mRNA_P-wetherbeei_contig5357.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A6H5KVP7_9PHAE (Dynamin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVP7_9PHAE) HSP 1 Score: 218 bits (554), Expect = 4.340e-66 Identity = 102/129 (79.07%), Postives = 118/129 (91.47%), Query Frame = 1
Query: 4 IDGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGI 390
+D K+Q+EIL +C++LHA F+QP ND+ GPLEK +GGY++TK+PFVF+LGNHSSGKSSFINYVLGR+IQTAGVAPTDDSFTIIAPGP+D+DQDGPALVGDPDMGFSGLR FGPTL HHT LKVRSGI
Sbjct: 47 VDSKVQAEILEKCDDLHASFIQPLNDKTAGPLEKLQTGGYQSTKMPFVFVLGNHSSGKSSFINYVLGRNIQTAGVAPTDDSFTIIAPGPSDLDQDGPALVGDPDMGFSGLRQFGPTLTHHTELKVRSGI 175
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A836CHQ6_9STRA (Dynamin_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ6_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.780e-65 Identity = 100/129 (77.52%), Postives = 116/129 (89.92%), Query Frame = 1
Query: 4 IDGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGI 390
+D LQ+EI+ +CE+L +KF+QP NDRL GPL+KS+SGGY+TTKLPFVF+LGNHSSGKSSFIN+ +GR+IQT GVAPTDDSFTIIAPGP D+DQDGPAL+GDPDMGFSGLR FGP LIHHTCLKVR I
Sbjct: 25 LDTSLQAEIMSKCEDLSSKFIQPLNDRLRGPLDKSSSGGYRTTKLPFVFVLGNHSSGKSSFINHCIGRTIQTTGVAPTDDSFTIIAPGPKDIDQDGPALIGDPDMGFSGLRQFGPALIHHTCLKVRRDI 153
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A7S2WTV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTV8_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.680e-55 Identity = 90/119 (75.63%), Postives = 101/119 (84.87%), Query Frame = 1
Query: 25 EILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVR 381
+IL RCE LH K +QP NDRL GPLE+ + +KTT LPFV LLGNHSSGKSSF+N+VLGRSIQTAGVAPTDDSFTI+APG D+DQDGPALVGDPDMGF+GLR FGP LIHH LK+R
Sbjct: 34 QILERCEALHTK-IQPLNDRLSGPLERQS---HKTTALPFVLLLGNHSSGKSSFVNHVLGRSIQTAGVAPTDDSFTIVAPGSKDIDQDGPALVGDPDMGFTGLRHFGPALIHHMRLKIR 148
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A7S2EBB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EBB6_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.340e-52 Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 1
Query: 7 DGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGIRS 396
+GK+Q EIL +C ELH+ + P N++L GPL K + G T LPFV L+GNHSSGKSSF+NYVLGR +QTAGVAPTDD FT+IAPGP+D+DQDGPALVGDPDMGF+ LR FGPTLIHHT LKVRS I++
Sbjct: 106 EGKIQREILDKCSELHSSLM-PMNEKLRGPLAKHSDRG---TSLPFVLLVGNHSSGKSSFVNYVLGRKVQTAGVAPTDDCFTVIAPGPSDVDQDGPALVGDPDMGFANLRQFGPTLIHHTQLKVRSDIQN 231
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A7S2VHD5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHD5_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.420e-52 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 16 LQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGIRS 396
+Q IL +C ELH+ + P N L GPL K++ G T LPFVFL+GNHSSGKSSFINYVLGRS+QTAGVAPTDD FT+IAPGP D+DQDGPALVGDPD+GF GLR FGPTLIHHT LKVR GIR+
Sbjct: 80 VQQSILNQCSELHSS-IMPFNTSLQGPLAKNSDKG---TSLPFVFLVGNHSSGKSSFINYVLGRSVQTAGVAPTDDCFTVIAPGPKDVDQDGPALVGDPDIGFEGLRQFGPTLIHHTQLKVRDGIRN 202
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A7S3V588_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V588_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.010e-51 Identity = 89/127 (70.08%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 4 IDGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRS 384
I +QS+IL C LH + + P N+++ GPL K++ K T LPFVFL+GNHSSGKSSFINYVLGRSIQTAGVAPTDD FT++APGP D DQDGPAL+GDPDMGFSGLR FGPTLIHHT LKVR+
Sbjct: 78 ISPSVQSQILDECSSLH-RSIMPLNEKIRGPLAKNSD---KNTALPFVFLVGNHSSGKSSFINYVLGRSIQTAGVAPTDDCFTVVAPGPDDTDQDGPALIGDPDMGFSGLRQFGPTLIHHTQLKVRA 200
