prot_P-wetherbeei_contig12410.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12410.1.1
Unique Nameprot_P-wetherbeei_contig12410.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length66
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig12410.1.1 vs. uniprot
Match: D8LBT7_ECTSI (RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBT7_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.950e-11
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:    1 LYNYLNVPFLELKRQTLLRQAQRAGEELAAAARELDATLADHDYRKYLSHLQATRANPAAGEEA 64
            LY YLNVPFLELKR++LL+QAQ A E L    +EL   +  H Y  Y+ HL+A+  +P AG  A
Sbjct:  360 LYTYLNVPFLELKRKSLLQQAQMASERLEKEYQELAGFIGGHSYGNYMQHLRASDVDPTAGRSA 423
[Close]
BLAST of mRNA_P-wetherbeei_contig12410.1.1 vs. uniprot
Match: A0A6P8ZJA9_THRPL (rab-like protein 6 n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZJA9_THRPL)

HSP 1 Score: 48.5 bits (114), Expect = 7.110e-5
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:    1 LYNYLNVPFLELKRQTLLRQAQRAGEELAAAARELDATLA--DHDYRKYLSHL-----QATRANPAAGEEA 64
            L+ +LN+PFL+L+R+TLL Q +  G E  A   ELDA  A  D DY ++L +L     Q   +  +AG +A
Sbjct:  228 LHKFLNLPFLQLQRETLLAQLETNGNETTATVAELDAFQAGPDADYNQFLENLVNKRRQVAESTSSAGTQA 298
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12410.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBT7_ECTSI2.950e-1151.56RBEL1, Ras superfamily GTPase n=2 Tax=Ectocarpus T... [more]
A0A6P8ZJA9_THRPL7.110e-540.85rab-like protein 6 n=1 Tax=Thrips palmi TaxID=1610... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12410contigP-wetherbeei_contig12410:1798..1995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12410.1.1mRNA_P-wetherbeei_contig12410.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12410 1798..1995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12410.1.1 ID=prot_P-wetherbeei_contig12410.1.1|Name=mRNA_P-wetherbeei_contig12410.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
LYNYLNVPFLELKRQTLLRQAQRAGEELAAAARELDATLADHDYRKYLSH
LQATRANPAAGEEATL
back to top