEE++TLGPKVAEGE+VFGVAHIFASFNDTFVH+TD+SGRET+ RVTGGMKVKADRDEASPYAAMLAAQDVAARCK+LG+TALHIKMRA GGNK+K PGPGAQSALRALARAGM+IGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct: 11 VEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A176W3G3_MARPO (Uncharacterized protein n=5 Tax=Embryophyta TaxID=3193 RepID=A0A176W3G3_MARPO) HSP 1 Score: 251 bits (640), Expect = 1.050e-83 Identity = 124/140 (88.57%), Postives = 133/140 (95.00%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V EGEHVFGVAHIFASFNDTFVHVTD+SG+ETICRVTGGMKVKADRDE+SPYAAMLAAQDVA RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GMRIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 12 EENVTLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A4Y7JDS0_PAPSO (Uncharacterized protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A4Y7JDS0_PAPSO) HSP 1 Score: 247 bits (631), Expect = 2.390e-82 Identity = 121/140 (86.43%), Postives = 133/140 (95.00%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V +GEHVFGVAHIFASFNDTF+HVTD+SGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDVAARCK+LGVTALHIK+RA GGNK+K PGPGAQSALRALAR+GMR+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 11 EETVTLGPSVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGVTALHIKLRATGGNKTKTPGPGAQSALRALARSGMRVGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: W1PY91_AMBTC (Uncharacterized protein n=8 Tax=Magnoliopsida TaxID=3398 RepID=W1PY91_AMBTC) HSP 1 Score: 246 bits (629), Expect = 4.990e-82 Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V EGEHVFGVAH+FASFNDTFVHVTD+SGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDVA RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GMRIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 12 EENVTLGPTVREGEHVFGVAHVFASFNDTFVHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A835ZK06_9STRA (Ribosomal protein S11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK06_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.400e-82 Identity = 123/140 (87.86%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
E+ TLGPKVAEGE+VFGVAHIFASFNDTFVHVTD+SGRET+CR+TGGMKVKADRDEASPYAAMLAAQDV R K+LG+TALHIKMRA GGNK+K PGPGAQSALRALARAGM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 9 EKAATLGPKVAEGENVFGVAHIFASFNDTFVHVTDLSGRETLCRITGGMKVKADRDEASPYAAMLAAQDVVVRLKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 148
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A835RMY5_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RMY5_VANPL) HSP 1 Score: 247 bits (631), Expect = 9.490e-82 Identity = 121/140 (86.43%), Postives = 133/140 (95.00%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGPKV EGEHVFGVAHIFASFNDTF+HVTD+SGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDVA RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 52 EETVTLGPKVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 191
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A6P4ASX8_ZIZJJ (40S ribosomal protein S14-3 n=8 Tax=Rosales TaxID=3744 RepID=A0A6P4ASX8_ZIZJJ) HSP 1 Score: 245 bits (626), Expect = 1.380e-81 Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE ITLGP V GEHVFGVAHIFASFNDTF+HVTD+SGRETI R+TGGMKVKADRDE+SPYAAMLAAQDVA RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GMRIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 11 EENITLGPAVQPGEHVFGVAHIFASFNDTFIHVTDLSGRETIVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 150
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A1Y1HVR2_KLENI (40S ribosomal protein S14 n=11 Tax=Streptophyta TaxID=35493 RepID=A0A1Y1HVR2_KLENI) HSP 1 Score: 245 bits (626), Expect = 1.430e-81 Identity = 121/140 (86.43%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V EGEHVFGVAHIFASFNDTFVHVTD+SG+ETI R+TGGMKVKADRDE+SPYAAMLAAQD AARCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 12 EETVTLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGKETITRITGGMKVKADRDESSPYAAMLAAQDAAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A0A0K9QEH8_SPIOL (Uncharacterized protein n=7 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K9QEH8_SPIOL) HSP 1 Score: 245 bits (626), Expect = 1.430e-81 Identity = 120/140 (85.71%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V EGEHVFGVAHIFASFNDTF+HVTDVSGRET+ R+TGGMKVKADRDE+SPYAAMLAAQDV+ RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 12 EETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDVSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Match: A9TNC8_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TNC8_PHYPA) HSP 1 Score: 245 bits (626), Expect = 1.430e-81 Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 1
Query: 4 EEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMKVKADRDEASPYAAMLAAQDVAARCKDLGVTALHIKMRAVGGNKSKMPGPGAQSALRALARAGMRIGRIEDVTPIPTDCTRRKGGRRGRRL 423
EE +TLGP V +GEHVFGVAHIFASFNDTFVHVTD+SG+ETI RVTGGMKVKADRDEASPYAAMLAAQDVA RCK+LG+TALHIK+RA GGNK+K PGPGAQSALRALAR+ MRIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct: 12 EENVTLGPSVRDGEHVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSNMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12418.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12418.1.1 >prot_P-wetherbeei_contig12418.1.1 ID=prot_P-wetherbeei_contig12418.1.1|Name=mRNA_P-wetherbeei_contig12418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp VEEKITLGPKVAEGEHVFGVAHIFASFNDTFVHVTDVSGRETICRVTGGMback to top mRNA from alignment at P-wetherbeei_contig12418:583..1275+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12418.1.1 ID=mRNA_P-wetherbeei_contig12418.1.1|Name=mRNA_P-wetherbeei_contig12418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig12418:583..1275+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12418:583..1275+ >mRNA_P-wetherbeei_contig12418.1.1 ID=mRNA_P-wetherbeei_contig12418.1.1|Name=mRNA_P-wetherbeei_contig12418.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig12418:583..1275+ (Phaeothamnion wetherbeei SAG_119_79)back to top |