mRNA_P-wetherbeei_contig53721.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53721.1.1
Unique NamemRNA_P-wetherbeei_contig53721.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: UPI001AC43E21 (Enoyl-CoA hydratase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001AC43E21)

HSP 1 Score: 267 bits (682), Expect = 8.220e-88
Identity = 130/176 (73.86%), Postives = 149/176 (84.66%), Query Frame = 1
Query:    7 SNAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAPP 534
            ++ GG+ATLT+NRP QFNA+S  ML  LQAALD +  DPA+RVVVI   G+AFCPGHDLKEMLAN T++F+G LF  CC VM+++ R+PQP+IARVHGIATAAGCQ+VA CDLAVA   ARFATSGVNFGLFCATPGVAVSRNVS+K+A EMLM GEFIDA TAL WGLVNRV PP
Sbjct:   16 ADGGGIATLTMNRPAQFNAISGAMLTQLQAALDAVGNDPAVRVVVIGGAGRAFCPGHDLKEMLANSTEDFIGGLFRRCCNVMLTMQRIPQPIIARVHGIATAAGCQIVAGCDLAVAEEGARFATSGVNFGLFCATPGVAVSRNVSQKRAFEMLMTGEFIDARTALDWGLVNRVVPP 191          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A6N9RA77_9RHOO (Enoyl-CoA hydratase n=1 Tax=Aromatoleum sp. TaxID=2307007 RepID=A0A6N9RA77_9RHOO)

HSP 1 Score: 259 bits (663), Expect = 6.330e-85
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = 1
Query:   16 GGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAPP 534
            GG+ATLTLNRP QFNA++  ML  +QAALD IA D A+R+VV+A  G+AFCPGHDLKEMLAN T+ F+G LF  CC VM+++ R+PQPVIA+VHGIATAAGCQ+VAACDLAVA   ARFATSGVNFGLFCATPGV VSRNVS+K+A EML  GEFIDA TAL WGLVNRV PP
Sbjct:   19 GGIATLTLNRPAQFNAINGAMLTEMQAALDAIADDHAVRIVVVAGAGRAFCPGHDLKEMLANSTEAFIGDLFRRCCDVMLTLQRIPQPVIAKVHGIATAAGCQIVAACDLAVAEEGARFATSGVNFGLFCATPGVPVSRNVSQKRAFEMLFTGEFIDAPTALAWGLVNRVVPP 191          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A537A4C1_9PROT (Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A4C1_9PROT)

HSP 1 Score: 256 bits (654), Expect = 1.430e-83
Identity = 128/174 (73.56%), Postives = 147/174 (84.48%), Query Frame = 1
Query:   10 NAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAP 531
            +AGG+ATLTLNRP Q+NA+   ML+ LQ+A   IAAD A+RVVVIA  GKAF PGHDLKEMLAN  + F+G LF  CC VM++I R+PQPVIA+VHGIATAAGCQLVAACDLAVA+ DARFATSG+NFGLFCATPGVAVSR++SRK+A EML  G+FIDA TAL WGLVNRV P
Sbjct:   16 DAGGIATLTLNRPAQYNAIDSAMLDELQSAFGRIAADAAVRVVVIAGAGKAFSPGHDLKEMLANSREAFIGDLFRRCCDVMLTIQRIPQPVIAQVHGIATAAGCQLVAACDLAVAADDARFATSGINFGLFCATPGVAVSRDISRKRAFEMLFTGDFIDAQTALAWGLVNRVVP 189          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A1F4B6B3_9PROT (Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19 TaxID=1797486 RepID=A0A1F4B6B3_9PROT)

HSP 1 Score: 256 bits (653), Expect = 2.160e-83
Identity = 129/173 (74.57%), Postives = 147/173 (84.97%), Query Frame = 1
Query:   13 AGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAP 531
            +GG+ATLTLNRPK+FN +S  ML+AL++A D  AAD  +RVVV+AA+G AF  GHDLKEM+ANRT EF+G LF +C +VM+ I  LPQPVIARVHGIATAAGCQLVAACDLAVAST ARFATSG+NFGLFCATPGV VSRNVSRK+A EML  GEF+DA TAL WGLVNRV P
Sbjct:   18 SGGVATLTLNRPKKFNPISSAMLDALESAFDRAAADRVVRVVVLAASGPAFSAGHDLKEMMANRTPEFIGELFGHCSRVMLRIQSLPQPVIARVHGIATAAGCQLVAACDLAVASTAARFATSGINFGLFCATPGVPVSRNVSRKRAFEMLFTGEFVDAHTALAWGLVNRVVP 190          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A521Z094_9PROT (Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521Z094_9PROT)

HSP 1 Score: 254 bits (649), Expect = 8.460e-83
Identity = 124/178 (69.66%), Postives = 148/178 (83.15%), Query Frame = 1
Query:    1 ICSNAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAPP 534
            +C    G+ATLTLNRPKQ+NA+S D+L  L+++L DIA D ++ VVV+AANG AFC GHDLKEM+ANRT +F+G+LFD C ++M+++  LPQPVIARVHG+ATAAGCQLVA CDLAVAST ARFATSG+N GLFCATPGV VSRNV RK+A EML  GEFIDA TAL+ GLVNRV  P
Sbjct:   14 LCQKKNGVATLTLNRPKQYNAMSSDVLRELKSSLSDIARDESVCVVVLAANGPAFCTGHDLKEMMANRTPQFIGNLFDQCSEIMLNLQDLPQPVIARVHGVATAAGCQLVAQCDLAVASTQARFATSGINLGLFCATPGVPVSRNVPRKRAFEMLFTGEFIDAQTALELGLVNRVTTP 191          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A5C7EH64_9PROT (Enoyl-CoA hydratase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5C7EH64_9PROT)

HSP 1 Score: 253 bits (647), Expect = 1.820e-82
Identity = 127/174 (72.99%), Postives = 148/174 (85.06%), Query Frame = 1
Query:   10 NAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAP 531
            +A G+ATLTLNRPK +NALS  +L ALQ AL+ I  D ++RVVVIA  GKAFCPGHDLKE+ ANR   F+  LFD C ++M+++TR+PQPVIARVHG+ATAAGCQLVA CDLAVAS +ARFATSG+NFGLFC+TPGVA+SRNVSRKQAMEMLM GEFIDA TAL+ GLVNRV P
Sbjct:   18 DANGVATLTLNRPKAYNALSKALLEALQEALEAIGGDSSVRVVVIAGAGKAFCPGHDLKELRANRDPVFIRRLFDQCSRMMLTLTRIPQPVIARVHGLATAAGCQLVAQCDLAVASEEARFATSGINFGLFCSTPGVALSRNVSRKQAMEMLMTGEFIDARTALERGLVNRVVP 191          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A7S6SIU4_9GAMM (Enoyl-CoA hydratase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7S6SIU4_9GAMM)

HSP 1 Score: 249 bits (636), Expect = 8.230e-81
Identity = 127/173 (73.41%), Postives = 140/173 (80.92%), Query Frame = 1
Query:   13 AGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAP 531
            A G+ TLTLNRP+QFNAL  ++L AL AAL DIA DPA RVVVIAA G+AFC GHDLKEM+A R Q F+  LF  C  +M +I  LPQPVIARV GIATAAGCQLVAACDLAVA+ DARFATSG+N GLFCATP V VSRN+ RK+A EML  GEFIDAATALQWGLVNRV P
Sbjct:   18 AEGVVTLTLNRPRQFNALGGELLGALAAALQDIARDPAARVVVIAAAGRAFCAGHDLKEMMARREQAFISELFSRCGAIMQAIQALPQPVIARVQGIATAAGCQLVAACDLAVAAEDARFATSGINLGLFCATPAVPVSRNIGRKRAFEMLFTGEFIDAATALQWGLVNRVVP 190          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A1Q3VVY0_9PROT (Enoyl-CoA hydratase n=1 Tax=Candidatus Accumulibacter sp. 66-26 TaxID=1895689 RepID=A0A1Q3VVY0_9PROT)

