mRNA_P-wetherbeei_contig54.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A182H9B7_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H9B7_AEDAL) HSP 1 Score: 97.1 bits (240), Expect = 1.010e-19 Identity = 65/166 (39.16%), Postives = 83/166 (50.00%), Query Frame = 1
Query: 169 PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
P P + +A+E E W AA++EE W VP PAG IGC+W+F RK ++RY+ RLVAQGF Q+ G DY FA V+ A+ L D V TAYLN L+EM++MR PPG G D + + K I GLKQA
Sbjct: 398 PEPHTIKEAMESTEKDLWKAAIKEELQAHEENGTWKVVPLPAGR-------KTIGCKWIFKRKEDEKGNVVRYKARLVAQGFTQKYGTDYDEVFAPVVKQVTFKALLSVAHQRKMLIKHID-VKTAYLNGELQEMVFMRPPPGCDFG-DSKLVCHLQKGIYGLKQA 554
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 97.1 bits (240), Expect = 1.090e-19 Identity = 64/157 (40.76%), Postives = 84/157 (53.50%), Query Frame = 1
Query: 175 PSSAADALEGREATEWMAAMQEEWHNVPSPAGHGGTG--GGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
P + ++A E EW AM +E + + G IGCRWV+ KR SD I+RY+ RLVAQGF+Q PG+DY TFA V+ L + + D VV AYLNA L+E ++MR+PPG G V L+ KA+ GLKQA
Sbjct: 15 PRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFD-VVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLR--KALYGLKQA 168
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 96.7 bits (239), Expect = 1.500e-19 Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 172 LPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
+P + +AL G EA EW AM+ E W PA +GCRWVFA+K S+ + RY+ RLVAQGF+QRPG+D T+A V + + + G + +VTAYLN L+ M++M++P G + + + + K++ GLKQ+
Sbjct: 372 IPRNVKEALSGAEANEWKQAMETEYKSLEENKTWKLCELPASR-------TAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILI-ALGVQLDWHMHQMDMVTAYLNGTLDTMIYMKQPEGFIKEGSENLVCDLQKSLYGLKQS 528
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8J4FPZ7_9CHLO (Uncharacterized protein n=20 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FPZ7_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 2.930e-19 Identity = 66/173 (38.15%), Postives = 88/173 (50.87%), Query Frame = 1
Query: 151 AAATGG-PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
AA+TG P PS+ A+A G A EW AM EE W P G ++ CRWV+ KR +D I R++ LVA+G+ QR G+DYG FA L A+ + D V TA+LN LEE LWM++PPG D +A ++ ++I GLKQA
Sbjct: 837 AASTGEIPEPSTYAEATNGPHAEEWKKAMDEEIAAQLANGTWELARPPEGT-------RLLPCRWVYKVKRGADGEIERFKAHLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLD-VSTAFLNGELEEELWMQQPPG-YESKDPNLACRLKRSIYGLKQA 1000
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A4Y9ZNP4_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZNP4_9AGAM) HSP 1 Score: 95.5 bits (236), Expect = 3.410e-19 Identity = 66/171 (38.60%), Postives = 88/171 (51.46%), Query Frame = 1
Query: 154 AATGGPLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
AA G P + +A++G +A W AMQEE W P G IGCRW + KR ILRY+ RLVAQGF+Q PGVDY TF+ + L AI T RG+ D V A+L+ LE +++M +PPG G + VA + +++ GLKQA
Sbjct: 108 AAHGERTPQNFTEAMQGPDAEHWWKAMQEEIELLTKQKTWVIEDLPEGR-------KPIGCRWTYVIKRGPKGEILRYKARLVAQGFSQIPGVDYDDTFSPTVRQESLRAIIHLTAAHGWFRGQDD-VTGAFLHGDLEHIIYMLQPPG-FGDGTNRVA-HLWRSLYGLKQA 268
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A182GZN1_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GZN1_AEDAL) HSP 1 Score: 95.5 bits (236), Expect = 3.830e-19 Identity = 66/166 (39.76%), Postives = 84/166 (50.60%), Query Frame = 1
Query: 169 PLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
P P + +A+ E W AA++EE W VP PAG IGC+W+F RK DE ++RY+ RLVAQGF Q+ G DY FA V+ A+ L D V TAYLN L+EM++MR PPG G D + + K I GLKQA
Sbjct: 786 PEPRTIKEAMGSTEQDLWKAAIKEELQAHEENGTWKVVPLPAGR-------KTIGCKWIFKRKE--DENVVRYKARLVAQGFTQKYGTDYDEVFAPVVKQVTFKALLSVAHQRKMLIKHID-VKTAYLNGELQEMVFMRPPPGCDFG-DSKLVCHLQKGIYGLKQA 940
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A0C2WM40_AMAMK (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WM40_AMAMK) HSP 1 Score: 94.4 bits (233), Expect = 8.110e-19 Identity = 71/195 (36.41%), Postives = 103/195 (52.82%), Query Frame = 1
Query: 112 EYSATTVEVIA-----AAAAATGGPLPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYG--ATFARVMHVGGLNA-ISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVA--LQVLKAIDGLKQA 639
EY+ T++ + A A++ +P++ +A EA +W AM EE W V P G N++GC+WVF +KR + I R++ RLVAQGF+Q+PGVDY TFA VM L ++ + +LR V +AYLN L+E ++MR+PPG FDD ++ K+I GLKQA
Sbjct: 19 EYANLTIDNVVDFIEVALKASSSEDVPNNVEEARGCDEAEKWEGAMGEELEMMKKMGTWELVDLPEGK-------NIVGCKWVFTKKRDEEGRINRFKARLVAQGFSQKPGVDYSNTGTFAPVMRFESLRTHLALAAVNNWELR--QFDVKSAYLNGSLDEEIYMRQPPG----FDDGSGRVCRLKKSIYGLKQA 200
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A8H4R3V9_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4R3V9_9AGAR) HSP 1 Score: 94.0 bits (232), Expect = 1.360e-18 Identity = 64/167 (38.32%), Postives = 85/167 (50.90%), Query Frame = 1
Query: 172 LPSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYG--ATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
LP + +AL G EAT+W AM EE W P G V+GCRWVF +KR +++++ RLV QGF+Q+PGVDY TFA VM L + L+ V AYL+ LEE ++M +PPG G D L L+++ GLKQA
Sbjct: 893 LPRTFEEALAGPEATQWKEAMDEEMGTLEKMGTWRKGMLPVGR-------KVVGCRWVFTKKRDEYGRVVKFKARLVVQGFSQKPGVDYSEDGTFAPVMRFETLRTMLAFAAVD-DLKLRQFDVKGAYLHGHLEEEIFMTQPPGYDDGSGDVCIL--LRSLYGLKQA 1049
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A0B7FGS9_THACB (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=A0A0B7FGS9_THACB) HSP 1 Score: 92.8 bits (229), Expect = 2.990e-18 Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 1
Query: 193 ALEGREATEWMAAMQEEWHNV-------PSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPD----GVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVAL 603
A+ E+++W+AAM+EE+ + P+P GT N+IGCRWVFA+KR + RY+ RLVA+G+ Q+PG D+ TFA V+ + L + S+ + D VV AYLNA L+E L+M + PG D+ + L
Sbjct: 533 AMTSPESSQWIAAMEEEYSQLMRMGTFTPTPRPPTGT----NIIGCRWVFAKKRDEHGNVTRYKARLVAKGYTQKPGQDFDDTFAPVLRLDSLRILC-----SLACYNDWDMRQLDVVGAYLNATLQEELYMEQIPGFSDSTDNVLRL 671
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Match: A0A182G6D5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G6D5_AEDAL) HSP 1 Score: 90.5 bits (223), Expect = 4.620e-18 Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 175 PSSAADALEGREATEWMAAMQEE---------WHNVPSPAGHGGTGGGHNVIGCRWVFARKRASDETILRYRVRLVAQGFAQRPGVDYGATFARVMHVGGLNAISPCTGGSVQLRGEPDGVVTAYLNAPLEEMLWMRRPPGPLGGFDDCVALQVLKAIDGLKQA 639
P+S DA+ E W AM+EE W V PAG + IGC+WVF RK S + R++ RLVAQGF+QRPGVDY A FA V L + G ++ V +AYL+ L+E ++M +P G + + + ++ +++ GLKQA
Sbjct: 96 PTSYEDAVRSSEKMLWKVAMKEEYDSLMQNGTWKLVELPAGR-------DPIGCKWVFKRKEDSVGKVTRFKARLVAQGFSQRPGVDYDAVFAPVASQNTLRVLFTVAGHK-RMNVRHIDVKSAYLHGRLQEDIYMEQPRGFVQPGKEKLVCKLERSLYGLKQA 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig54.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig54.4.1 >prot_P-wetherbeei_contig54.4.1 ID=prot_P-wetherbeei_contig54.4.1|Name=mRNA_P-wetherbeei_contig54.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp AAETAELPALDGVWTELSSPTGVRNLAFPILLASEAQEYSATTVEVIAAAback to top mRNA from alignment at P-wetherbeei_contig54:6325..6963- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig54.4.1 ID=mRNA_P-wetherbeei_contig54.4.1|Name=mRNA_P-wetherbeei_contig54.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig54:6325..6963- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig54:6325..6963- >mRNA_P-wetherbeei_contig54.4.1 ID=mRNA_P-wetherbeei_contig54.4.1|Name=mRNA_P-wetherbeei_contig54.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig54:6325..6963- (Phaeothamnion wetherbeei SAG_119_79)back to top |