prot_P-wetherbeei_contig5361.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5361.3.1
Unique Nameprot_P-wetherbeei_contig5361.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length129
Homology
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BLAST of mRNA_P-wetherbeei_contig5361.3.1 vs. uniprot
Match: A0A6H5KB05_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 6.470e-27
Identity = 57/116 (49.14%), Postives = 73/116 (62.93%), Query Frame = 0 
Query:    6 GLHTFVSGGNDRTLRVWDKRVQGSVGVLRGHRGPVTCADVALSDRNLLLSXXXXXXXXXXXTRSTARGPVRCLHGHRDRVTCLLRSGAAVFAGGEDGALVEWDWATGDRRDRYEGH 121
            G    VS  NDRTLR WD RV+GSVGVLRGH GPVTC     ++R++L S            R+TA+GP   L GH+DRVT LL SG +V++  ED ++ EWDW TG  + R+ G+
Sbjct: 2661 GPFAAVSCSNDRTLRTWDHRVKGSVGVLRGHTGPVTCVQQMPANRSVLASGSADGTVMMWDVRATAKGPSSTLRGHKDRVTGLLASGRSVYSCSEDASIHEWDWDTGQLKSRFFGN 2776
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BLAST of mRNA_P-wetherbeei_contig5361.3.1 vs. uniprot
Match: D8LB83_ECTSI (WD-40 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 8.820e-27
Identity = 57/116 (49.14%), Postives = 73/116 (62.93%), Query Frame = 0 
Query:    6 GLHTFVSGGNDRTLRVWDKRVQGSVGVLRGHRGPVTCADVALSDRNLLLSXXXXXXXXXXXTRSTARGPVRCLHGHRDRVTCLLRSGAAVFAGGEDGALVEWDWATGDRRDRYEGH 121
            G    VS  NDRTLR WD RV+GSVGVLRGH GPVTC     ++R++L S            R+TA+GP   L GH+DRVT LL SG +V++  ED ++ EWDW TG  + R+ G+
Sbjct: 2606 GPFAAVSCSNDRTLRTWDHRVKGSVGVLRGHTGPVTCVQQMPANRSVLASGSADGTVMMWDVRATAKGPSYTLRGHKDRVTGLLASGRSVYSCSEDASIHEWDWDTGQLKSRFFGN 2721
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BLAST of mRNA_P-wetherbeei_contig5361.3.1 vs. uniprot
Match: A0A2H4S5P0_CORMI (WD domain-containing n=1 Tax=Cordyceps militaris TaxID=73501 RepID=A0A2H4S5P0_CORMI)

HSP 1 Score: 60.5 bits (145), Expect = 3.770e-8
Identity = 45/134 (33.58%), Postives = 59/134 (44.03%), Query Frame = 0 
Query:    1 VALHGGLHTFVSGGNDRTLRVWDKRVQGSV----GVLRGHRGPVTCADVALSDRNLLLSXXXXXXXXXXXTRSTARGPVRCLHGHRDRVTCLLRSGAAVFAGGEDGALVEWDWATGD-RRDRYEGHAAGVSSVA 129
            +A+ G   +FVSGG DR + +WD     +     G   GH   V C   A     ++ S            RS +  P++ L   RD VTCL   GA V AG  DG +  +D   G    D   G  AGV+SVA
Sbjct:   78 LAVSGSNTSFVSGGGDRGVFLWDVASASTTRRFGGGAHGHTSRVNCVAFAGEGDAVVASGGFDTTVRLWDARSPSARPIQVLDEARDAVTCLAVRGAEVVAGSVDGRVRSYDVRVGACTTDVVGGRDAGVTSVA 211
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BLAST of mRNA_P-wetherbeei_contig5361.3.1 vs. uniprot
Match: G9NF73_HYPAI (Uncharacterized protein n=5 Tax=Trichoderma TaxID=5543 RepID=G9NF73_HYPAI)

HSP 1 Score: 50.8 bits (120), Expect = 8.880e-5
Identity = 34/115 (29.57%), Postives = 53/115 (46.09%), Query Frame = 0 
Query:    1 VALHGGLHTFVSGGNDRTLRVWD-------KRVQGSVGVLRGHRGPVTCADVALSDRNLLLSXXXXXXXXXXXTRSTARGPVRCLHGHRDRVTCLLRSGAAVFAGGEDGALVEWD 108
            +A+     +FVSGG DR + +WD       +R  G+    +GH   + C   A +  +L++S            RST+  P++ L   +D VT L   G  V AG  DG +  +D
Sbjct:   81 LAVAADNESFVSGGGDRAVFLWDVSKAVTTRRFGGNA---QGHSARINCVSFAGAGDSLVVSGGFDTTVRVWDVRSTSFKPIQVLSEAKDAVTSLAVMGPEVVAGSVDGRVRSYD 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5361.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KB05_9PHAE6.470e-2749.14UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LB83_ECTSI8.820e-2749.14WD-40 repeat protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A2H4S5P0_CORMI3.770e-833.58WD domain-containing n=1 Tax=Cordyceps militaris T... [more]
G9NF73_HYPAI8.880e-529.57Uncharacterized protein n=5 Tax=Trichoderma TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 95..109
score: 27.65
coord: 10..24
score: 35.8
coord: 53..67
score: 43.18
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 26..66
e-value: 5.7E-7
score: 39.2
coord: 71..108
e-value: 1.3
score: 16.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 9..23
e-value: 0.065
score: 14.1
coord: 30..66
e-value: 3.0E-6
score: 27.9
coord: 74..108
e-value: 0.018
score: 15.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..23
score: 10.074014
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 33..69
score: 11.811761
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..129
e-value: 4.1E-28
score: 100.2
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 10..128
NoneNo IPR availablePANTHERPTHR19876:SF43F-BOX/WD REPEAT-CONTAINING PROTEIN POF1coord: 10..128
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 33..69
score: 9.862871
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 53..67
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5361contigP-wetherbeei_contig5361:3217..3891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5361.3.1mRNA_P-wetherbeei_contig5361.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5361 3217..3891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5361.3.1 ID=prot_P-wetherbeei_contig5361.3.1|Name=mRNA_P-wetherbeei_contig5361.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp
VALHGGLHTFVSGGNDRTLRVWDKRVQGSVGVLRGHRGPVTCADVALSDR
NLLLSGSADRTVLVWDTRSTARGPVRCLHGHRDRVTCLLRSGAAVFAGGE
DGALVEWDWATGDRRDRYEGHAAGVSSVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf