mRNA_P-wetherbeei_contig5392.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: D7G058_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G058_ECTSI) HSP 1 Score: 209 bits (532), Expect = 4.250e-63 Identity = 123/238 (51.68%), Postives = 154/238 (64.71%), Query Frame = 1
Query: 34 AACASPDVI---PLPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLSGLWLQLAASVTAA 738
AA A+P V LP F +AG SGM+AW+FIHP DL+KTRM LL +K +G+ A ++V + + K GV LYAGLSAALA QA YTTLRLGLYDL + +L +G + LR G +SG ASF +CPIEVCLVRMQ DG+LP ++R YRG+F+AL RIAR+EG L +WRG TV+RAMVVSVSQ++TYDQAK S A ++ G L A V +A
Sbjct: 20 AAVANPTVAVAQDLPTYANFVVAGASGMSAWVFIHPADLIKTRMQLLGDSK-------KGATA---VSVGKDLVKNEGVTALYAGLSAALARQASYTTLRLGLYDLLRRLVLDSRTSDMNGV-----QLLLLRILIGAVSGGMASFCSCPIEVCLVRMQADGKLPKDQQRGYRGVFHALYRIARDEGALAYWRGGGTTVLRAMVVSVSQIATYDQAKASLAPYVQGFRQHLVAGVISA 242
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A835Z4J2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J2_9STRA) HSP 1 Score: 195 bits (496), Expect = 4.290e-58 Identity = 115/226 (50.88%), Postives = 138/226 (61.06%), Query Frame = 1
Query: 64 LPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLS-GLWLQLAASVTAA 738
+PM TFA+AG SG++AW+FIHP DL+K RM LL G G S A +I++ GV GLYAGLSAA+ QA YTT RLGLYD+ K + A P R GL +G A+F CPIEVCLVRMQ DG LPPA RR Y +FNAL R+A+EEG LT+WRGA+ TV RAMVVS +Q+ TYDQ K S L G Q A++TAA
Sbjct: 8 VPMAATFAVAGASGISAWMFIHPADLIKVRMQLL----GNSGAKTTASMAF------NEIRRTQGVKGLYAGLSAAITRQAVYTTARLGLYDIIKAAI----------APPGTEVTVLHRLTTGLAAGGIAAFLTCPIEVCLVRMQADGRLPPAERRGYTNVFNALGRVAKEEGVLTYWRGASPTVARAMVVSATQLGTYDQVKTSLLPILGDGAATQTVAALTAA 213
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A835ZCT1_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT1_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.140e-56 Identity = 131/295 (44.41%), Postives = 156/295 (52.88%), Query Frame = 1
Query: 4 RLFTAASALAAACASPDV---IPLPMPVTFAIAGLSGMTAWLFIHPG-----------------------------------------------DLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLSGLWLQLAASVTAA 738
+L AA+ L A A+ V +PLP TFA+AGLSGMTAWL +HPG D++K RM L ++ G SP GP+ VAR + E G LY GLSA L QA YTTLRLGLYDL K L L A +R G LSGAAASF +CP+EVCLVRMQGDG+LP A RRNY+ IF+AL RI REEG T+W GA T+IRAMVVS++Q++TYDQ K L+G L AA V AA
Sbjct: 6 KLAVAAALLLAPTAAAPVAGEVPLPTYATFAVAGLSGMTAWLVVHPGKCLLLRRSADDWLYLHSVMTILSSSLDLKLLSCTLSPHPPAPPPHAGDVIKARMQLEDRSAAASGA----SP--GPLQVARAMVHEEGAMSLYGGLSAGLLRQATYTTLRLGLYDLGKRLALELIELVTGEPARGAAGGAAMRFVVGALSGAAASFLSCPVEVCLVRMQGDGKLPKAARRNYKSIFDALIRIGREEGLTTYWTGAGTTMIRAMVVSITQIATYDQVKELLEGQLAGTALHAAAGVAAA 294
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A4D9CTP4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTP4_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.760e-51 Identity = 107/226 (47.35%), Postives = 139/226 (61.50%), Query Frame = 1
Query: 64 LPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKH--LSGLWLQLAASVTA 735
LP V FA+ SG++ WL +HP D+VK RM L KA G G + A+ I K G AGLY+GLSAA+A Q YTT+RLG +D K AF ++ + T R + + +GA ASF CP+EVCLVRMQ DG+LPP +RR Y+ + +AL R+AREEG LT+WRGA TV+RAMVVS +Q+ TYDQAK +F + G L L +S+TA
