mRNA_P-wetherbeei_contig5350.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5350.1.1
Unique NamemRNA_P-wetherbeei_contig5350.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI00106D4919 (uncharacterized protein LOC114534776 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D4919)

HSP 1 Score: 115 bits (288), Expect = 1.070e-29
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMAT-AQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P  RP Q        QRY YNGH RLH +KFQ V  PNG++++M+G V G+RH++ +LA SNL   +   A + + R   +YGD AYP+ +H+    R A  TP     N +MS  R+ VEW FG
Sbjct:   45 FIDGTVRPLCRPGQH-------QRYVYNGHKRLHSIKFQSVTLPNGLIANMFGPVEGKRHDAGMLADSNLLASLEQRAYSTDGRAMCLYGDPAYPLRAHLQTPFREAALTPHMMEFNKSMSTVRVTVEWAFG 169          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: A0A2B4R9R9_STYPI (DDE Tnp4 domain-containing protein n=2 Tax=Astrocoeniina TaxID=123757 RepID=A0A2B4R9R9_STYPI)

HSP 1 Score: 114 bits (286), Expect = 2.310e-29
Identity = 59/134 (44.03%), Postives = 76/134 (56.72%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNL---NNRMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P S+P Q        QR  YNGH R+HG+KFQ V  PNGI+ +MYG + GRRH++ +LA SNL     R A +     R   +YGD AYP+  H+    R  + TP     N AMS  R+  EW FG
Sbjct:   64 FIDGTVRPISKPGQN-------QRIVYNGHKRVHGVKFQSVALPNGIIGNMYGPIEGRRHDATMLADSNLLQDMQRYAFSPGPAGRPLCVYGDHAYPLRVHLQTPFRNMILTPQMVNFNKAMSSVRVSAEWLFG 190          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI00077A0F01 (uncharacterized protein LOC107341469 n=2 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A0F01)

HSP 1 Score: 115 bits (288), Expect = 2.780e-29
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNN---RMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P  +P Q        QR  YNGH R+H +KFQ V+ PNG+++++YG V G+RH+S LLA S L N   R + A  G P    IYGD AYP+  H+    +GA  TP ++  N +MS+ R+ VEW FG
Sbjct:   62 FIDGTVRPLCKPGQN-------QRALYNGHKRVHSIKFQSVVAPNGLIANLYGPVEGKRHDSGLLADSGLLNDLSRYSFAPDGTP--LCIYGDPAYPLRVHLQGPFKGAALTPLEQHFNKSMSQVRVAVEWVFG 186          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: A0A8B7DWL9_HYDVU (uncharacterized protein LOC100198797 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DWL9_HYDVU)

HSP 1 Score: 120 bits (301), Expect = 4.540e-29
Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMATAQ---AGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P +RP +        QR  YNGH ++H LKF  V+ PNG++++++G V G++H+S +LA SNL N +       AGNP    IYGD AYP+  H+  G +GA+ +P Q+  N  MSE R+ VEW FG
Sbjct:  112 FIDGTVRPITRPGKY-------QRVLYNGHKKVHSLKFLSVVAPNGLIANLFGPVEGKKHDSEMLADSNLLNLLGQHSFDTAGNP--LCIYGDPAYPLRVHLQTGFKGAMLSPQQKIWNKRMSEVRVSVEWLFG 236          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI000F558385 (uncharacterized protein LOC113685269 n=2 Tax=Astrocoeniina TaxID=123757 RepID=UPI000F558385)

HSP 1 Score: 115 bits (287), Expect = 1.600e-28
Identity = 61/134 (45.52%), Postives = 79/134 (58.96%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNN---RMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P  RP +       LQR  YNGH R+H LKFQ    PNG++++MYG V GR+H++ +LA S L N   R A +  G P    +YGD AYP+  H+    R AV TP  +A N +MS  R  VEW FG
Sbjct:  129 FIDGTVRPICRPGE-------LQRVVYNGHKRVHALKFQSFTLPNGMIANMYGPVEGRKHDAGMLADSGLLNDLQRFAFSTTGQPMC--LYGDPAYPLRIHLQAPFRNAVLTPAMQAFNSSMSAVRESVEWLFG 253          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI001CF480ED (uncharacterized protein LOC114948638 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF480ED)

