mRNA_P-wetherbeei_contig53992.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A1V3Q0T4_9GAMM (Bifunctional diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter sp. C03 TaxID=1945858 RepID=A0A1V3Q0T4_9GAMM) HSP 1 Score: 92.0 bits (227), Expect = 4.340e-19 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 AFCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQ 270
AFC +FG+ E P L AV+ A + TY D ARI+ +++ GEPV EEI + DGRI LRDFVPI DG P GRLW RD+TEQ
Sbjct: 398 AFCTLFGLSETPAELENQPVAVIYACLKPTYEDPEREVARIQQILSRGEPVEGEEIAMRDGRIYLRDFVPIRIDGVPQGRLWQQRDITEQ 487
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A355ELP0_9DELT (Histidine kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A355ELP0_9DELT) HSP 1 Score: 89.0 bits (219), Expect = 5.190e-18 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 4 FCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALR 294
FC F + E+P LAG++A M+ K+ Y D A ARI ++ G+PVR EEI +A G+ CLRDFVPI G +GR W+H D+TE++ + E++R
Sbjct: 230 FCRSFDLHESPADLAGVSAEEMINKIRNAYLDPEKAVARIAQIVAEGKPVRGEEIAMAGGKTCLRDFVPIFVQGELYGRAWFHVDITERKTAEESIR 326
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A1E4HJV6_9GAMM (Diguanylate cyclase n=3 Tax=Rhodanobacter TaxID=75309 RepID=A0A1E4HJV6_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 1.650e-14 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 AFCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTE 267
AFC +FG+ E+P L G+ +A + A++ Y + R+ ++ E RDEE+LLADGR+ LRDF+PI DG G +W RD+TE
Sbjct: 398 AFCALFGLAESPGELEGLPSAALHARISHLYCEPERELERMAGIVARNEESRDEEVLLADGRVLLRDFMPICIDGVAQGCIWQQRDITE 486
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: UPI00069EA678 (PAS domain S-box protein n=1 Tax=Rubrobacter aplysinae TaxID=909625 RepID=UPI00069EA678) HSP 1 Score: 75.9 bits (185), Expect = 2.040e-13 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 79 VVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALRESEARFRVLAEDAPVMIWLTAADGRYEFVNRA 390
V+ AD ARI ++ +G V EE+LLADGR+ RD+VP+ G G +W++RD+T +R+ E LRES+ RFR L + V + + D R N A
Sbjct: 799 VMNLLADPEGFVARIEEILASGRAVTGEEVLLADGRVYERDYVPVYVRGEYRGHMWHYRDLTSHKRAEERLRESQGRFRALFDQTAVGVCVADLDRRLLETNEA 902
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A7X0AU32_9GAMM (Diguanylate cyclase (GGDEF)-like protein/PAS domain S-box-containing protein n=2 Tax=unclassified Rhodanobacter TaxID=2621553 RepID=A0A7X0AU32_9GAMM) HSP 1 Score: 73.9 bits (180), Expect = 9.300e-13 Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 1
Query: 1 AFCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQ 270
AFC ++G E P L ++++ +++ Y D R+ ++ GE VRDEE+L+ DGR LRDF PI DG GR+W RDVT Q
Sbjct: 408 AFCKLYGFEMTPAELENQPSSMIFSRLTDAYKDPDKEFLRLNEILLRGEVVRDEEVLMRDGRTLLRDFTPIYIDGVRCGRIWNQRDVTSQ 497
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A1J5SR30_9ZZZZ (Aerobic respiration control sensor protein ArcB n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5SR30_9ZZZZ) HSP 1 Score: 72.8 bits (177), Expect = 2.400e-12 Identity = 39/106 (36.79%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 4 FCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALRESEARFRVL 321
FCD++ I P+ L GMT+ + + + RI ++ AG+P DEE L +GR+ LRDF+PI DG GR+W HRD+TE + + + E R L
Sbjct: 333 FCDLYSIGRDPEELVGMTSTEFVELLRPCLLNPERHLGRIAELVAAGKPYHDEEYRLPNGRVVLRDFIPIAVDGIQSGRIWAHRDITELRSAEDHRHREERRLAAL 438