Sbjct: 27 LPTSVNFAVGMASGVSGWLIVHPADVVKVRMQLAGKAGG------------GMLTTAQDIIKREGFAGLYSGLSAAIARQMSYTTMRLGFFDEIK------AFLAQRQVQENALT----RSMSAMTAGACASFLACPVEVCLVRMQADGKLPPEQRRGYKHVGDALLRVAREEGVLTYWRGAGPTVMRAMVVSTTQLGTYDQAKVTFKETGLPDGTSLHLISSLTA 230
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A0G4HYE4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HYE4_9ALVE) HSP 1 Score: 171 bits (433), Expect = 1.700e-48 Identity = 100/226 (44.25%), Postives = 138/226 (61.06%), Query Frame = 1
Query: 76 VTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPAL-GPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKH------LSGLWLQLAASVT 732
+T ++GL+G+ W+F+HP D++KTRM Q G+G G+ A G + A +I + GV LYAGLSA + QA YTTLR GLY +F+D++ A T F + GL SGA A+ CP+EV L+RMQ DG LPP RRNY+ +F+ + RIAREEG T WRG+ TV+RAMVV++ Q++TYD+AK + K +GL L A+S+T
Sbjct: 18 LTLTLSGLAGIGGWMFVHPFDVLKTRM--------QLSGEGGGARAYKGTVDAAVKISQREGVLALYAGLSAGVTRQASYTTLRAGLYQIFRDKM----------AGGSKETSFGTKLICGLASGATAATICCPVEVSLIRMQADGRLPPEERRNYKNVFDGILRIAREEGIATCWRGSTPTVVRAMVVNMVQMATYDEAKRTLQKQNAVSSLKAGLPLHFASSLT 225
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: D8LMW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW0_ECTSI) HSP 1 Score: 171 bits (432), Expect = 1.900e-48 Identity = 105/226 (46.46%), Postives = 137/226 (60.62%), Query Frame = 1
Query: 64 LPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLS-GLWLQLAASVTAA 738
+P V F +AG SG++AW+F+HP D++K RM L G+ A P+A A+ + E+G+ G+YAGLSAA+ QA YTTLR+GLYD +D + + V R A GL +G ASF CPIEVC+VRMQ D LP A R Y+ I +AL RIA+EEG T+WRGA TV RAMVVS++Q+ TYDQAK L L LA+++TAA
Sbjct: 13 IPTAVRFGVAGASGISAWMFVHPMDVLKVRMQL-------------GAGAGHPMAAAKLVYGESGLRGMYAGLSAAVTRQAVYTTLRVGLYDWIRDHAVHKFVKQEDINVLH-------RAAVGLTAGGIASFMCCPIEVCMVRMQSDARLPQADRLGYKHIGDALFRIAKEEGVRTYWRGATPTVSRAMVVSMTQLGTYDQAKTVLLPILGDNKGLHLASALTAA 218
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A7S1JD16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JD16_9EUGL) HSP 1 Score: 169 bits (427), Expect = 8.120e-48 Identity = 102/217 (47.00%), Postives = 130/217 (59.91%), Query Frame = 1
Query: 64 LPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLSGLWLQ 714
+P V FA G G+T W+F+HP D++KTRM LL G G G +++A I K G GLY+GLSAA+ Q YTT RLGLY +D ++ ++ G R AG+ +GA AS PIEVCLVRMQ DG LP A +RNY+ IF+AL R+AREEG LT+WRG TV+RA+VVSV+QV+ YDQ K S L+ W Q
Sbjct: 4 VPAWVHFATGGAGGITGWMFVHPMDVLKTRMQLL----------GSGGKNTGVVSLASGILKNEGAKGLYSGLSAAMMRQVTYTTARLGLYGSLRDLIVKPGQQATLGQ----------RVLAGVGAGAIASSVCNPIEVCLVRMQSDGRLPKAEQRNYKHIFDALGRVAREEGILTYWRGCTPTVVRAIVVSVTQVAGYDQIKASL---LNSGWFQ 197
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A7M7NEJ3_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NEJ3_STRPU) HSP 1 Score: 152 bits (383), Expect = 4.030e-41 Identity = 91/206 (44.17%), Postives = 116/206 (56.31%), Query Frame = 1
Query: 61 PLPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPA-LGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAK 675
