mRNA_P-wetherbeei_contig1241.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1241.1.1
Unique NamemRNA_P-wetherbeei_contig1241.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A6H5KKI6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI6_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 6.050e-23
Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPE-SAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            ILEVG+GG P +G F N+++Y  GQ ++G+DP +  E S AL  A  +A   G+ L  V G AE LPF  GSFDA V+TLV CSV DP  AL E++RVLRP G
Sbjct:  135 ILEVGVGGNPKVGGFNNLEFYRRGQRIIGVDPTLSGEPSQALERATEKAQKLGLTLRGVGGIAEELPFETGSFDAVVSTLVFCSVRDPAAALREVSRVLRPGG 237          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A8G1BZN5_9BACI (Class I SAM-dependent methyltransferase n=1 Tax=Hydrogenibacillus sp. N12 TaxID=2866627 RepID=A0A8G1BZN5_9BACI)

HSP 1 Score: 91.7 bits (226), Expect = 2.430e-19
Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LE+G+G         N+ +Y PG    GI+P      A  R+A+RR   RG+A + +  +AEALPFADG FDA V+TLVLCSV DPR+ALAEI RVL+P G
Sbjct:   35 VLEIGVG------TGRNLPFYGPGVRWTGIEP----NPAMRRQAERRLRERGLAGALIAASAEALPFADGRFDAVVSTLVLCSVQDPRKALAEIRRVLKPGG 126          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A835Z8C0_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.040e-19
Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 3
Query:  366 VGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESA--------------ALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +GIGG P LG F N++YY  G  + G+DPA+   +A              A+ +A  +AA  G+ L+AV G AE LP A  S DA V+TLV CSV DP QA++E+ARVLRP G
Sbjct:   77 IGIGGNPTLGGFTNLEYYPRGTVLSGVDPALEDGAAGGIVRAAQCASAALAVTDAAVKAARLGIDLTAVGGRAEQLPIATASCDAVVSTLVFCSVQDPAQAMSEVARVLRPGG 189          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A7C2C385_9CHLR (Class I SAM-dependent methyltransferase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7C2C385_9CHLR)

HSP 1 Score: 82.0 bits (201), Expect = 1.850e-15
Identity = 51/102 (50.00%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LEVG+G        AN  YY  G +VV +DP    +   L  A++RA   G     +   AEALPFADGSFD  VATLV CSV DP +ALAE+ RVLRP G
Sbjct:   65 VLEVGVG------TGANFPYYPGGLSVVAVDP----DPFMLARARKRAGRLGRDPDFIRAAAEALPFADGSFDTVVATLVFCSVLDPDRALAEVRRVLRPGG 156          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A813A8F3_SYMMI (METTL7A protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A813A8F3_SYMMI)

HSP 1 Score: 83.2 bits (204), Expect = 2.180e-15
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  348 PSSILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            P  +LEVG+G +      +N+  Y PG ++VG+DP V   +   ++       RG+   AV G AEALPFAD SFDA VA+LVLCSV +P  AL EIARVL+P G
Sbjct:  129 PLRVLEVGVGVETWA---SNLPLYPPGVSLVGLDPEVSAYATWPKKP------RGLDFEAVRGWAEALPFADNSFDAVVASLVLCSVREPDTALREIARVLKPGG 224          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A1Q9EM75_SYMMI (Methyltransferase-like protein 7A n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EM75_SYMMI)

HSP 1 Score: 83.2 bits (204), Expect = 8.140e-15
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  348 PSSILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            P  +LEVG+G +      +N+  Y PG ++VG+DP V   +   ++       RG+   AV G AEALPFAD SFDA VA+LVLCSV +P  AL EIARVL+P G
Sbjct:  129 PLRVLEVGVGVETWA---SNLPLYPPGVSLVGLDPEVSAYATWPKKP------RGLDFEAVRGWAEALPFADNSFDAVVASLVLCSVREPDTALREIARVLKPGG 224          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: UPI001915BF6B (class I SAM-dependent methyltransferase n=1 Tax=Dictyobacter formicarum TaxID=2778368 RepID=UPI001915BF6B)

