prot_P-wetherbeei_contig53539.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53539.1.1
Unique Nameprot_P-wetherbeei_contig53539.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length113
Homology
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BLAST of mRNA_P-wetherbeei_contig53539.1.1 vs. uniprot
Match: A0A7W0X146_9PROT (EF-hand domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W0X146_9PROT)

HSP 1 Score: 61.2 bits (147), Expect = 6.010e-10
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 0 
Query:   27 LLVASLAPLAYADDRGDYNARAAASLAELFRTLDRNTDGRLTRAEVTGDLNMEPRFDDXXXXXXXXXXXQELEDYVVLRYGMARRP 112
            +L+A     A ADD+ +Y+ RAAA  A LF++LDR+ DG +TR E  G+LN  PRFD             EL+ Y+  +YG+   P
Sbjct:   13 VLLAVCVSSAAADDKLEYDRRAAARDAMLFQSLDRDADGTVTRLESQGNLNFGPRFDAMDINRDGVVTTAELQRYIEQQYGVRPNP 98
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BLAST of mRNA_P-wetherbeei_contig53539.1.1 vs. uniprot
Match: A0A1F4D3M7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4D3M7_9PROT)

HSP 1 Score: 60.5 bits (145), Expect = 1.520e-9
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:   23 TWVCLLVASLAPLAYADDRGDYNARAAASLAELFRTLDRNTDGRLTRAEVTGDLNMEPRFDDXXXXXXXXXXXQELEDYVVLRYGMA 109
            T V LL+A ++    ADDR ++N RAAA+    FR LD N DGRLT+ E   DLN  PRF D XXXXXXXXXX E+  Y+   YG++
Sbjct:   20 TIVTLLLAVVSWSVTADDRAEFNRRAAAADMTAFRQLDLNGDGRLTQDEAKHDLNFGPRFGDIXXXXXXXXXXXEMRRYIEQTYGVS 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53539.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7W0X146_9PROT6.010e-1040.70EF-hand domain-containing protein n=1 Tax=Betaprot... [more]
A0A1F4D3M7_9PROT1.520e-952.87Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 53..71
e-value: 0.044
score: 13.3
coord: 82..99
e-value: 8.2E-5
score: 21.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 82..108
score: 8.878534
NoneNo IPR availableGENE3D1.10.238.10coord: 40..105
e-value: 4.8E-11
score: 44.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 86..98
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 49..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53539contigP-wetherbeei_contig53539:9..347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53539.1.1mRNA_P-wetherbeei_contig53539.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53539 9..347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53539.1.1 ID=prot_P-wetherbeei_contig53539.1.1|Name=mRNA_P-wetherbeei_contig53539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
LPSIGAGWNPIVDKGACMSRRGTWVCLLVASLAPLAYADDRGDYNARAAA
SLAELFRTLDRNTDGRLTRAEVTGDLNMEPRFDDLDGNRDGVITRQELED
YVVLRYGMARRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair