mRNA_P-wetherbeei_contig5380.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: D7G9E1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E1_ECTSI) HSP 1 Score: 167 bits (422), Expect = 3.080e-43 Identity = 123/339 (36.28%), Postives = 160/339 (47.20%), Query Frame = 1
Query: 1 HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVP--VLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGA-KESL---------RVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGLAWASAAATTATADTV--FAILTEELELSGQFITRYPGHESLWCYRRFVCQSWLATLLHDAAGRAAW--------------RSEREDAGWPAWLEPLRLRLAGLLGVYTVSDHAAAGDGGSSSSSDGDXSSNDSGGTSYPGADSGTDGDALVGG-LMMLLAGEAAFAVGCAVDGDSWDFDKQRRHALTHLCFLT 930
H+KSPNAW+HRRWCW + A D+ L Q EL +C VAELYPKNYYAW+QR WVV + + A+ A +E L LE E V+ WL+ HVSDHSALNHRKN+ +++ AA + +D + ++ +E + + + YPGHESLWCYRRFVCQ+ L T AG AA + R W AW R G D AAA + X + + T + A+ G GG L L EA FA+ CA D +W FD+QRRHAL +L FL+
Sbjct: 193 HAKSPNAWAHRRWCWRN----------------NERFRARHADITWHPLDEQEELKVCQRVAELYPKNYYAWTQRSWVVLRAVGGARADASAGQEGLPGEDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNV--------FSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQARLVTAPSSVAGPAAXXXXXXXXXXXXXSDKDRRGSYDWEAWG---RAVTEWHDGCVREDDRAAAAEDXXXXXXXXXXXTTATEETDFEEAEGALPGAPSGGGPLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLS 504
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A6H5JXA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA5_9PHAE) HSP 1 Score: 166 bits (421), Expect = 3.700e-43 Identity = 127/347 (36.60%), Postives = 166/347 (47.84%), Query Frame = 1
Query: 1 HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGA-------KESLRVVSA---LEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGLAWASAAATTATADTV--FAILTEELELSGQFITRYPGHESLWCYRRFVCQSWLATLLHDAAGRAA--------------WRSEREDAGWPAWLEPLRLRLAGLLGVYTVSDHAAAGDGGSSSSSDGDXSSNDSGGT----------SYPGADSGTDGDALVGGLMMLLAG-EAAFAVGCAVDGDSWDFDKQRRHALTHLCFLT 930
H+KSPNAW+HRRWCW A + +T +D+ Q EL +C VAELYPKNYYAW+QR WVV + + A+ GA K++ +A LE E V+ WL+ HVSDHSALNHRKN+ +++ AA + +D + ++ +E + + + YPGHESLWCYRRFVCQ L T G A R W AW R G D AAA + S D + D+ T + PGA SG GGL+ G EA FA+ CA D +W FD+QRRHAL +L FL+
Sbjct: 181 HAKSPNAWAHRRWCWRNNERFRARHAGSTWHQLDV--------------QEELNVCQRVAELYPKNYYAWTQRSWVVLRAVGGARAEAGAGQEGSPGKDTPTAPAAAELLEREIEFVDRWLTSHVSDHSALNHRKNV--------FSALAAMSPASDEMARLGLVDKERSANSKLLRDYPGHESLWCYRRFVCQVRLVTAPSSVTGPTAAXXXXXXXXXXXXXXXXHRGLYDWEAWG---RAVTEWNDGCVREDDKAAAVE---DSDEDLEQEHEDTTATEEADFEEAEGALPGAPSG-------GGLLATFLGQEARFALKCATDKGAWQFDRQRRHALAYLAFLS 492
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A8B9MNL5_9AVES (Protein prenyltransferase alpha subunit repeat containing 1 n=1 Tax=Accipiter nisus TaxID=211598 RepID=A0A8B9MNL5_9AVES) HSP 1 Score: 94.0 bits (232), Expect = 3.390e-18 Identity = 68/205 (33.17%), Postives = 92/205 (44.88%), Query Frame = 1
Query: 7 KSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGL---------------------------AWASAAATTATADTVFAILTEELELSGQFITRYPGHESLWCYRRFV 540
KSP W HRRW Q + + S T ++ A P + +Q E+ +C+ A YP NY AWS RIWV+ QHL + V L +E + W+S HVSDHS ++R+ LL+ G A A AA + + L EELEL + I YPGHE+LWC+RR+V
Sbjct: 60 KSPETWIHRRWVLQQLIQENSLPSLVTKGNLGAA----PVERIHRLVQEEMNVCSEAAGRYPSNYNAWSHRIWVL-QHLGKL-----------TVKVLLDELSSTKYWVSMHVSDHSGFHYRQFLLKSLIGRTVTDNNVLVQNQIINEQSPSLQKEEESAGAEAACAEEQSVDLPRHLEEELELCAELIDSYPGHETLWCHRRYV 248
