mRNA_P-wetherbeei_contig53722.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53722.1.1
Unique NamemRNA_P-wetherbeei_contig53722.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A7L9BEM7_9BACT (BatA domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BEM7_9BACT)

HSP 1 Score: 230 bits (586), Expect = 6.970e-69
Identity = 115/178 (64.61%), Postives = 147/178 (82.58%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPL-VYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            EQ S  R+I++Y+DNS+SMSVP  +   ALDAGI + ++++EVFPPDTRY+L+TNDFAPFSNS+KTKTEV DLLTQVRLSP+SR++NEV+ERI N S  QA+ ++FWISDFQ+ST G  +   + D++QR HLVP+T     NIF DTA+LE+PFVVGGEKNTLH+R+RN+G KSVEQ
Sbjct:   82 EQVSAMRSITLYVDNSMSMSVPSHDNVRALDAGINFAQQVIEVFPPDTRYQLVTNDFAPFSNSFKTKTEVTDLLTQVRLSPISRTVNEVRERITN-SEGQAATDIFWISDFQKSTFGEPHAQWLTDSSQRLHLVPITRMPQANIFADTAWLESPFVVGGEKNTLHVRLRNEGTKSVEQ 258          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A3D3I586_9BACT (BatA domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D3I586_9BACT)

HSP 1 Score: 219 bits (558), Expect = 7.870e-65
Identity = 106/176 (60.23%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVE 528
            EQ +  RNI +YLDNS SMS  VGEKT ALDAG G+++ IV++FPPDTRY+L+TNDFAPFSNS+KT+TE++DLLTQVRLS VSR++ EV +RI      +   ++FWISDFQ+ST G       D + +WHLVP+ +  ++NIF+DT YLENPFV+GGEKNT+ IR+RN G K VE
Sbjct:   82 EQVTAARNIVLYLDNSFSMSAQVGEKTRALDAGTGFIREIVDLFPPDTRYKLITNDFAPFSNSFKTQTEILDLLTQVRLSAVSRTVEEVNDRI---GGDKNGTDIFWISDFQESTSGLSGGFEADPSSQWHLVPVAFGQSSNIFVDTVYLENPFVIGGEKNTIKIRLRNVGSKQVE 254          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A385SDN3_9BACT (BatA domain-containing protein n=2 Tax=Chryseolinea TaxID=1433993 RepID=A0A385SDN3_9BACT)

HSP 1 Score: 212 bits (539), Expect = 4.890e-62
Identity = 106/177 (59.89%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            EQ  T +NI +YLDNS SMS    +KT  LDAG+ + + IVEVFPPDTRYRL+TNDF+PFSN+YKTK EV+DLLTQ+RLSPVSRS  E++ERI+     +   E+FWISDFQ+ST+G +     D+T R HLVP+ Y   +N+FID+AYLENPF  GG KN LH+++RNDG K V Q
Sbjct:   82 EQVGTGQNILLYLDNSQSMSALTDDKTRGLDAGVSFARSIVEVFPPDTRYRLITNDFSPFSNTYKTKAEVLDLLTQIRLSPVSRSQVEIQERIRQ-EGAKRDREIFWISDFQKSTLGQVT--APDSTTRLHLVPIGYGQLSNVFIDSAYLENPFSAGGGKNVLHVKIRNDGRKDVTQ 255          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A6N4EQV0_9RHOO (BatA domain-containing protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EQV0_9RHOO)

HSP 1 Score: 210 bits (535), Expect = 1.780e-61
Identity = 99/176 (56.25%), Postives = 136/176 (77.27%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVE 528
            EQ ++ +NI+IYLDNS SM+ PV +K  A DA  G+V +I + FPPDTRYRL+TNDFAPFSN++KTK+E++DLL+Q+R S +SR+  EVK RIQ+ S+     EVFWISDFQ+ST+G LN +  DT  +WHLV L   N+ NIFID+ YLENP ++GGE+N++ +++RN G +SV+
Sbjct:   82 EQITSGKNITIYLDNSFSMTAPVKDKVRAFDAATGFVDQITQTFPPDTRYRLVTNDFAPFSNTFKTKSELLDLLSQMRPSAISRTFEEVKNRIQDDSK---PAEVFWISDFQKSTLGELNGIKIDTAYQWHLVSLPVANSANIFIDSVYLENPLMIGGERNSVKVKLRNSGSRSVD 254          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A1T5LSL7_9BACT (N-terminal double-transmembrane domain-containing protein n=1 Tax=Ohtaekwangia koreensis TaxID=688867 RepID=A0A1T5LSL7_9BACT)