P+P + F G +GM A +F+ P DLVK RM Q G+G G+ A + + I KE G GLY GLSA L QA YTT RLG+Y D + + P P F ++ G++SGA +F P E+ L+RM DG LP A RR Y +FNALARI REEG LT WRG TV RAMVV+ +Q+++Y QAK
Sbjct: 9 PIPNAIKFLFGGTAGMAATVFVQPLDLVKNRM--------QMSGEGGGAKAHKTSVHAIKSIIKEEGALGLYNGLSAGLLRQATYTTTRLGIYTTLFDMAIG------ADGKPPP---FLMKAGIGMISGAIGAFVGTPAEISLIRMTSDGRLPVAERRGYTSVFNALARITREEGLLTLWRGCGPTVARAMVVNAAQLASYSQAK 197
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A7I0ZED8_DANPL (mitochondrial 2-oxoglutarate/malate carrier protein-like n=3 Tax=Danaus TaxID=13036 RepID=A0A7I0ZED8_DANPL) HSP 1 Score: 150 bits (380), Expect = 8.360e-41 Identity = 95/224 (42.41%), Postives = 127/224 (56.70%), Query Frame = 1
Query: 61 PLPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAKNSFAKHLS-GLWLQLAASV 729
P+P + F GLSGM + P DLVKTRM L RG+P++ +A I K+ G+ G Y GLSAAL QA YTT RLG Y+ + + + + VP F ++ G+++G +F P EV L+RM DG LPP +RRNY+ +FNALARI+REEGP +RGA TV RAMVV+ +Q+STY QA+ L G+ L AS+
Sbjct: 12 PMPGWLNFVFGGLSGMMGICVVQPADLVKTRMQLAGP---------RGNPSV--LATVSNILKKEGITGFYTGLSAALFRQATYTTGRLGCYNGISN------YYTTAYGVPS----FPVKLVIGMIAGGIGAFIGTPAEVALIRMTADGRLPPEQRRNYKNVFNALARISREEGPAMMFRGATATVTRAMVVNAAQLSTYAQAREMLLPQLGDGIVLHFIASL 214
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Match: A0A444TU29_ARMVU (Mitochondrial 2-oxoglutarate/malate carrier protein n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TU29_ARMVU) HSP 1 Score: 149 bits (375), Expect = 9.000e-41 Identity = 91/204 (44.61%), Postives = 118/204 (57.84%), Query Frame = 1
Query: 64 LPMPVTFAIAGLSGMTAWLFIHPGDLVKTRMILLSKAKGQKGGDGRGSPALGPIAVARQIKKEAGVAGLYAGLSAALALQACYTTLRLGLYDLFKDQLLALAFRSRSGAVPDPATMFWLRQAAGLLSGAAASFANCPIEVCLVRMQGDGELPPARRRNYRGIFNALARIAREEGPLTFWRGAAVTVIRAMVVSVSQVSTYDQAK 675
+P V FA GL+GM A F+ P DLVK RM + +K+K K V + + K G++G+Y GLSA L QA YTT RLG+Y F SG +P F+L+ G+ +G SF P EV L+RM DG LPPA RRNY+ +F+AL RI REEG LT WRGA T+ RAMVV+ +Q+++Y QAK
Sbjct: 9 IPNLVKFAFGGLAGMGATCFVQPLDLVKNRMQV-AKSKEHKTS----------FHVIKHVIKTEGISGMYTGLSAGLLRQATYTTTRLGIYTWL--------FEMASGPSGEPPN-FFLKAGMGMAAGVVGSFVGTPAEVSLIRMTSDGRLPPAERRNYKNVFDALFRITREEGVLTLWRGAIPTMGRAMVVNAAQLASYSQAK 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5392.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5392.1.1 >prot_P-wetherbeei_contig5392.1.1 ID=prot_P-wetherbeei_contig5392.1.1|Name=mRNA_P-wetherbeei_contig5392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp MRLFTAASALAAACASPDVIPLPMPVTFAIAGLSGMTAWLFIHPGDLVKTback to top mRNA from alignment at P-wetherbeei_contig5392:2473..3871+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5392.1.1 ID=mRNA_P-wetherbeei_contig5392.1.1|Name=mRNA_P-wetherbeei_contig5392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1399bp|location=Sequence derived from alignment at P-wetherbeei_contig5392:2473..3871+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5392:2473..3871+ >mRNA_P-wetherbeei_contig5392.1.1 ID=mRNA_P-wetherbeei_contig5392.1.1|Name=mRNA_P-wetherbeei_contig5392.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig5392:2473..3871+ (Phaeothamnion wetherbeei SAG_119_79)back to top |