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: UPI001B7DBCCF (protein prenyltransferase alpha subunit repeat-containing protein 1-like n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7DBCCF) HSP 1 Score: 92.0 bits (227), Expect = 2.410e-17 Identity = 72/205 (35.12%), Postives = 100/205 (48.78%), Query Frame = 1
Query: 7 KSPNAWSHRRWCWTQALSATAATSAATTSD-VDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFG----LAWASAAATTATADTVFAILT------------------EELELSGQFITRYPGHESLWCYRRFVCQSW 552
KSP W HRRW + ++ A S VD+ A T P+L Q E+ C+ A YP NY AWS RIWV+ Q+L AKE+ +V +E ++ W+S HVSDHS ++R+ L+ G + +A+A +T++ A L EELEL I YPGHE+LWC+RR+V W
Sbjct: 112 KSPETWIHRRWVLQSLIQGCCSSKACKESGAVDMMAAQTERLQPIL--QEEMKACSEAAGRYPSNYNAWSHRIWVM-QNL--------AKENKKV---FLDELSSMKYWVSVHVSDHSGFHYRQFFLKSLVGDPSHVLDKTASALQSTSNEHCASLPKEEASAEIQRTVVPDLFDEELELCTDLIKSYPGHETLWCHRRYVFFLW 302
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A6A7GFL8_9CRUS (Protein prenyltransferase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GFL8_9CRUS) HSP 1 Score: 90.5 bits (223), Expect = 1.080e-16 Identity = 69/208 (33.17%), Postives = 88/208 (42.31%), Query Frame = 1
Query: 1 HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLS--LQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLL-------RLTFGLAWASAAATTATADTVF--------------AILTEELELSGQFITRYPGHESLWCYRRFVCQSWL 555
H KS AWSHRRW Q + S SDV ++ D V + E+ IC VAE+YPKNYYAW+ R W+V+ L L++E V W HVSDH +HR+ +L +L G+ ++ F I EE I RYPGHESLWCYRRF+ W
Sbjct: 167 HPKSGEAWSHRRWVLRQVKDFESRNSKQL-SDVSSQPHSSNVDDFVRNDHFSTEIRICAQVAEIYPKNYYAWTHRQWLVK---------------LFDFEELKQELRRVSRWNDLHVSDHCGFHHRQFVLLCCLERSKLHSGIVLKDFDEGNSSNSDQFHHEKLESSEDCEFCEIFREEFVYLSDMIRRYPGHESLWCYRRFLWSYWF 358
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A444V5B1_ACIRT (Protein prenyltransferase alpha subunit repeat-containing protein 1 n=4 Tax=Acipenseroidei TaxID=186622 RepID=A0A444V5B1_ACIRT) HSP 1 Score: 86.7 bits (213), Expect = 2.080e-15 Identity = 66/204 (32.35%), Postives = 95/204 (46.57%), Query Frame = 1
Query: 7 KSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFG----LAWASAAATTATAD------------------TVFAILTEELELSGQFITRYPGHESLWCYRRFVCQSW 552
KSP W HRRW + + A +A A + LQ E+ C+ A YP NY AWS RIWV+ Q+L AK++ +V +E ++ W+S HVSDHS ++R+ LL+ + +A+A +T++ V + EELEL I YPGHE+LWC+RR+V W
Sbjct: 135 KSPETWIHRRWVLQSLIQECCPSKACKERSGAVAVTAAQTERLQRILQEEMKACSEAAGRYPSNYNAWSHRIWVI-QNL--------AKDNKKV---FLDELSSMKYWVSMHVSDHSGFHYRQFLLKSLVEDPGCVLDKTASALQSTSNEHCGSLPKEEASAEIQRTVVPDLFDEELELCTDLIESYPGHETLWCHRRYVFFLW 326
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: UPI000C6D2F59 (protein prenyltransferase alpha subunit repeat-containing protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D2F59) HSP 1 Score: 81.3 bits (199), Expect = 1.150e-13 Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 1
Query: 136 VLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGLAW--ASAAATTATADTV-------------------FAILTEELELSGQFITRYPGHESLWCYRRFV 540
+ +++ E +C+ AE YP NYYAWS RIWV+++ + K A+EE + E+W+ H+SDHS ++R+ L+ S + + + T+ + +L +EL L+ I YPGHE+LWC+RRFV
Sbjct: 153 IKTIKYEFEVCSRAAERYPNNYYAWSHRIWVIQELIVDKKN-----------IAIEELKN-TESWVCNHISDHSGFHYRQFLITTCLKETGNHQSPSLSKSQESTIENIQDKGSDKDGLIVTNETWLLLRQELVLNSDLIISYPGHEALWCHRRFV 296