HSP 1 Score: 209 bits (531), Expect = 7.370e-61
Identity = 98/176 (55.68%), Postives = 133/176 (75.57%), Query Frame = 1
Query:    4 QFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            Q + N  I +YLDNS SMS  + +K   LDAG+ +V+ IV +FPPDTRY+L+TNDFAPFSNS+KTK+EV+DLLTQVRLSPVSR++ EV +R+++    Q   EVFWISD Q+ST+G + P   D++ +W LVP+ + +  NIF+DT YLENPF   GEKN L +++RNDG++ V+Q
Sbjct:   83 QLTNNHTIVLYLDNSQSMSAQMEDKVRGLDAGVTFVRNIVSLFPPDTRYKLITNDFAPFSNSFKTKSEVLDLLTQVRLSPVSRTMQEVLDRVRHQGHAQQQQEVFWISDLQKSTLGII-PKALDSSAQWRLVPIRFASLANIFVDTVYLENPFAASGEKNVLRVKVRNDGKRDVDQ 257          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: UPI00191D9528 (BatA and WFA domain-containing protein n=1 Tax=Chryseolinea sp. Jin1 TaxID=2801331 RepID=UPI00191D9528)

HSP 1 Score: 206 bits (524), Expect = 7.550e-60
Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            EQ   N+NI +YLDNS SMS    +KT  LDA + + + IV+VFPPDTRYRL+TNDF+PFSN+YKTK EV+DLLTQVRLSPVSR+  E++ERI+     + + E+FW+SD Q+ST+G +     D++ R H+VP+ +   +N+F+D+AYLENPF  GG KN LH+++RNDG K VEQ
Sbjct:   82 EQMGANQNIVLYLDNSQSMSAQTDDKTRGLDAAVSFARSIVDVFPPDTRYRLITNDFSPFSNTYKTKAEVLDLLTQVRLSPVSRTYAEIQERIRQ-EGTRRNPEIFWVSDLQKSTLGPITTAP-DSSTRLHVVPIAFGQLSNVFVDSAYLENPFSAGGGKNVLHVKVRNDGRKDVEQ 256          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A2W4NV62_9BACT (BatA domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4NV62_9BACT)

HSP 1 Score: 198 bits (503), Expect = 1.130e-56
Identity = 104/173 (60.12%), Postives = 130/173 (75.14%), Query Frame = 1
Query:   13 TNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            ++R+I+IYLDNS SMS  +  +  ALDA + +   I+++FPPDTRYRLLTNDFAP SN+ KT  EV DLLTQVRLSPV+RS  E+  RI+ LS    + EVFWISDFQQST GS  P V D+T RWHLVP+    N+N+FIDTAYL+NPF +G E+N+L +RMRNDG +  EQ
Sbjct:  112 SHRDITIYLDNSFSMSAQMEGRARALDAAVTFATEIIDLFPPDTRYRLLTNDFAPSSNTRKTGEEVADLLTQVRLSPVTRSAAEIINRIR-LSDPSRNEEVFWISDFQQSTFGS--PPVPDSTIRWHLVPVVPTVNSNVFIDTAYLDNPFAIGQERNSLTVRMRNDGNREREQ 281          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A7Y4XNG7_9BACT (BatA domain-containing protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XNG7_9BACT)