HSP 1 Score: 246 bits (628), Expect = 1.260e-79
Identity = 123/176 (69.89%), Postives = 146/176 (82.95%), Query Frame = 1
Query:    7 SNAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAPP 534
            S+AGG+ TLTLNRP QFNALS  M+ ALQ  LD +AADPA+RVV++A  GKAFC GHDLKEM AN  + F+ +LF  C K+MM++T++PQPVIARVHGIATAAGCQLV+ CDLAVA+  ARFATSG+N GLFCATPGV +SRN+ RKQA+EML+ G+FIDA TA Q GLVNRV PP
Sbjct:   14 SDAGGVTTLTLNRPAQFNALSSAMIAALQTELDAVAADPAVRVVILAGAGKAFCAGHDLKEMRANHEKPFMQALFKQCGKMMMTLTQMPQPVIARVHGIATAAGCQLVSMCDLAVAADVARFATSGINVGLFCATPGVGLSRNLGRKQALEMLLTGDFIDAMTAQQQGLVNRVVPP 189          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: W6MC34_9GAMM (Putative enoyl-CoA hydratase n=2 Tax=Candidatus Competibacteraceae TaxID=1400857 RepID=W6MC34_9GAMM)

HSP 1 Score: 244 bits (624), Expect = 5.290e-79
Identity = 123/177 (69.49%), Postives = 146/177 (82.49%), Query Frame = 1
Query:    1 ICSNAGGMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAP 531
            +C   GG+ TLTLNRPKQ+NALS  ML ALQA LD +AAD  +RVVVIA +G AFC GHDLKEM A+  Q F  +LF  C +VM++I R+PQPV+ARVHGIATAAGCQLVAACDLAVAS +ARFATSG+N GLFCATPGVA+SRN+ RKQA+++L+ G+FIDA TALQ GL+N VAP
Sbjct:   13 LCQTDGGIVTLTLNRPKQYNALSQAMLAALQAELDRVAADKTVRVVVIAGSGPAFCAGHDLKEMRAHTDQAFHHALFAQCGRVMLTINRMPQPVVARVHGIATAAGCQLVAACDLAVASDNARFATSGINVGLFCATPGVALSRNLGRKQALDLLLTGDFIDAPTALQQGLINCVAP 189          
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Match: A0A8B5WS25_9GAMM (Enoyl-CoA hydratase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A8B5WS25_9GAMM)

HSP 1 Score: 244 bits (622), Expect = 1.060e-78
Identity = 127/172 (73.84%), Postives = 143/172 (83.14%), Query Frame = 1
Query:   19 GMATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCPGHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGCQLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMPGEFIDAATALQWGLVNRVAPP 534
            G+ATLTLNRPKQ+NALS  ML ALQAALD +AAD  +RVVVIA  G AFC GHDLKEM A   + F  +LF  C +VM++I RLPQPVIARVHGIATAAGCQLVAACDLAVAS +ARFA SG+N GLFCATPGVA+SRN+SRK A+EML+ GEFIDA TALQ GL+NRVA P
Sbjct:   19 GVATLTLNRPKQYNALSQAMLGALQAALDAVAADRTVRVVVIAGAGPAFCAGHDLKEMRARTDRAFHQALFAQCGQVMLTINRLPQPVIARVHGIATAAGCQLVAACDLAVASDNARFAVSGINLGLFCATPGVALSRNLSRKPALEMLLTGEFIDAPTALQQGLINRVATP 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53721.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AC43E218.220e-8873.86Enoyl-CoA hydratase n=1 Tax=Burkholderiales bacter... [more]
A0A6N9RA77_9RHOO6.330e-8573.99Enoyl-CoA hydratase n=1 Tax=Aromatoleum sp. TaxID=... [more]
A0A537A4C1_9PROT1.430e-8373.56Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bac... [more]
A0A1F4B6B3_9PROT2.160e-8374.57Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bac... [more]
A0A521Z094_9PROT8.460e-8369.66Enoyl-CoA hydratase n=1 Tax=Betaproteobacteria bac... [more]
A0A5C7EH64_9PROT1.820e-8272.99Enoyl-CoA hydratase n=2 Tax=Proteobacteria TaxID=1... [more]
A0A7S6SIU4_9GAMM8.230e-8173.41Enoyl-CoA hydratase n=2 Tax=Gammaproteobacteria ba... [more]
A0A1Q3VVY0_9PROT1.260e-7969.89Enoyl-CoA hydratase n=1 Tax=Candidatus Accumulibac... [more]
W6MC34_9GAMM5.290e-7969.49Putative enoyl-CoA hydratase n=2 Tax=Candidatus Co... [more]
A0A8B5WS25_9GAMM1.060e-7873.84Enoyl-CoA hydratase n=1 Tax=Candidatus Competibact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53721contigP-wetherbeei_contig53721:3..536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1454004.AW11_00293
Preferred namefadB3
PFAMsECH_1
Model size534
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.98e-76
EggNOG OGsCOG1024@1|root,COG1024@2|Bacteria,1MUJ7@1224|Proteobacteria,2VIP5@28216|Betaproteobacteria,1KQB6@119066|unclassified Betaproteobacteria
DescriptionEnoyl-CoA hydratase/isomerase
Cds size513
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186803.4161718-CDS-P-wetherbeei_contig53721:2..5151683186803.4161718-CDS-P-wetherbeei_contig53721:2..515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53721 3..515 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186803.42526-UTR-P-wetherbeei_contig53721:515..5361683186803.42526-UTR-P-wetherbeei_contig53721:515..536Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig53721 516..536 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53721.1.1prot_P-wetherbeei_contig53721.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53721 3..515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53721.1.1

