mRNA_P-wetherbeei_contig124.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A835ZDT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.770e-15 Identity = 63/160 (39.38%), Postives = 72/160 (45.00%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDW--TKDR---KAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQRLDFVERSLFLWIR-GRWLYAHGDVGFEPTVTAVPGGVLD 1281
+RYSAYAYRL DYIM TTH + D+ KD+ KAW+QSL F D Y F GL QP A ++ G+ A L F AK+ A QRL FVERS FL GRWLY GD F P V G D
Sbjct: 58 SRYSAYAYRLPDYIMATTHPDHEDYKPAKDKAGAKAWQQSLLNFCDAYTFQGL-----QPGALELEDDGA-----------------------------------VAFLNFTAKVNALSQRLQFVERSKFLCGGDGRWLYVSGDADFTPEVLLESGQFAD 177
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A1P8KQL6_9PROT (Uncharacterized protein n=1 Tax=Poseidonibacter parvus TaxID=1850254 RepID=A0A1P8KQL6_9PROT) HSP 1 Score: 71.2 bits (173), Expect = 4.510e-11 Identity = 42/137 (30.66%), Postives = 63/137 (45.99%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQRLDFVERSLFLWIRGRWLYAHG 1230
+R+ A+A + A+YI++TTH+SNSD+T D KAWR+ ++ F D +F LDIL + G D + ++F+A L GQ F E+S FL + RW+Y G
Sbjct: 39 SRFCAFALKKAEYIINTTHKSNSDFTDDLKAWREDIELFCDNTKFISLDILEE------------------------------------------INGLDESFVSFKATLLQNGQDASFKEKSRFLKVENRWVYVDG 133
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A7S0HEU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEU9_9EUKA) HSP 1 Score: 74.3 bits (181), Expect = 5.930e-11 Identity = 51/149 (34.23%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 823 RYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPG--QRLDFVERS-LFLWIRGRWLYAHGDVGFEPTVTA 1260
RY+AYAYRL D+++DTT + +W DR AW++ L F D + +GL++ Q AGD + GAD + FRAKL G + LD +E S L G WLYA GDV +E T A
Sbjct: 153 RYTAYAYRLPDFLIDTTSPDHEEWETDRTAWKKDLLTFCDTFVCEGLEVGQQQ--------------------------AGDAAA---------VGGADAVQVPFRAKLVQKGAIKMLDLLETSTLVRGAAGGWLYAKGDVEYEATPEA 266
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A7S1H271_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H271_HEMAN) HSP 1 Score: 72.4 bits (176), Expect = 2.030e-10 Identity = 48/151 (31.79%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHL--TFRAKLGAPGQR----LDFVERSLFLWIRGRWLYAHGDVGFEPTV 1254
+RYSAYAYRL D+++ TTH++N DW D+ +WR+ L F D +EF GL++L + + K+ ++ + H+ TF +K+ + Q DF ERS FL W+Y GDV F+P V
Sbjct: 91 SRYSAYAYRLPDWVIGTTHKTNVDWRADQTSWRRELLGFCDGFEFLGLEVLEEDAGESDKEYF---------------------ITFLAKLRTLKQPTSTSKHVKQTF-SKIKSQHQNDALNADFKERSRFLLEDEGWMYVEGDVNFDPQV 219
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A7S0VZB7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VZB7_9CRYP) HSP 1 Score: 63.2 bits (152), Expect = 3.790e-8 Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQ 981
+RYSAYAYRL D+++ TTH N D+ D+ AWR+ L F D ++F GL++L ++
Sbjct: 24 SRYSAYAYRLPDWVIGTTHNDNVDYRADKAAWRRELLGFCDGFDFLGLEVLEEE 77
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A2N6G509_9PROT (Uncharacterized protein n=1 Tax=Arcobacter sp. TaxID=1872629 RepID=A0A2N6G509_9PROT) HSP 1 Score: 62.0 bits (149), Expect = 7.960e-8 Identity = 36/138 (26.09%), Postives = 60/138 (43.48%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQRLDFVERSLFLWIRGRWLYAHGD 1233
+R++A+ DYI++TTHE N ++++D+ WR+ ++ + +F+ L+I+ G D A++TFR L G + F ERS FL I G+WLY G+
