mRNA_P-wetherbeei_contig5369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI) HSP 1 Score: 306 bits (785), Expect = 1.320e-85 Identity = 207/578 (35.81%), Postives = 293/578 (50.69%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWE------AGVV----------------------------LSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAARLIRKTAELRSLCIYWNGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXVGEGITPAPPPGPWCGHWRSGDADDPATGDLALRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLADPAAWWRYAIQATLHTVRGHADGFSCER----LTRRRALRLEYSTLWQKNMG 1683
MFER VS++L+RLL EYV+ ++F+ E++++G+W G +VL+D+ +K L+DML+LPL LRHG +GRL+++IPWS L +DPI+V +DRVFL VEP++ WD A R +A+KR IAAAE+FR + L D T +GGS R G QKW+T+RL I +IVDSL+I +R VH RYEDR S+PS PFY+G + ES+ + S + GWE +G + + A+ A++++ XXXXXX G R+ X G RL++KT +L L +YWN AE GNPC M +SD+ ++A++V+ RL++R+ DA G G P P LRHR +L PVD A + LS DP+D + P+ V + + +LE FQ + MCL A+ AR+ KY + RP P L DPAAWWR+A + +R ADGFS + +RR +RLEY LW+K +G
Sbjct: 1 MFERLVSSILTRLLGEYVEDSTFNTESVKLGIWRGYLVLEDMHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRVFLVVEPKFEWDAGAVKRRERAVKRGKIAAAELFRTSPLDDTPAGST--EGGSKARWG-SGLQKWVTDRL----ITRIVDSLQIHVREVHVRYEDRTSNPSTPFYLGATLESVWLES-TDQGWEVQPGPRSGPIRRGGTGXXXXXXXXXXXXXXXXXXXENGIEATTGVASSSSSPRGDGVGGDDPAMSSGARAVGNXXXXXX-XPGARSXXXXGGSRGVVVG--DRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARKDDDA--------------------------------------------------GEAGAGNGPGEP----------------------LRHRYLLEPVDANARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLR--ADGFSHSSRFPDMAKRRRMRLEYMPLWKKALG 493
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A6H5JPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL9_9PHAE) HSP 1 Score: 240 bits (612), Expect = 2.350e-63 Identity = 167/516 (32.36%), Postives = 236/516 (45.74%), Query Frame = 1
Query: 187 LRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWE------AGVVLSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAA-------------------------------RLIRKTAELRSLCIYWNGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXVGEGITPAPPPGPWCGHWRSGDADDPATGDLA---LRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLADPAAWWRYAIQATLHTVRGHADGFS 1614
+ +K L+DML+LPL LRHG +GRL+++IPWS L +DPI+V +DR+FL VEP++ WD A +R +A+KR IAAAE+FR + L D + +GGS R G QKW+T+RL + +IVDSL+I +R VH RYEDR+S+PS PFY+G + ESL + S + GWE +G + +A + R D G A RL++KT +L L +YWN AE GNPC M +SD+ ++A++V+ RL++R+ DD DAD+ G+ A LRHR ++ PVD A + LS DP+D + P+ V + + +LE FQ + MCL A+ AR+ KY + RP P L DPAAWWR+A + +R ADGFS
Sbjct: 1 MHIKKTLMDMLELPLALRHGIIGRLQIQIPWSTLNKDPILVDVDRIFLVVEPKFEWDAGAVKQRERAVKRGKIAAAELFRTSPLDDTPAGSS--EGGSKARWG-SGLQKWVTDRL----VTRIVDSLQIHVREVHLRYEDRISNPSTPFYLGATVESLWLES-TDQGWEVQPGPRSGPIRPGGTGGEGESAVPPRNGGRRKAASENEIEATTGVAAS----SSSPRGDGVGGDDPAISSGARAVGNXXXXXXXXXXXXXXXXXXXGSRSVVVGDRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISRLIARK-------------DD--------------------------------------------------------------DADEAGAGNGAGEPLRHRYLIEPVDASARVALSVDPSDRSQPRVQAQVELGTISCQLEHFQLQGAMCLGASVARYGEVGKYFKHRPEVPVLEDPAAWWRFAFAVVVDKLR--ADGFS 427
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A482SWM9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWM9_9ARCH) HSP 1 Score: 160 bits (405), Expect = 2.520e-40 Identity = 84/201 (41.79%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHI 666
MFE+ +S +L +LL ++V+ E +++GVWSG +VL++L LK ++ ++L++P+ L +G +GRLEL IPWS LG +P+ V LD++++ VEP+Y W A R QA+K+A +AAAE+F L + + G GG G A+ W L ++KIVD ++ IR +H RYED++S P+ F VG+SFESLH+
