mRNA_P-wetherbeei_contig53597.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: A0A076PYJ0_COMTE (Citrate synthase (unknown stereospecificity) n=1 Tax=Comamonas testosteroni TK102 TaxID=1392005 RepID=A0A076PYJ0_COMTE) HSP 1 Score: 117 bits (293), Expect = 4.830e-29 Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKE-------TPRSAFATGPLPCFGHPLY 528
TP+ + + + +LS+ ERA D A A + L+Q G + FGP ++ + D ++A ++ L + A ++AALV+SAEHELSAPTFA RICASTGAD++ACVAA ++ QSG MQVGG+++ E L+ A+ G E S F + LPCFGHPLY
Sbjct: 8 TPLKLLSMLTTSLSAFERAEDDMQTAGFA-ACRRLLQTLAGTAGVFGPRAQFSAPRDGEFMAQCVARGLGLGDRPDAVRAIDAALVMSAEHELSAPTFATRICASTGADLHACVAAAMLTQSGSMQVGGAVEVEALIDALPFGLEPEDALPLAAASGFKSNELPCFGHPLY 177
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: A0A5N7W8D2_COMSP (Citrate synthase (unknown stereospecificity) n=4 Tax=Comamonadaceae TaxID=80864 RepID=A0A5N7W8D2_COMSP) HSP 1 Score: 117 bits (293), Expect = 7.220e-28 Identity = 74/171 (43.27%), Postives = 104/171 (60.82%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKE-------TPRSAFATGPLPCFGHPLY 528
TP+ + + + +LS+ ERA D A A + L+Q G + FGP ++ + D ++A ++ L + A ++AALV+SAEHELSAPTFA RICASTGAD++ACVAA ++ QSG MQVGG+++ E L+ A+ G E S F + LPCFGHPLY
Sbjct: 175 TPLKLLSMLTTSLSAFERAEDDMQTAGFA-ACRRLLQTLAGTAGVFGPRAQFSAPRDGEFMAQCVARGLGLGDRPDAVRAIDAALVMSAEHELSAPTFATRICASTGADLHACVAAAMLTQSGSMQVGGAVEVEALIDALPFGLEPEDALPLAAASGFKSNELPCFGHPLY 344
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: A0A4D4JK71_9BURK (Citrate synthase (unknown stereospecificity) n=7 Tax=cellular organisms TaxID=131567 RepID=A0A4D4JK71_9BURK) HSP 1 Score: 114 bits (285), Expect = 4.470e-27 Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKE-------TPRSAFATGPLPCFGHPLY 528
TP+ + A + +LS+ ERA D + A A + L+Q G + FGP ++ D ++A ++ L + A ++AALV+SAEHELSAPTFA RICASTGAD++ACVA ++ QSGPMQVGG+++ E L+ A+ G S F LPCFGHPLY
Sbjct: 110 TPLKLLAMLTTSLSAFERAEDDVEAAGFA-ACRRLLQWLAGTAGVFGPEPRFSPPRDGEFVAQCVARGLGLGDRPDAVRAIDAALVMSAEHELSAPTFAARICASTGADLHACVATAMLTQSGPMQVGGAVEVEALIDALPCGLAPEDALPLAAASGFKGNELPCFGHPLY 279
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: UPI001A8C821A (citrate synthase n=1 Tax=Trinickia sp. DHG64 TaxID=2816356 RepID=UPI001A8C821A) HSP 1 Score: 114 bits (285), Expect = 6.030e-27 Identity = 66/133 (49.62%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 142 LIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKETPRS---AFATGPLPCFGHPLY 528
LIQ F GA+ GP YL + +A ++ L + + IL+AALVLSAE+EL+APTFA RICASTGAD+YACVA+ + QSGPMQVGG+ D E ++ A+ + + P S ++ G LPCF HPLY
Sbjct: 169 LIQTFCGAAGLIGPKRTYLPPNEGETVAACIARGLGRERDSEVIRILDAALVLSAENELAAPTFAARICASTGADLYACVASALQVQSGPMQVGGTFDVEIMLEALTRARGRPESRLAGYSRGGLPCFNHPLY 301
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: UPI000422700E (citrate synthase n=1 Tax=Ottowia thiooxydans TaxID=219182 RepID=UPI000422700E) HSP 1 Score: 111 bits (277), Expect = 1.090e-25 Identity = 74/162 (45.68%), Postives = 99/162 (61.11%), Query Frame = 1
Query: 52 MFAQMALALSSVERAGVDRD-LPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAAI--LNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKETPRSAFATGPLPCFGHPLY 528
+ A+ ALA++S+ER + L +AG LIQAF A+ + GP GD+ +A L L G + +AI LN ALVLSA+HELSAPTF RICASTG D+YACV A +MA GPMQ+GG+ D E+++++ P ++ PCFGHPLY
Sbjct: 173 LLARTALAMTSLERPSSETAYLGRTAGI--RLIQAFAAAAGYLGPRRAPEPQGDSEHVAAFLLRGLGGAGNDPSAINVLNTALVLSADHELSAPTFVARICASTGVDLYACVVAALMAHCGPMQMGGAADLEDMLQS-----GDPSPLVSSLDAPCFGHPLY 327
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: UPI001BBD3A84 (Citrate synthase n=1 Tax=Hydrogenophaga sp. TaxID=1904254 RepID=UPI001BBD3A84) HSP 1 Score: 111 bits (277), Expect = 1.210e-25 Identity = 70/171 (40.94%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQG-------KETPRSAFATGPLPCFGHPLY 528
TP+ + + + +LS+ E+A D A + L+Q G + FGP +Y + + +LA ++ L + A ++AALV+SAEHELSAPTFA RICASTGAD++ACVA ++ QSG MQVGG+++ E L+ A+ K S F + LPCF HPLY