>prot_P-wetherbeei_contig53721.1.1 ID=prot_P-wetherbeei_contig53721.1.1|Name=mRNA_P-wetherbeei_contig53721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
MATLTLNRPKQFNALSMDMLNALQAALDDIAADPAIRVVVIAANGKAFCP
GHDLKEMLANRTQEFVGSLFDNCCKVMMSITRLPQPVIARVHGIATAAGC
QLVAACDLAVASTDARFATSGVNFGLFCATPGVAVSRNVSRKQAMEMLMP
GEFIDAATALQWGLVNRVAPP
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mRNA from alignment at P-wetherbeei_contig53721:3..536-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53721.1.1 ID=mRNA_P-wetherbeei_contig53721.1.1|Name=mRNA_P-wetherbeei_contig53721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig53721:3..536- (Phaeothamnion wetherbeei SAG_119_79)
ATCTGCAGCAACGCGGGTGGCATGGCTACGCTTACCCTCAACCGGCCCAA GCAGTTCAATGCACTGTCGATGGACATGCTCAATGCGCTGCAAGCTGCGT TGGACGATATCGCCGCCGACCCGGCCATCCGCGTCGTGGTGATCGCGGCC AACGGCAAAGCCTTCTGCCCCGGGCACGATCTGAAAGAAATGCTCGCCAA CCGCACGCAGGAGTTCGTCGGTTCGCTGTTCGACAACTGCTGCAAGGTGA TGATGAGCATCACGCGCTTGCCGCAGCCGGTGATCGCGCGCGTGCACGGC ATCGCCACCGCCGCCGGCTGCCAACTGGTCGCCGCCTGCGACCTTGCCGT GGCATCGACCGACGCGCGCTTTGCAACATCGGGCGTCAATTTCGGGCTGT TTTGCGCAACGCCGGGCGTCGCGGTCTCGCGCAACGTGTCGCGCAAGCAG GCGATGGAAATGCTGATGCCCGGCGAATTCATCGATGCCGCCACTGCCTT GCAGTGGGGGCTCGTCAACCGCGTCGCGCCGCCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53721:3..536-

>mRNA_P-wetherbeei_contig53721.1.1 ID=mRNA_P-wetherbeei_contig53721.1.1|Name=mRNA_P-wetherbeei_contig53721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig53721:3..536- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTACGCTTACCCTCAACCGGCCCAAGCAGTTCAATGCACTGTCGAT
GGACATGCTCAATGCGCTGCAAGCTGCGTTGGACGATATCGCCGCCGACC
CGGCCATCCGCGTCGTGGTGATCGCGGCCAACGGCAAAGCCTTCTGCCCC
GGGCACGATCTGAAAGAAATGCTCGCCAACCGCACGCAGGAGTTCGTCGG
TTCGCTGTTCGACAACTGCTGCAAGGTGATGATGAGCATCACGCGCTTGC
CGCAGCCGGTGATCGCGCGCGTGCACGGCATCGCCACCGCCGCCGGCTGC
CAACTGGTCGCCGCCTGCGACCTTGCCGTGGCATCGACCGACGCGCGCTT
TGCAACATCGGGCGTCAATTTCGGGCTGTTTTGCGCAACGCCGGGCGTCG
CGGTCTCGCGCAACGTGTCGCGCAAGCAGGCGATGGAAATGCTGATGCCC
GGCGAATTCATCGATGCCGCCACTGCCTTGCAGTGGGGGCTCGTCAACCG
CGTCGCGCCGCCT
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