Sbjct: 1 MFEQGLSFILKKLLRDFVEDGDNLHEKVQVGVWSGLIVLENLVLKNSIFNLLEVPVALSYGYIGRLELHIPWSRLGYEPVTVVLDKIYILVEPKYEWHSGAQERREQAMKQAKLAAAELFANQRLQENS-----GSGGYAGL-----AKNWFMGAL----LSKIVDKFQVTIRELHIRYEDKMSCPT-EFCVGISFESLHV 186
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A2R5G2R3_9STRA (Vacuolar protein sorting-associated protein 13A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2R3_9STRA) HSP 1 Score: 154 bits (389), Expect = 8.110e-35 Identity = 141/553 (25.50%), Postives = 230/553 (41.59%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDG--RKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGWEAGVVLSASADFANAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAKGGRNDAKXXXXXXXXXGLAARLIRKTAELRSLCIYW--------NGAEVGNPCCMHVSDLTPEEADIVMDRLVSRRLPDAIASCSGDDSDDNSXXXXXXXXXXXXXXXXXXXXSSEGAXXXXXXXXXXXXXXV---GEGITPAPPPGPWCGHWRSGDADDPATGDLALRHRCILRPVDVVAHITLSKDPADGALPKAAVAVTINAVDVRLEAFQYRDVMCLAAAFARFDAQHKYVQWRPVAPPLAD-PAAWWRYAIQATLHTVRGHADGFSCERLTRRRALRLEYSTLWQKNM 1680
MFE +V+ +L+R+L YV+ F + + ++ G++VL +L ++ D + +P+ LR G +G+++++IPW+HLG P+ + +DRVFL +EP ++E + +A K+A++A AE+ + + + + A G +D R A++ T RL+NKIVD++E+ +R VH RYEDRV++P F VG ++ESL + S W + F + + R D L L K L IYW NGA++ C T E + +R++ +R + + S G+ E I A A +H +L PV + + ++DP P V + I V + LE FQY D + AAF + + Y Q+RP + D P WW++AI+ATL V+ FS E +T RR RL Y LW++++
Sbjct: 1 MFEGWVANLLNRVLGAYVEDGCFRPDKVSTSIYGGHMVLSELEVRKDAFDTVGVPIKLRRGFIGQVDVKIPWTHLGSQPVEISIDRVFLILEPSLEYNERDYQRKVKARKKADLARAELRKSSGMTNPA----GDADDTDAISRAHMSEAEEMAKVGFTARLMNKIVDNIELNVRNVHVRYEDRVTNPKHAFSVGATWESLKMQSTDRH-W--------TPCFVDLVSEIKR------------------------------RLDESGKY-------LEKLLAYKLFRLDHFAIYWDPFPGTSTNGADLDYSTC------TFAEMAAIFERMIPKRQQQEEEDYRLVERETRRARAQASPAGSGAAGGLAGAGSKHGSAEELTDGRGSASDRPLEDSERIRSAAXX--XXXXXXXXHQKTRARLGTGAQHCFVLEPVSLTLKMQSNRDPRFPESPDTVVDLDIATVTLVLERFQYLDAWEMLAAFDAAEKSYPYAQFRPQGVTVRDAPRIWWQFAIRATLENVQERRRRFSPEYITDRRQDRLLYIELWKRSL 495
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A836CEC6_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEC6_9STRA) HSP 1 Score: 129 bits (323), Expect = 9.390e-32 Identity = 58/99 (58.59%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDE 360
MFER ++++L+ +L EYV+ +SFSQETIR+GVWSGN+VL+++ LK ++LD QLPL LRHG +GRLEL+IP + LG DPIV L+ V++ V P+Y WDE
Sbjct: 1 MFERLLASILTSVLGEYVESSSFSQETIRLGVWSGNLVLENMTLKASVLDPAQLPLELRHGRIGRLELKIPLTRLGTDPIVATLEHVYVVVVPKYEWDE 99
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A7S1CBN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBN4_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.250e-31 Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 1
Query: 70 ERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLSFESLHIGSARNSGW 690
E++V+ +L++LLS+YV FS + + + VWSG VVL DL LKP LD LQLPL + G VGRLE +IPW + G V +D VF+ E +Y W E A KR + AAE + + R + G GGS A + RL KIV++L++ IR +H R EDR S+P PF G++ E L + + N+ W
Sbjct: 1 EKWVAPLLTKLLSDYVKEECFSPDKVEVAVWSGYVVLNDLELKPTALDFLQLPLRVVRGYVGRLEFQIPWGNPGSKQSTVKVDEVFIVAETKYDWTPEELRAWRDADKRRRLEAAEAY------EEKRRDSAGAGGSK-------ASEAEAAGFVGRLATKIVENLQVTIRGLHVRVEDRRSNPERPFAFGVTLEGL-VARSTNARW 193
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A0P1BCL7_9BASI (Vacuolar protein sorting-associated protein n=2 Tax=Ceraceosorus TaxID=401624 RepID=A0A0P1BCL7_9BASI) HSP 1 Score: 129 bits (323), Expect = 8.870e-27 Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVW---DEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
M E +++VL+R L+ YVDG + SQ + +G+WSG+V L++LRLK + LD +LP+ ++ G +G L L IPWS+L P+ V ++ V+L P+ D+E ERAQA K +A AE+ + ++E AQK E T L+ KIVD+L+I +R +H RYED++S+P PF GL+