Sbjct: 39 SRFTAFVVGNIDYIINTTHEDNIEYSRDKSKWREDIEDVVNSTDFNTLEIIE------------------------------------------FVDGVDEAYVTFRLGLKQKGLDVSFTERSKFLKIDGKWLYRSGE 134
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A7S3BIJ8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BIJ8_9EUKA) HSP 1 Score: 60.8 bits (146), Expect = 1.790e-7 Identity = 42/143 (29.37%), Postives = 59/143 (41.26%), Query Frame = 1
Query: 823 RYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQR--LDFVERSLFLWIRGRWLYAHGDVGFE 1245
RY+A+ YRL D++M TT S+W D AW++S+ F D +F L ++ +Q +A D A + FRA G +D VERS F+ G WLYA G V +E
Sbjct: 27 RYTAFCYRLPDFLMSTTDPEGSEWQPDGAAWKKSMLGFMDNLDFQKLRVVDEQLGSAP----------------------------------------DEASVHFRATFVQKGSINIVDAVERSQFVRRDGHWLYASGVVEYE 129
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A2G1DHE5_9PROT (Uncharacterized protein n=3 Tax=Arcobacteraceae TaxID=2808963 RepID=A0A2G1DHE5_9PROT) HSP 1 Score: 60.5 bits (145), Expect = 2.620e-7 Identity = 38/137 (27.74%), Postives = 58/137 (42.34%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQRLDFVERSLFLWIRGRWLYAHG 1230
+R+SAYA A+YI++TTH+ N ++T +R+ W + F + +F GL IL KD G + ++F+AKL G F E+S FL + G+W Y G
Sbjct: 39 SRFSAYALGYANYIIETTHKDNCEFTHNRQTWLSDINNFCEYTDFQGLTILD------FKD------------------------------------GNKESFVSFKAKLSQNGLDASFTEKSRFLKVDGKWYYIDG 133
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: L1IZC6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IZC6_GUITC) HSP 1 Score: 62.8 bits (151), Expect = 2.660e-7 Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQ 981
+RYSAYAYRL +IMD+TH +N DW R WR L F D ++F L+IL ++
Sbjct: 114 SRYSAYAYRLPTWIMDSTHSTNPDWRSQRNKWRNELLGFCDGFDFVRLEILKEE 167
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Match: A0A4V1LQU6_9PROT (Uncharacterized protein n=2 Tax=Halarcobacter ebronensis TaxID=1462615 RepID=A0A4V1LQU6_9PROT) HSP 1 Score: 60.5 bits (145), Expect = 2.680e-7 Identity = 38/138 (27.54%), Postives = 57/138 (41.30%), Query Frame = 1
Query: 820 NRYSAYAYRLADYIMDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGSGGNDGGAARGSSDAGAGDGVSGXXXXXXXXXXGADRAHLTFRAKLGAPGQRLDFVERSLFLWIRGRWLYAHGD 1233
+RYSAYA +DYI++TTH N D+T D +W++ + F + EF GL+IL G + A +TF+A L F+E+S F+ + WLY G+
Sbjct: 39 SRYSAYAASNSDYIINTTHRDNKDYTTDINSWKKQIHDFFNHTEFKGLEILE------------------------------------------FIDGDNEAFVTFKAVLFQGAIDTSFIEKSKFVKVNNMWLYHSGE 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig124.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig124.1.1 >prot_P-wetherbeei_contig124.1.1 ID=prot_P-wetherbeei_contig124.1.1|Name=mRNA_P-wetherbeei_contig124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp MDTTHESNSDWTKDRKAWRQSLQRFSDIYEFDGLDILPDQPPAATKDESGback to top mRNA from alignment at P-wetherbeei_contig124:1238..3508- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig124.1.1 ID=mRNA_P-wetherbeei_contig124.1.1|Name=mRNA_P-wetherbeei_contig124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2271bp|location=Sequence derived from alignment at P-wetherbeei_contig124:1238..3508- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig124:1238..3508- >mRNA_P-wetherbeei_contig124.1.1 ID=mRNA_P-wetherbeei_contig124.1.1|Name=mRNA_P-wetherbeei_contig124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig124:1238..3508- (Phaeothamnion wetherbeei SAG_119_79)back to top |