HSP 1 Score: 197 bits (500), Expect = 2.020e-56
Identity = 94/173 (54.34%), Postives = 130/173 (75.14%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEK 519
            EQ +  R +++Y+DNS SM   VGEKT ALDA + + + +V +F PDTRY+LLTNDFAPFSNSYKTKTE++DLL Q+RLSPVSRS NE+ +RI    +     ++FW+SDFQ+ST+G++N    D+ Q   LVP+  ++  N+ +D+AYLE+PFVVGG++N L+IR+RN G K
Sbjct:   82 EQITAGREVTLYIDNSYSMLSLVGEKTRALDASLRFSQEVVSLFSPDTRYKLLTNDFAPFSNSYKTKTEILDLLAQIRLSPVSRSFNEISQRIGTQRQ-----DIFWLSDFQKSTLGNVNASSIDSLQSLRLVPIALEDAANVLVDSAYLEDPFVVGGQRNALNIRLRNIGTK 249          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A364Y0R9_9BACT (BatA domain-containing protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364Y0R9_9BACT)

HSP 1 Score: 197 bits (500), Expect = 2.230e-56
Identity = 98/177 (55.37%), Postives = 134/177 (75.71%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVEQ 531
            EQ  ++R+I IYLDNS SMS  + +KT  LDA +G+ + IV++FPPDTRY+L+TNDFAPFSN +KTK E+IDLLTQ+RLS VSR+ +E++ERI+    ++A  E+FWISDFQ+ST G L     D++   HLVP+ +    N+F+D+A+LENPF  GGEKN L +R+RNDG + V+Q
Sbjct:   82 EQLGSDRSIVIYLDNSQSMSAQLADKTKGLDAALGFARSIVQLFPPDTRYKLITNDFAPFSNVFKTKPEMIDLLTQIRLSSVSRTASEIQERIRQ-DGIRAK-EIFWISDFQKSTFGKLQTN-RDSSSNIHLVPIAFAAIPNVFVDSAFLENPFAAGGEKNVLKVRVRNDGMRDVDQ 255          
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Match: A0A355BR26_9BACT (BatA domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A355BR26_9BACT)

HSP 1 Score: 196 bits (499), Expect = 2.740e-56
Identity = 98/176 (55.68%), Postives = 131/176 (74.43%), Query Frame = 1
Query:    1 EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRYRLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYLENPFVVGGEKNTLHIRMRNDGEKSVE 528
            EQ +  R++++YLDNS SM     +KT ALDAG+ +++ IV +FPPDTRY  +TNDFAP +NSYKTK+EV+DLLTQVRLSPVSRS  EV++RI    R     EVFWI+DFQ+ST G  +P V D+   W LVP+   + +NI ID+ YLE+PFVVGG++NTL++R+RN G ++ E
Sbjct:   82 EQLTAGRDVTVYLDNSYSMLSQTADKTRALDAGVRFIQEIVGLFPPDTRYHFITNDFAPSANSYKTKSEVLDLLTQVRLSPVSRSFREVQQRIGANDR-----EVFWIADFQKSTFGIEDPPVPDSLVSWRLVPIPLTDASNILIDSVYLEDPFVVGGQRNTLNVRLRNVGPRTRE 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L9BEM7_9BACT6.970e-6964.61BatA domain-containing protein n=1 Tax=Flammeovirg... [more]
A0A3D3I586_9BACT7.870e-6560.23BatA domain-containing protein n=1 Tax=Cytophagale... [more]
A0A385SDN3_9BACT4.890e-6259.89BatA domain-containing protein n=2 Tax=Chryseoline... [more]
A0A6N4EQV0_9RHOO1.780e-6156.25BatA domain-containing protein n=1 Tax=Azospira or... [more]
A0A1T5LSL7_9BACT7.370e-6155.68N-terminal double-transmembrane domain-containing ... [more]
UPI00191D95287.550e-6055.93BatA and WFA domain-containing protein n=1 Tax=Chr... [more]
A0A2W4NV62_9BACT1.130e-5660.12BatA domain-containing protein n=1 Tax=Bacteroidet... [more]
A0A7Y4XNG7_9BACT2.020e-5654.34BatA domain-containing protein n=1 Tax=Cyclobacter... [more]
A0A364Y0R9_9BACT2.230e-5655.37BatA domain-containing protein n=1 Tax=Chryseoline... [more]
A0A355BR26_9BACT2.740e-5655.68BatA domain-containing protein n=1 Tax=Cytophagale... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53722contigP-wetherbeei_contig53722:5..535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1237149.C900_05597
PFAMsBatA,CARDB
Model size531
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.78e-34
EggNOG OGsCOG1361@1|root,COG1361@2|Bacteria,4PKPA@976|Bacteroidetes
DescriptionAerotolerance regulator N-terminal
Cds size531
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186803.448286-CDS-P-wetherbeei_contig53722:4..5351683186803.448286-CDS-P-wetherbeei_contig53722:4..535Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53722 5..535 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53722.1.1prot_P-wetherbeei_contig53722.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53722 5..535 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53722.1.1