HSP 1 Score: 79.7 bits (195), Expect = 1.230e-14
Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LEVG G            YYSP Q V  ++ AV P++A LR A  R A+  V +S V   AEALPFAD +FD+AVATLV CSV+ P+QA+ E+ RVL+P G
Sbjct:   50 VLEVGAGSGRTF------PYYSPEQ-VTRVE-AVEPDAAMLRSAHERKASARVPISFVQARAEALPFADTTFDSAVATLVFCSVEGPQQAMHELLRVLKPGG 143          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A7C2ZF05_9CHLR (SAM-dependent methyltransferase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7C2ZF05_9CHLR)

HSP 1 Score: 79.7 bits (195), Expect = 1.470e-14
Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LEVG+G        AN  +Y  G +VV +DP +      LR A+RRA + G   + +   AEALPF D +FD  VATLV CSV D  ++LAE+ RVLRPDG
Sbjct:   68 VLEVGVG------TGANFGHYPEGASVVAVDPDIFM----LRRARRRARSLGRDAALILAAAEALPFPDQTFDTVVATLVFCSVADVSRSLAEVRRVLRPDG 159          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: A0A3L7WRC5_9CHLR (Class I SAM-dependent methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7WRC5_9CHLR)

HSP 1 Score: 78.6 bits (192), Expect = 1.630e-14
Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LE+G+G        AN+ YY    +V  I+P     + A R  Q  A   G+ +      AE+LP+AD SFDA V++LV CSV DPRQAL EI RVLRP G
Sbjct:   24 VLEIGVG------TGANLPYYRAAASVSAIEPDADRAAEAHRAGQAAAQRLGIPVRVDVAPAESLPYADASFDAVVSSLVFCSVTDPRQALGEIGRVLRPGG 119          
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Match: UPI00040226AA (class I SAM-dependent methyltransferase n=1 Tax=Hamadaea tsunoensis TaxID=53368 RepID=UPI00040226AA)

HSP 1 Score: 79.3 bits (194), Expect = 1.720e-14
Identity = 50/102 (49.02%), Postives = 62/102 (60.78%), Query Frame = 3
Query:  357 ILEVGIGGQPALGAFANMDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPFADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG 662
            +LEV      A+G   ++ +Y PG  V GID  + PE   L  AQR +A  G+      G AEALPF D SFD+ V  L LCS+ DPRQA+AE+ RVLRPDG
Sbjct:   54 VLEV------AVGTGRDLPFYPPGVRVTGID--LSPEM--LLIAQRLSAELGIDADLREGDAEALPFPDASFDSVVCVLALCSIPDPRQAIAEMVRVLRPDG 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1241.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKI6_9PHAE6.050e-2353.40Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A8G1BZN5_9BACI2.430e-1950.98Class I SAM-dependent methyltransferase n=1 Tax=Hy... [more]
A0A835Z8C0_9STRA3.040e-1946.90Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7C2C385_9CHLR1.850e-1550.00Class I SAM-dependent methyltransferase n=1 Tax=De... [more]
A0A813A8F3_SYMMI2.180e-1548.57METTL7A protein n=4 Tax=Symbiodinium TaxID=2949 Re... [more]
A0A1Q9EM75_SYMMI8.140e-1548.57Methyltransferase-like protein 7A n=1 Tax=Symbiodi... [more]
UPI001915BF6B1.230e-1450.00class I SAM-dependent methyltransferase n=1 Tax=Di... [more]
A0A7C2ZF05_9CHLR1.470e-1447.06SAM-dependent methyltransferase n=1 Tax=Dehalococc... [more]
A0A3L7WRC5_9CHLR1.630e-1445.10Class I SAM-dependent methyltransferase n=1 Tax=Ch... [more]
UPI00040226AA1.720e-1449.02class I SAM-dependent methyltransferase n=1 Tax=Ha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1241contigP-wetherbeei_contig1241:226..1070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121946.AUAX01000033_gene5689
Preferred namepmtA
PFAMsMethyltransf_11
Model size662
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.02e-15
EggNOG OGsCOG0500@1|root,COG2226@2|Bacteria,2H9G5@201174|Actinobacteria,4DD8E@85008|Micromonosporales
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-19_002680.1
DescriptionubiE/COQ5 methyltransferase family
Cds size255
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185948.2225084-CDS-P-wetherbeei_contig1241:225..2521683185948.2225084-CDS-P-wetherbeei_contig1241:225..252Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1241 226..252 -
1683185948.233485-CDS-P-wetherbeei_contig1241:435..6631683185948.233485-CDS-P-wetherbeei_contig1241:435..663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1241 436..663 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185948.242096-UTR-P-wetherbeei_contig1241:663..10701683185948.242096-UTR-P-wetherbeei_contig1241:663..1070Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1241 664..1070 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1241.1.1prot_P-wetherbeei_contig1241.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1241 226..663 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1241.1.1