Sbjct: 1 MLEGVLASVLNRFLASYVDGLNTSQ--LNVGIWSGDVKLRNLRLKTSALDKFRLPIDVKEGFLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKEASVEIDDEEEEERAQAAKLEKLANAELLGTSSSIGVSE---------------ADAQK--NESFTSSLVTKIVDNLQITVRNIHVRYEDKLSNPEHPFSAGLT 179
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A061H3P9_9BASI (Uncharacterized protein n=1 Tax=Pseudozyma flocculosa PF-1 TaxID=1277687 RepID=A0A061H3P9_9BASI) HSP 1 Score: 127 bits (320), Expect = 1.310e-26 Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPR---YVWDEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
M E +++VL+R L+ YVDG + SQ + +G+WSG+V L++LRLK + LD +LP+ ++ G +G L L IPWS+L P+ V ++ V+L P+ DE ERAQA K+ +A AE L ++T G D +K E T LI KIVD+L+I +R +H RYEDR+S+P PF G++
Sbjct: 1 MLEGVLASVLNRFLAAYVDGLNTSQ--LNVGIWSGDVKLKNLRLKTSALDKFRLPIDVKEGYLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKNSSVEVDEAEEEERAQAAKQEKLANAE------LLGRDSQQTIGMSQEDAQK---------NESFTSSLITKIVDNLQITVRNIHIRYEDRLSNPEHPFSAGIT 181
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: UPI000D1C8717 (putative vacuolar protein sorting-associated protein 13F n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C8717) HSP 1 Score: 116 bits (290), Expect = 3.780e-26 Identity = 74/199 (37.19%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVWDEEAAAERAQA----LKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
MFE V +L R L +YV G S E ++I VW G+VVL+DL+LK L+ L+LPLT++ G +G + L+IPW+ LG+DP++V LDRVF+ EP V DE+ KR+ I EM ++ A G+ G D ++ W+ L+ I+ +L++ + +H RYED +S+PS PF G++
Sbjct: 1 MFEAHVLYLLRRYLGQYVRG--LSAEALQISVWKGDVVLKDLQLKAEALNALRLPLTVKAGFLGSVTLKIPWNKLGKDPVIVLLDRVFVLAEP--VEDEQLFKNENMESWLDAKRSQIEELEMALLDAKA--------GRSGDDASPE---SKSWLGS-----LVATIIGNLKVSVTNLHIRYEDTLSNPSHPFCFGVT 179
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Match: A0A316Z2F6_9BASI (Uncharacterized protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z2F6_9BASI) HSP 1 Score: 126 bits (317), Expect = 4.730e-26 Identity = 75/198 (37.88%), Postives = 114/198 (57.58%), Query Frame = 1
Query: 64 MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDMLQLPLTLRHGSVGRLELRIPWSHLGRDPIVVFLDRVFLCVEPRYVW---DEEAAAERAQALKRANIAAAEMFRVNYLADLAERRTGGQGGSDGRKRRGGAQKWMTERLTERLINKIVDSLEIRIRAVHFRYEDRVSSPSCPFYVGLS 648
M E ++ VL+R L+ YVDG + SQ + +G+WSG+V L++LRLK + LD +LP+ ++ G +G L L IPWS+L P+ V ++ V+L P+ DE+ ERA+A K+ +A AE+ ++E AQK E T L+ KIVD+L+I +R +H RYED++S+P PF GL+
Sbjct: 1 MLEGVLATVLNRFLASYVDGLNTSQ--LNVGIWSGDVKLRNLRLKTSALDKFRLPIDVKEGYLGDLTLSIPWSNLKGKPVRVLVENVYLLAAPKEASAEVDEDEERERAEAAKQEKLANAELLGGGSKVGVSEE---------------DAQK--NESFTSSLVAKIVDNLQITVRNIHVRYEDKLSNPEHPFSAGLT 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5369.1.1 >prot_P-wetherbeei_contig5369.1.1 ID=prot_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=701bp MFERFVSAVLSRLLSEYVDGASFSQETIRIGVWSGNVVLQDLRLKPALLDback to top mRNA from alignment at P-wetherbeei_contig5369:701..3414- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5369.1.1 ID=mRNA_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2714bp|location=Sequence derived from alignment at P-wetherbeei_contig5369:701..3414- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5369:701..3414- >mRNA_P-wetherbeei_contig5369.1.1 ID=mRNA_P-wetherbeei_contig5369.1.1|Name=mRNA_P-wetherbeei_contig5369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2103bp|location=Sequence derived from alignment at P-wetherbeei_contig5369:701..3414- (Phaeothamnion wetherbeei SAG_119_79)back to top |