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: M7BQN7_CHEMY (Protein prenyltransferase alpha subunit repeat-containing protein 1 n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7BQN7_CHEMY) HSP 1 Score: 78.2 bits (191), Expect = 1.990e-12 Identity = 61/205 (29.76%), Postives = 87/205 (42.44%), Query Frame = 1
Query: 19 AWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQA----ELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGLAW---------------------------ASAAATTATADTVFAILTEELELSGQFITRYPGHESLWCYRRFV 540
AW+ RRW Q + + + T ++ G VPV +Q E+ +C A YP NY AWS RIW++++ G + V L +E + W+S HVSDHS ++RK L++ G + A T + +L EELEL I +PGHE+LWCYRR V
Sbjct: 30 AWNVRRWVLQQLIQENSLPTLVTKGNL--------GTVPVERIQRLVQEEMDVCCEAAGRYPSNYNAWSHRIWILQR--------LGKLD----VKILLDELSSTKHWVSMHVSDHSGFHYRKFLIKSLIGRTVTDNSILVQNQLVNEPTPSLPKDEKNEASEAVCTEELRVDLPHLLEEELELCTDLIDTFPGHETLWCYRRHV 214
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A397S934_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397S934_9GLOM) HSP 1 Score: 76.6 bits (187), Expect = 5.150e-12 Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 1
Query: 1 HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNH-RKNLLRLT----------FGLAWASAAATTAT-----------ADTVFAILTEELELSGQFITRYPGHESLWCYRRFVCQSW----LATLLHDAAG 582
H+K W HR+W Q + P D +S Q E+ I VAELYPKNYYAW+ R W++ + + +SL S +E ++ W+ +++SD+S H ++ L+RL+ +G++ T +D++ ++ +E++ + I RYPGHESLW + RF+ W LA L+++ G
Sbjct: 130 HTKHSTIWFHRKWIIQQHV---------------------PSDD--ISWQHEIDITRRVAELYPKNYYAWTYRHWILLKI---------SDDSLHSQSFFVDELKIMKIWVQKNISDYSGFQHLQRCLIRLSQYYDNSFSDFYGISRKDILEKINTKLQNQGLKNKDSDSIVSLWYKEIQFTKDLILRYPGHESLWYHLRFLSFVWIWLKLAGYLNNSIG 317
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Match: A0A8H7W2F7_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7W2F7_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 6.220e-12 Identity = 46/181 (25.41%), Postives = 75/181 (41.44%), Query Frame = 1
Query: 1 HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQAELAICTSVAELYPKNYYAWSQRIWVVRQHLYRAKGPTGAKESLRVVSALEEERGHVEAWLSRHVSDHSALNHRKNLLRLTFGLAWASAAATTATADTVFAILTEELELS--GQFITRYPGHESLWCYRRF 537
HSKS AW HR+W +T + + + E +CT + YP+NYY+W+ R W+++ + + + LE E W+ ++SD+S + + L+ L + TE++ + Q I +YPGHESLWC+RRF
Sbjct: 130 HSKSSVAWYHRQWIYTHF-----------------------NQLLHIDIANEFKLCTVTSAAYPRNYYSWTYRYWILKTYC------------INNIPLLEREYRDTRHWIETNISDYSGFQYLQQLMGL-------------------LKLDTEDIHMKWLDQLIIKYPGHESLWCHRRF 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5380.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5380.3.1 >prot_P-wetherbeei_contig5380.3.1 ID=prot_P-wetherbeei_contig5380.3.1|Name=mRNA_P-wetherbeei_contig5380.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=310bp HSKSPNAWSHRRWCWTQALSATAATSAATTSDVDLAAEATPGDVPVLSLQback to top mRNA from alignment at P-wetherbeei_contig5380:2263..3879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5380.3.1 ID=mRNA_P-wetherbeei_contig5380.3.1|Name=mRNA_P-wetherbeei_contig5380.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1617bp|location=Sequence derived from alignment at P-wetherbeei_contig5380:2263..3879- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5380:2263..3879- >mRNA_P-wetherbeei_contig5380.3.1 ID=mRNA_P-wetherbeei_contig5380.3.1|Name=mRNA_P-wetherbeei_contig5380.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig5380:2263..3879- (Phaeothamnion wetherbeei SAG_119_79)back to top |