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A7S2UYE7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYE7_9STRA) HSP 1 Score: 178 bits (451), Expect = 8.250e-51 Identity = 94/131 (71.76%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 4 IDGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGY--KTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGI 390
+ + Q IL RC ELHA +QP N+ GPL G +TTKLPFVFLLGNHSSGKSSFINYVL R IQTAGVAPTDDSFTII+PGP D+DQDGPALVGDPDMGFSGLR FGP LIHH LKVRSG+
Sbjct: 46 LSEETQKTILKRCGELHAT-LQPLNEGTRGPLTGGGGMGLDGRTTKLPFVFLLGNHSSGKSSFINYVLQRKIQTAGVAPTDDSFTIISPGPQDIDQDGPALVGDPDMGFSGLRHFGPALIHHIQLKVRSGV 175
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: A0A4D9CUF5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF5_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.570e-50 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 1
Query: 19 QSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGI 390
Q +L RC+EL + ++QP NDRL GPLEK + K LPFVFLLGNHSSGKSSF+NYV R IQTAGVAPTDDSFTIIAPGPAD+DQDGP+ +GDPDMGF+GLR FGP LIHHT LK+R+G+
Sbjct: 58 QRRVLQRCDELQS-YLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPADIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGL 177
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: K0S9T5_THAOC (Dynamin_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9T5_THAOC) HSP 1 Score: 176 bits (447), Expect = 4.850e-50 Identity = 87/126 (69.05%), Postives = 101/126 (80.16%), Query Frame = 1
Query: 19 QSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGIRS 396
Q IL +C LH+ + P N L GPL K++ G T LPFVFL+GNHSSGKSSFIN++LGR +QTAGVAPTDD FT+IAPGPAD+DQDGPALVGDPD+GF GLR FGPTLIHHT LKVR G+R+
Sbjct: 77 QQAILSKCSHLHSS-IMPMNASLGGPLAKNSDRG---TSLPFVFLVGNHSSGKSSFINFILGRPVQTAGVAPTDDCFTVIAPGPADVDQDGPALVGDPDIGFEGLRQFGPTLIHHTQLKVREGVRT 198
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Match: W7TJF7_9STRA (Rme1-like gtpase atpase without a c-terminal eh domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJF7_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.510e-49 Identity = 87/124 (70.16%), Postives = 101/124 (81.45%), Query Frame = 1
Query: 19 QSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFLLGNHSSGKSSFINYVLGRSIQTAGVAPTDDSFTIIAPGPADMDQDGPALVGDPDMGFSGLRGFGPTLIHHTCLKVRSGI 390
Q +L RC+EL + ++QP NDRL GPLEK + K LPFVFLLGNHSSGKSSF+NYV R IQTAGVAPTDDSFTIIAPGP D+DQDGP+ +GDPDMGF+GLR FGP LIHHT LK+R+G+
Sbjct: 87 QRRVLQRCDELQS-YLQPINDRLRGPLEKCSD---KAPLLPFVFLLGNHSSGKSSFVNYVCNRPIQTAGVAPTDDSFTIIAPGPTDIDQDGPSTIGDPDMGFAGLRHFGPDLIHHTQLKIRAGL 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5357.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5357.3.1 >prot_P-wetherbeei_contig5357.3.1 ID=prot_P-wetherbeei_contig5357.3.1|Name=mRNA_P-wetherbeei_contig5357.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp MIDGKLQSEILGRCEELHAKFVQPCNDRLYGPLEKSTSGGYKTTKLPFVFback to top mRNA from alignment at P-wetherbeei_contig5357:3290..3685+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5357.3.1 ID=mRNA_P-wetherbeei_contig5357.3.1|Name=mRNA_P-wetherbeei_contig5357.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig5357:3290..3685+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5357:3290..3685+ >mRNA_P-wetherbeei_contig5357.3.1 ID=mRNA_P-wetherbeei_contig5357.3.1|Name=mRNA_P-wetherbeei_contig5357.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig5357:3290..3685+ (Phaeothamnion wetherbeei SAG_119_79)back to top |