HSP 1 Score: 115 bits (289), Expect = 1.780e-28
Identity = 57/132 (43.18%), Postives = 79/132 (59.85%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMATAQAGNPRQ-YKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P  RP          QR  YNGH R+H +KFQ V+ PNG++++++G V GRRH+S +LA S L   + T    +  Q   +YGD AYP+  H+    +GA  TP Q A N +MS+ R+ VEW FG
Sbjct:  174 FIDGTVRPVCRPGLN-------QRVLYNGHKRIHAIKFQSVVAPNGLIANLFGPVEGRRHDSGMLAMSGLLPMLETYSVSSTGQPLCLYGDPAYPLRVHLQGPFKGAALTPQQEAFNASMSKVRVSVEWVFG 298          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI00077AB6ED (uncharacterized protein LOC107339985 isoform X1 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AB6ED)

HSP 1 Score: 115 bits (288), Expect = 2.490e-28
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNN---RMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+ P  +P Q        QR  YNGH R+H +KFQ V+ PNG+++++YG V G+RH+S LLA S L N   R + A  G P    IYGD AYP+  H+    +GA  TP ++  N +MS+ R+ VEW FG
Sbjct:  174 FIDGTVRPLCKPGQN-------QRALYNGHKRVHSIKFQSVVAPNGLIANLYGPVEGKRHDSGLLADSGLLNDLSRYSFAPDGTP--LCIYGDPAYPLRVHLQGPFKGAALTPLEQHFNKSMSQVRVAVEWVFG 298          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI00106D38F2 (uncharacterized protein LOC114539259 n=4 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D38F2)

HSP 1 Score: 115 bits (287), Expect = 3.590e-28
Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMAT---AQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+    RP +       LQR  YNGH R+H +KFQ V  PNG++  +YG + GRRH+S +LA+S L N++ T    + G P    +YGD AYP+  H+    R AV T P +  N +MS+ RI VEW FG
Sbjct:  174 FIDGTVRAICRPGK-------LQRAVYNGHKRVHAIKFQSVALPNGMIGHLYGPMEGRRHDSFMLAQSGLLNQLQTFCFTEEGQP--LCLYGDPAYPLRVHLQAPFRNAVLTQPMKEFNKSMSKVRIAVEWLFG 298          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI001CF1F378 (protein ALP1-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF1F378)

HSP 1 Score: 114 bits (286), Expect = 3.760e-28
Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGTL P  RP Q        QR  ++GH R HGLKFQ V+ PNG++++++G V GR H++ +L  SNL  R+    A  P  + +YGD AYP+  HI    RGA  TP Q+  N  MS+ R  VEW FG
Sbjct:  159 FIDGTLRPCCRPIQN-------QRILFSGHKRTHGLKFQSVVCPNGLIANLFGPVAGRHHDAFMLHESNLIPRLQAKFAALPI-FTLYGDPAYPLCQHILGPYRGAQLTPDQQLFNERMSKVRESVEWSFG 281          
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Match: UPI001F03C744 (uncharacterized protein LOC124456663 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03C744)

HSP 1 Score: 112 bits (279), Expect = 4.640e-28
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 1
Query:    1 FVDGTLMPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVVGRRHESHLLARSNLNNRMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGAVFTPPQRACNLAMSEARIFVEWRFG 393
            F+DGT+    RP ++       QR  YNGH R+H LKFQ V  PNGI+++M+G + GRRH+S +LA S L N +      N +   +YGD AYP+  H+    R    T P    N +MS  RI VEW FG
Sbjct:   51 FIDGTVRQICRPGEM-------QRIVYNGHKRVHALKFQSVTLPNGIIANMFGPIEGRRHDSAMLAESGLLNDLEEFAHWNGKPMCLYGDPAYPLRIHLQAPYRNLPLTMPMEEFNKSMSAVRISVEWIFG 174          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5350.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00106D49191.070e-2943.94uncharacterized protein LOC114534776 n=2 Tax=Dendr... [more]
A0A2B4R9R9_STYPI2.310e-2944.03DDE Tnp4 domain-containing protein n=2 Tax=Astroco... [more]
UPI00077A0F012.780e-2944.78uncharacterized protein LOC107341469 n=2 Tax=Acrop... [more]
A0A8B7DWL9_HYDVU4.540e-2944.03uncharacterized protein LOC100198797 n=1 Tax=Hydra... [more]
UPI000F5583851.600e-2845.52uncharacterized protein LOC113685269 n=2 Tax=Astro... [more]
UPI001CF480ED1.780e-2843.18uncharacterized protein LOC114948638 n=1 Tax=Acrop... [more]
UPI00077AB6ED2.490e-2844.78uncharacterized protein LOC107339985 isoform X1 n=... [more]
UPI00106D38F23.590e-2844.03uncharacterized protein LOC114539259 n=4 Tax=Dendr... [more]
UPI001CF1F3783.760e-2845.04protein ALP1-like isoform X1 n=3 Tax=Acropora TaxI... [more]
UPI001F03C7444.640e-2842.75uncharacterized protein LOC124456663 n=1 Tax=Xenia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5350contigP-wetherbeei_contig5350:559..1074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size393
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.47e-23
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size375
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186800.247869-CDS-P-wetherbeei_contig5350:558..7511683186800.247869-CDS-P-wetherbeei_contig5350:558..751Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5350 559..751 -
1683186800.2720907-CDS-P-wetherbeei_contig5350:874..10561683186800.2720907-CDS-P-wetherbeei_contig5350:874..1056Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5350 875..1056 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186800.2814183-UTR-P-wetherbeei_contig5350:1056..10741683186800.2814183-UTR-P-wetherbeei_contig5350:1056..1074Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5350 1057..1074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5350.1.1prot_P-wetherbeei_contig5350.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5350 559..1056 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5350.1.1