Sbjct: 164 TPLRLLSMLTTSLSAFEQAEDDMQTAGPA-TCRRLLQTLAGTAGVFGPGSRYSAPHEGEFLAQCIARGLGLKKMPDAVQAIDAALVMSAEHELSAPTFAARICASTGADLHACVATAMLTQSGAMQVGGAVEVEALIDALPSRLEPEDALKRAAASGFMSNELPCFNHPLY 333
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: I2IMT2_9BURK (Citrate synthase (unknown stereospecificity) n=1 Tax=Burkholderia sp. Ch1-1 TaxID=243261 RepID=I2IMT2_9BURK) HSP 1 Score: 111 bits (277), Expect = 1.410e-25 Identity = 74/180 (41.11%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 RRTVVSTANAARKTPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGK---ETPRSAFATGPLPCFGHPLY 528
R T A A P+G + +S+ G D+ LIQ F GA+ FGP G Y D +A ++ LA +G ++AALVLSA++EL+APTFA RIC+STGAD+YACV++ + QSGPMQVGG+ D E + A+A + ET + ++ LPCF HPLY
Sbjct: 171 RCTAAHQAEAPDTPPLGWLTLLTYLISNSPSCGAATRNHDAVSTGILLIQIFSGAAGLFGPGGVYKPPRDGETVAACIARGLAREGDADVIRFVDAALVLSADNELAAPTFAARICSSTGADLYACVSSALAVQSGPMQVGGTQDVEIMFDALAGTRGAHETRPAGYSRAGLPCFNHPLY 350
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: UPI001A97D30A (hypothetical protein n=1 Tax=Bordetella petrii TaxID=94624 RepID=UPI001A97D30A) HSP 1 Score: 110 bits (274), Expect = 3.280e-25 Identity = 76/167 (45.51%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALA----PQGKNHAAILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKETPRSAFATGPLPCFGHPLY 528
+P+ + A MAL LS++E R ++G LI AF GAS +FGP Y ++A L P A +NAALVLSA++ELSAPTF RI +STG D++ACVAA +MAQ+GPMQ GG ID E + V RS TG +PCFGHPLY
Sbjct: 172 SPIRLLAMMALQLSALEADAAGRGDVRTSGV--RLISAFAGASGYFGPRRAYQRGEGQEFIAQRLLRGFGLSRQPGQDKLLASMNAALVLSADNELSAPTFCARITSSTGVDVHACVAAALMAQAGPMQAGGMIDLEQYLADVQAADGRARSY--TG-VPCFGHPLY 333
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: UPI001CB19B4B (citrate synthase n=1 Tax=Paraburkholderia caribensis TaxID=75105 RepID=UPI001CB19B4B) HSP 1 Score: 109 bits (272), Expect = 6.530e-25 Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 142 LIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALAPQGKNHAA-ILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVA---QGKETPRSAFATGPLPCFGHPLY 528
LIQAF GA+ GP +L+ + +A ++ L +G A +++AALVLSA++EL+APTFA RICASTGAD+YACVA+ + QSGPMQVGG++D E ++ A+ +++ + + LPCF HPLY
Sbjct: 206 LIQAFAGAAGLLGPGKAHLAVVNGETIAATIARGLGHEGNGDAIRLIDAALVLSADNELAAPTFAARICASTGADLYACVASALAVQSGPMQVGGTVDVEIMLEALVGDGASRDSRPAGYLRSGLPCFNHPLY 338
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Match: A0A7Z0MII7_9BURK (Citrate synthase (unknown stereospecificity) n=1 Tax=Alcaligenaceae bacterium TaxID=2021368 RepID=A0A7Z0MII7_9BURK) HSP 1 Score: 108 bits (270), Expect = 1.170e-24 Identity = 70/168 (41.67%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 40 TPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQAFVGASAHFGPSGKYLSHGDAGWLADHLSEALA----PQGKNHAAILNAALVLSAEHELSAPTFAVRICASTGADIYACVAAGIMAQSGPMQVGGSIDAENLMRAVAQGKETPRSAFATGP-LPCFGHPLY 528
+P+ A +A+ L+SVE G D+ A ++ AF G S + G G Y G+ ++A+ L + P+ + +LN ALVLS ++ELS PTF RI ASTGAD+Y+CV A IMAQ GPMQ+GG+ E ++AV Q +PR G +PCF HPLY
Sbjct: 170 SPLAALAHIAVELASVETVGGVSPHVDARTAGVCVLNAFAGVSGNLGARGVYQPQGENEYIAERLLKGYGLTRRPEQEKLLRLLNTALVLSVDNELSTPTFCARISASTGADLYSCVVAAIMAQGGPMQIGGASYLEAYLQAVLQ---SPRDVRHNGQDIPCFDHPLY 334 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53597.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53597.1.1 >prot_P-wetherbeei_contig53597.1.1 ID=prot_P-wetherbeei_contig53597.1.1|Name=mRNA_P-wetherbeei_contig53597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp RRTVVSTANAARKTPVGMFAQMALALSSVERAGVDRDLPDSAGAAKTLIQback to top mRNA from alignment at P-wetherbeei_contig53597:3..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53597.1.1 ID=mRNA_P-wetherbeei_contig53597.1.1|Name=mRNA_P-wetherbeei_contig53597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53597:3..530- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53597:3..530- >mRNA_P-wetherbeei_contig53597.1.1 ID=mRNA_P-wetherbeei_contig53597.1.1|Name=mRNA_P-wetherbeei_contig53597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig53597:3..530- (Phaeothamnion wetherbeei SAG_119_79)back to top |