>prot_P-wetherbeei_contig1241.1.1 ID=prot_P-wetherbeei_contig1241.1.1|Name=mRNA_P-wetherbeei_contig1241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp
MDYYSPGQTVVGIDPAVVPESAALREAQRRAAARGVALSAVTGTAEALPF
ADGSFDAAVATLVLCSVDDPRQALAEIARVLRPDG
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mRNA from alignment at P-wetherbeei_contig1241:226..1070-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1241.1.1 ID=mRNA_P-wetherbeei_contig1241.1.1|Name=mRNA_P-wetherbeei_contig1241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=845bp|location=Sequence derived from alignment at P-wetherbeei_contig1241:226..1070- (Phaeothamnion wetherbeei SAG_119_79)
GTTATTTCTTGGCTTTTGTTGGCTGCTCCTTGTTTTGAACCGGTTTTACT TTTGTTTGGTGTCTGATGGCTGAACGCTGACTTTTGGTGCTCTCAGTTGT GACGATTTTCGTCTCTTTCTTAGGGGCGGCTTGTTCTCATTTCGGCCTGG ATCAGTCTCTAAATCTGCCTTTTAAAGAATCAATTTCTTTAGCGTAAATG TCTGCGTTGCAGTCAGTTTGTTAGGGCAATCTCTTTTTCCAACCATGCAT CCTGCGCTTCTCTTTAAAAGTCAGTATTGTCTCTTTTCCCTGTTCTCGTT TTCGTCCCTCATCGCGATTTGCGTCTTTTTCGCAAAAATATACCCACCCC AGCTCCATTCTGGAAGTTGGCATCGGTGGCCAGCCCGCCCTGGGCGCATT TGCAAATATGGACTACTACAGCCCAGGCCAGACGGTTGTGGGAATCGATC CTGCCGTTGTGCCGGAATCGGCGGCGCTGCGGGAGGCGCAGCGGCGGGCG GCGGCGCGGGGAGTGGCACTTTCGGCGGTGACTGGCACAGCCGAGGCGCT GCCGTTTGCCGACGGTTCGTTCGACGCCGCCGTCGCGACGCTGGTGTTGT GCTCCGTGGACGATCCGCGACAGGCGCTGGCGGAGGTGCGTTTGGGGGGA AGGGGGGAGGGAAGATGCAACTTACGATGCCCCGTGAGGTTTTTAGGTGG CTTTCACCCCGTGGCGGATCATGTTCCTTCCTGTTTTTAAGACAGCATGT CTCAGCAAATTTCCTGCATTGGTTTCACTTCTCCTGAAGTGTCGAACGGC CGCCTTCTCGGGCTGCAGATCGCACGGGTGCTGCGACCCGACGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1241:226..1070-

>mRNA_P-wetherbeei_contig1241.1.1 ID=mRNA_P-wetherbeei_contig1241.1.1|Name=mRNA_P-wetherbeei_contig1241.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig1241:226..1070- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTACTACAGCCCAGGCCAGACGGTTGTGGGAATCGATCCTGCCGT
TGTGCCGGAATCGGCGGCGCTGCGGGAGGCGCAGCGGCGGGCGGCGGCGC
GGGGAGTGGCACTTTCGGCGGTGACTGGCACAGCCGAGGCGCTGCCGTTT
GCCGACGGTTCGTTCGACGCCGCCGTCGCGACGCTGGTGTTGTGCTCCGT
GGACGATCCGCGACAGGCGCTGGCGGAGATCGCACGGGTGCTGCGACCCG
ACGGC
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