>prot_P-wetherbeei_contig5350.1.1 ID=prot_P-wetherbeei_contig5350.1.1|Name=mRNA_P-wetherbeei_contig5350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MPTSRPSQVEGAPADLQRYCYNGHHRLHGLKFQGVMNPNGIVSDMYGSVV
GRRHESHLLARSNLNNRMATAQAGNPRQYKIYGDAAYPMLSHISRGCRGA
VFTPPQRACNLAMSEARIFVEWRFG
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mRNA from alignment at P-wetherbeei_contig5350:559..1074-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5350.1.1 ID=mRNA_P-wetherbeei_contig5350.1.1|Name=mRNA_P-wetherbeei_contig5350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig5350:559..1074- (Phaeothamnion wetherbeei SAG_119_79)
TTTGTTGACGGCACGCTGATGCCGACGTCCCGGCCCTCTCAGGTGGAGGG GGCGCCGGCAGACCTGCAGCGGTACTGCTACAACGGACACCACCGCTTGC ACGGTCTCAAGTTTCAAGGGGTTATGAACCCAAACGGAATCGTCTCCGAC ATGTACGGGTCGGTTGTCGGGCGGCGGCACGAAAGCCACCTCCTGGCAAG GTGCTCTTTGACAAGGGGGCGGGGGGTCACTGCGGCGCCGCAAGGTGCTC CTTATTCCTGATTTCTGAATTTCCTTTGCATTGGACACTGGGTTCGCCCC CCACCGATCTGTTGTTTTGTCAGGAGCAACCTGAACAACCGCATGGCGAC GGCGCAGGCTGGGAACCCCCGTCAATACAAGATTTACGGCGATGCAGCGT ACCCAATGCTGTCGCACATTAGCCGGGGGTGTCGCGGCGCCGTCTTCACA CCACCTCAACGCGCGTGCAACCTGGCGATGTCAGAGGCGAGGATTTTTGT GGAGTGGCGTTTTGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5350:559..1074-

>mRNA_P-wetherbeei_contig5350.1.1 ID=mRNA_P-wetherbeei_contig5350.1.1|Name=mRNA_P-wetherbeei_contig5350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig5350:559..1074- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGACGTCCCGGCCCTCTCAGGTGGAGGGGGCGCCGGCAGACCTGCA
GCGGTACTGCTACAACGGACACCACCGCTTGCACGGTCTCAAGTTTCAAG
GGGTTATGAACCCAAACGGAATCGTCTCCGACATGTACGGGTCGGTTGTC
GGGCGGCGGCACGAAAGCCACCTCCTGGCAAGGAGCAACCTGAACAACCG
CATGGCGACGGCGCAGGCTGGGAACCCCCGTCAATACAAGATTTACGGCG
ATGCAGCGTACCCAATGCTGTCGCACATTAGCCGGGGGTGTCGCGGCGCC
GTCTTCACACCACCTCAACGCGCGTGCAACCTGGCGATGTCAGAGGCGAG
GATTTTTGTGGAGTGGCGTTTTGGA
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