>prot_P-wetherbeei_contig53722.1.1 ID=prot_P-wetherbeei_contig53722.1.1|Name=mRNA_P-wetherbeei_contig53722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp
EQFSTNRNISIYLDNSLSMSVPVGEKTSALDAGIGYVKRIVEVFPPDTRY
RLLTNDFAPFSNSYKTKTEVIDLLTQVRLSPVSRSLNEVKERIQNLSRVQ
ASGEVFWISDFQQSTVGSLNPLVYDTTQRWHLVPLTYQNNTNIFIDTAYL
ENPFVVGGEKNTLHIRMRNDGEKSVEQ
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mRNA from alignment at P-wetherbeei_contig53722:5..535+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53722.1.1 ID=mRNA_P-wetherbeei_contig53722.1.1|Name=mRNA_P-wetherbeei_contig53722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53722:5..535+ (Phaeothamnion wetherbeei SAG_119_79)
GAACAGTTCTCAACAAATCGCAATATTTCAATCTACTTAGATAACTCATT AAGCATGTCAGTGCCAGTAGGTGAGAAGACAAGTGCGTTGGATGCGGGTA TCGGCTACGTGAAAAGAATTGTTGAAGTATTTCCGCCCGATACACGATAT CGATTGCTCACAAATGATTTTGCTCCATTCTCAAATTCATATAAAACAAA AACAGAAGTTATCGATCTGCTTACGCAAGTTCGATTATCACCGGTAAGCC GGAGTTTGAATGAAGTTAAAGAGCGGATTCAAAATCTTTCACGCGTGCAA GCATCAGGTGAAGTTTTCTGGATCTCGGATTTTCAACAATCTACGGTCGG ATCATTAAACCCTTTGGTGTACGATACAACTCAACGTTGGCACCTGGTTC CGTTAACATATCAGAACAACACAAACATTTTTATTGATACAGCTTATCTC GAAAATCCGTTTGTGGTTGGCGGTGAAAAGAACACGCTACACATCCGCAT GCGCAACGATGGTGAAAAATCCGTTGAACAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53722:5..535+

>mRNA_P-wetherbeei_contig53722.1.1 ID=mRNA_P-wetherbeei_contig53722.1.1|Name=mRNA_P-wetherbeei_contig53722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig53722:5..535+ (Phaeothamnion wetherbeei SAG_119_79)
GAACAGTTCTCAACAAATCGCAATATTTCAATCTACTTAGATAACTCATT
AAGCATGTCAGTGCCAGTAGGTGAGAAGACAAGTGCGTTGGATGCGGGTA
TCGGCTACGTGAAAAGAATTGTTGAAGTATTTCCGCCCGATACACGATAT
CGATTGCTCACAAATGATTTTGCTCCATTCTCAAATTCATATAAAACAAA
AACAGAAGTTATCGATCTGCTTACGCAAGTTCGATTATCACCGGTAAGCC
GGAGTTTGAATGAAGTTAAAGAGCGGATTCAAAATCTTTCACGCGTGCAA
GCATCAGGTGAAGTTTTCTGGATCTCGGATTTTCAACAATCTACGGTCGG
ATCATTAAACCCTTTGGTGTACGATACAACTCAACGTTGGCACCTGGTTC
CGTTAACATATCAGAACAACACAAACATTTTTATTGATACAGCTTATCTC
GAAAATCCGTTTGTGGTTGGCGGTGAAAAGAACACGCTACACATCCGCAT
GCGCAACGATGGTGAAAAATCCGTTGAACAA
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