mRNA_P-wetherbeei_contig53834.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A7C4TSA6_9HYPH (LYZ2 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TSA6_9HYPH) HSP 1 Score: 97.8 bits (242), Expect = 5.090e-21 Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 1
Query: 10 DYSRQAIERARDEGDGSRSSLG--AKAIAAAPAARAEPSKVAAGPAFKVLNEXXXXXXXXXXXXAAMAGAKPPAGKGASAVQATTVAASPKPPAVAQPQAPQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
D +RQA+ERAR EG+ +RS LG A +A PA + S + A VL + +GA+ PA + +A T AA +P A+ P+AP A KCRV+TASYGG K+VIIR+ AD N+TVLDVNEG EAREVEAY+AAYAKGGQ
Sbjct: 249 DLARQAVERARREGETARSGLGFNPSAASAPPAEQHTLSSLLAA----VLPK---------------SGAEEPAVQPPAASVQTVSAAGARPAAL--PKAPP---APKCRVWTASYGGLKSVIIRSVADQQVNYTVLDVNEGAEAREVEAYVAAYAKGGQ 384
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A7Y4USJ8_HYPSQ (Glucosaminidase domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4USJ8_HYPSQ) HSP 1 Score: 94.7 bits (234), Expect = 7.890e-20 Identity = 66/158 (41.77%), Postives = 89/158 (56.33%), Query Frame = 1
Query: 10 DYSRQAIERARDEGDGSRSSLGAKAIAA-APAARAEPSKVAAGPAFKVLNEXXXXXXXXXXXXAAMAGAKPPAGKGASAVQATTVAASPKPPAVAQPQAPQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGG 480
+ +++A + AR G RSSLGA +AA +P P+ AA P+ K+LN P A + + VQ + A K + P A + KC+V+TASYGG +AVII+ASAD+ N+TVLDVNEG E RE +AYI+AYAKGG
Sbjct: 258 ELAKKAADEARANGSYVRSSLGAGMLAAMSPPEATAPAAPAAQPSVKILNAPKVEPLAEA----------PAASEPQAKVQTAALGAGTKSVTIEAPSATAAANTSKCKVWTASYGGNRAVIIKASADAQDNYTVLDVNEGTEQREADAYISAYAKGG 405
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A2P5KXC2_HYPSQ (LYZ2 domain-containing protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2P5KXC2_HYPSQ) HSP 1 Score: 94.4 bits (233), Expect = 1.120e-19 Identity = 77/182 (42.31%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 1 SSNDYSRQAIERARDEGDGSRSSLGAKAIAAAPAARAEPSKVAAGPAFKVLNEXXXXXXXXXXXXAAMAGA--------------------KPPAGKGASA-VQATTVAASPKPPAVAQPQAPQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
S + +RQA+ AR G+GSRS LGA +AAA A+P PA +LN A + + K PA K ++ V A+ KPPA A PQP CRV+ ASYGG KAVII+AS+ TN+TVLDVNEG EARE EA+IAAYA+GGQ
Sbjct: 240 SGTELARQAVSEARASGEGSRSGLGAAGLAAA----AKPQ-----PAITILNAPKEAGETEKSDKADIGASAIEPLAQTNKPARDTKPAVDKDPAAKSKGKDTKSAAVPANGKPPATAA-VTPQPGGPTGCRVWQASYGGAKAVIIKASSGPETNYTVLDVNEGAEAREAEAFIAAYARGGQ 411
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A849TYS2_9HYPH (Glucosaminidase domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TYS2_9HYPH) HSP 1 Score: 92.0 bits (227), Expect = 7.070e-19 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 280 PAVAQPQAPQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGG 480
P V +A P+ AGKCRVFTASYGGQKAVI+R+ D +FTVLDVNEGQE RE +A+I+AYAKGG
Sbjct: 331 PQVPAAEAATPAPAGKCRVFTASYGGQKAVIVRSLVDKIVSFTVLDVNEGQEKREADAFISAYAKGG 397
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: UPI001FDA15D2 (glucosaminidase domain-containing protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI001FDA15D2) HSP 1 Score: 87.0 bits (214), Expect = 4.080e-17 Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 1
Query: 301 APQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
AP + +GKCRV+TASYGG KA+II+A+ D TN+TVLDVN+G E RE +AYI AYAKGGQ
Sbjct: 321 APSAAASGKCRVWTASYGGSKAIIIKATQDKTTNYTVLDVNDGSEKREADAYINAYAKGGQ 381