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A433IJZ8_9GAMM (Histidine kinase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433IJZ8_9GAMM) HSP 1 Score: 72.0 bits (175), Expect = 4.250e-12 Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 1
Query: 1 AFCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEF-DGRPHGRLWYHRDVTEQQRSREALRESEARFRVLAEDAPVMIWLTAADGR 369
AFC+MFG+ P L G A +AD + R+ ++NAG P R+EE+LLADGR+ LRD+ P+ DG G LW + D+T+ +R+ L +S+ + E+ + T GR
Sbjct: 57 AFCEMFGVPS-PTLLLGNDCAADAECSKHLFADPESFLTRVAELLNAGRPSRNEELLLADGRVLLRDYAPVRAADGALLGHLWLYLDITDNKRTERELAQSQRELESIFENLQDTYYRTDQAGR 179
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A7Y5NUQ5_9DELT (Histidine kinase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NUQ5_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 7.540e-12 Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 1
Query: 1 AFCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALRESEAR--FRVLAEDAPVMIWLTAADGRYEFVNR 387
A C ++ I AP AL G + ++ DS +RI ++ + V +E++L DGR+ RD+VPI D G LW +RDVTE ++ R + R R+ + P ++W + ADG EFVN+
Sbjct: 43 ALCTLWLIPLAPSALVGTDCSKTAQQLAPMVRDSDRWVSRIDELLKDRKAVTGDEVVLNDGRVFERDYVPISVDSVERGHLWVYRDVTESRKHARLERAAAVRDGLRLAIDAIPGLVWSSRADGYVEFVNQ 173
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A7W9SM64_9BACT (PAS domain S-box-containing protein n=1 Tax=Armatimonas rosea TaxID=685828 RepID=A0A7W9SM64_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 1.100e-11 Identity = 36/98 (36.73%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 4 FCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALRE 297
FCD+F + AP+ L G + + +A R+ ++ A EPVR+EE+ LADGRI RD++PI ++ G LW +RD+TE++++ +AL++
Sbjct: 168 FCDLFQVPVAPEQLIGQDCSQSGEQSKELFATPEQFVTRVGEILAAQEPVREEELRLADGRILERDYLPIFYEANYRGHLWVYRDITERKQTEKALQK 265
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Match: A0A6N9NPZ6_9FLAO (PAS domain S-box protein n=1 Tax=Acidiluteibacter ferrifornacis TaxID=2692424 RepID=A0A6N9NPZ6_9FLAO) HSP 1 Score: 70.9 bits (172), Expect = 1.110e-11 Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 4 FCDMFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEEILLADGRICLRDFVPIEFDGRPHGRLWYHRDVTEQQRSREALRESEARFRVLAED 330
FC++F I PD+L G+ + + ++ D RI ++ + E V ++E+LL DGRI RD++PI + R G LW +RDVT Q+ A++ SE ++R + E+
Sbjct: 212 FCNLFAIPAPPDSLIGLDCSSSAEESKVSFIDEEGFVNRINEILESKEKVLNDELLLKDGRIFERDYIPIYVENRYSGHLWNYRDVTIQRNQVNAIKRSEEKYRSIIEN 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53992.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53992.1.1 >prot_P-wetherbeei_contig53992.1.1 ID=prot_P-wetherbeei_contig53992.1.1|Name=mRNA_P-wetherbeei_contig53992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp MFGIEEAPDALAGMTAAVMLAKVVRTYADSGAAAARIRAVINAGEPVRDEback to top mRNA from alignment at P-wetherbeei_contig53992:140..532- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53992.1.1 ID=mRNA_P-wetherbeei_contig53992.1.1|Name=mRNA_P-wetherbeei_contig53992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig53992:140..532- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53992:140..532- >mRNA_P-wetherbeei_contig53992.1.1 ID=mRNA_P-wetherbeei_contig53992.1.1|Name=mRNA_P-wetherbeei_contig53992.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig53992:140..532- (Phaeothamnion wetherbeei SAG_119_79)back to top |