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A2W4TTN9_9PROT (LYZ2 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TTN9_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 5.580e-17 Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 307 QPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
+P+ KCRV+TASYGGQKA+II+A D F N+TVLDVNEG E RE EA+IAAYAKGG+
Sbjct: 322 KPAGEQKCRVWTASYGGQKAIIIKAEDDGFINYTVLDVNEGSEKRETEAFIAAYAKGGE 380
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: A0A2S5MDF7_HYPSQ (LYZ2 domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MDF7_HYPSQ) HSP 1 Score: 85.9 bits (211), Expect = 1.260e-16 Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 301 APQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
AP+ KCRV+TASYGG +A+IIRA AD N+TVLDVNEG E RE EAYIAAYAKGG+
Sbjct: 358 APKVEVGPKCRVWTASYGGSRAIIIRAKADQLDNYTVLDVNEGAEKREAEAYIAAYAKGGE 418
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: UPI000930B519 (glucosaminidase domain-containing protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000930B519) HSP 1 Score: 84.7 bits (208), Expect = 3.220e-16 Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 313 SQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
+++ KC+VFTASYGGQ+AVII+A+ D TN+TVLDV E E RE+EAYIAAYAKGG+
Sbjct: 361 AKSSKCKVFTASYGGQRAVIIKANGDGQTNYTVLDVTEANEKREIEAYIAAYAKGGE 417
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: UPI00093092DA (glucosaminidase domain-containing protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093092DA) HSP 1 Score: 84.3 bits (207), Expect = 4.650e-16 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 322 GKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGGQ 483
GKCRV+TASYGG KA+II+A AD N+TVLDVNEG E RE +AYI AYAKGGQ
Sbjct: 382 GKCRVWTASYGGSKAIIIKAMADKTVNYTVLDVNEGAEKREADAYINAYAKGGQ 435
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Match: V5SCD6_9HYPH (LYZ2 domain-containing protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SCD6_9HYPH) HSP 1 Score: 83.2 bits (204), Expect = 1.010e-15 Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 292 QPQAPQPSQAGKCRVFTASYGGQKAVIIRASADSFTNFTVLDVNEGQEAREVEAYIAAYAKGG 480
Q AP G CRV+TASYGG KA+II+A D+ TN+TVLDVNEG E RE +AYI AYAKGG
Sbjct: 324 QKDAPPAKAKGSCRVWTASYGGSKAIIIKAVQDATTNYTVLDVNEGAEKREADAYINAYAKGG 386 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53834.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53834.2.1 >prot_P-wetherbeei_contig53834.2.1 ID=prot_P-wetherbeei_contig53834.2.1|Name=mRNA_P-wetherbeei_contig53834.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp SSNDYSRQAIERARDEGDGSRSSLGAKAIAAAPAARAEPSKVAAGPAFKVback to top mRNA from alignment at P-wetherbeei_contig53834:53..535+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53834.2.1 ID=mRNA_P-wetherbeei_contig53834.2.1|Name=mRNA_P-wetherbeei_contig53834.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig53834:53..535+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53834:53..535+ >mRNA_P-wetherbeei_contig53834.2.1 ID=mRNA_P-wetherbeei_contig53834.2.1|Name=mRNA_P-wetherbeei_contig53834.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig53834:53..535+ (Phaeothamnion wetherbeei SAG_119_79)back to top |