mRNA_P-wetherbeei_contig535.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A7S3TX12_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TX12_9SPIT) HSP 1 Score: 80.9 bits (198), Expect = 2.710e-14 Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 2
Query: 296 FQITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGEL-FGYDDSQIDQVSKGRAVSFGRVKVPAG---MFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRAS 787
++ ++R L++++SGQPAG+I +GLW AP V TF L + L G+ +D S + +++K +A+ G ++ G + R + APP + D RHD GL+SV RGG SF F +T P LD + +V+GQV S
Sbjct: 10 YETSERVILELSLSGQPAGSIEVGLWRDQAPGSVDTFVKLAQGRLAPSSGDSPASFDRSSLIRIAKDKAIVLGALRQVGGQTQLVRGQTRPVMIPVAPPLNKDSNLVRHDAAGLLSVRRGGGSFAFTITPR-------------------PNLDLDRDEIVIGQVLTS 158
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A7S4JBR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JBR0_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 5.600e-10 Identity = 47/177 (26.55%), Postives = 76/177 (42.94%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPA-----------GMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKK 796
Q+T R L VA+ P ++ +GL+G AAP+ V F LC + G+ Y S + ++ + R + G + + G R + +++A +DD HDRPGLVS+ +GG +F F++T A LD N+V+G+ K
Sbjct: 17 QVTSRARLRVAIGDAPPQSLTVGLYGSAAPKSVALFEGLCAGTV----GKGLTYTGSSVSRIERDRLIVGGSLAAGSTRSKDTSIDSTGYVRSKMVNRADEYA---NDDANTLSHDRPGLVSMRKGGGAFEFVLTPAANPA-------------------LDATNIVIGEALGGDDK 167
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: B8ACM2_ORYSI (Peptidyl-prolyl cis-trans isomerase n=10 Tax=Oryza TaxID=4527 RepID=B8ACM2_ORYSI) HSP 1 Score: 58.2 bits (139), Expect = 4.230e-6 Identity = 47/173 (27.17%), Postives = 70/173 (40.46%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKKKRNAEEK 817
++T +C DV V G+PAG IVIGL+G P+ V F ALC D + +GY ++ K + G + G R+ + D D+ +H PG++S+ G Q N PW LD+ +VV G V +N E +
Sbjct: 70 KVTSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGD------KGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFD------DENFTLKHTGPGVLSMANAGPD----TNGSQFFICNVKT----------PW--LDNRHVVFGHVLEGMDVVKNLESQ 214
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A0M0JC37_9EUKA (Peptidyl-prolyl cis-trans isomerase cyp20-chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC37_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 7.360e-6 Identity = 52/172 (30.23%), Postives = 72/172 (41.86%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIV--IGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFG----------RVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 778
++T AL +AV A V I L+G AP V TF +C D +PG Y + I +V + R + G R G R ++ + F + D RHDRPG VS+ +GG FR + A A N R LD+ N+V+GQV
Sbjct: 20 RVTAEAALTIAVGTTDAARRVLPIALFGDEAPGSVATFRGVC--DGTLPGQAGVTYRGTTISRVERDRVIQAGVASGSGQDVERSIDSTGYVRSVYVSRADAFK---NSDTNELRHDRPGRVSMQKGGGDFRLTI----APAEN---------------RALDETNIVIGQV 167
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A2E8AYF3_9PLAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8AYF3_9PLAN) HSP 1 Score: 56.6 bits (135), Expect = 9.410e-6 Identity = 45/167 (26.95%), Postives = 73/167 (43.71%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVP-GGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRA---AKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASF---RFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 778
Q+T++ D+ + G+PAG IV+GL+G P+ V F ALC + G+ Y S +V + G + G + +K EDF+ RH++PGL+S+ G + +F +T + PW LD ++V+ GQV
Sbjct: 34 QVTNQVFFDLTIDGEPAGRIVMGLYGNVVPKTVENFRALCTGEKGKGRSGKALHYKGSSFHRVIPNFMIQGGDFTIGNGTGGESIYGSKFNDEDFS---------LRHNQPGLLSMANAGPNTNNSQFFITTVKT-----------------PW--LDGKHVIFGQV 172
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A835AL51_9POAL (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835AL51_9POAL) HSP 1 Score: 57.0 bits (136), Expect = 1.160e-5 Identity = 34/103 (33.01%), Postives = 52/103 (50.49%), Query Frame = 2
Query: 266 AVAPPPAIDAFQ--ITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCR------NDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAA 550
A A A++ Q +T +C DV V G+PAG IVIGL+G PE V F ALC N + + G + +GY ++ K + G + G +R+++
Sbjct: 59 AAAAEGAVEELQAKVTSKCFFDVEVGGEPAGRIVIGLFGEVVPETVENFRALCTGAYVTANRVRISGEKGYGYKGCSFHRIIKDFMIQGGDFQENNGEYRKSS 161
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: C5XHY3_SORBI (Peptidyl-prolyl cis-trans isomerase n=8 Tax=Andropogoneae TaxID=147429 RepID=C5XHY3_SORBI) HSP 1 Score: 56.2 bits (134), Expect = 1.960e-5 Identity = 45/160 (28.12%), Postives = 68/160 (42.50%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 778
++T +C DV V G+PAG IVIGL+G P+ V F ALC G + +GY ++ K + G + G R+ + D D+ +H PG++S+ G + T G + PW LD+ +VV G V
Sbjct: 74 KVTTKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCT------GEKGYGYKGCSFHRIIKDFMIQGGDFQENNGTGGRSIYGESFD------DENFTLKHVGPGVLSMANAGPN-----TNGSQFFICTVKT---------PW--LDNRHVVFGHV 205
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A6U0AUY4_9CHLO (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0AUY4_9CHLO) HSP 1 Score: 56.2 bits (134), Expect = 2.270e-5 Identity = 49/178 (27.53%), Postives = 75/178 (42.13%), Query Frame = 2
Query: 281 PAIDAFQITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKG---RAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASF---RFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKK 796
P + ++T++ DV++ G+PAG IVIGL+G+ AP+ V F AL G + +GY +S +V G + F G K + E FA P H PG++S+ G + +F +T +N +FG GLD + A G K
Sbjct: 88 PLLCVLEVTNKVYFDVSIGGEPAGRIVIGLFGKDAPKTVENFRALAT------GEKGYGYANSIFHRVIPGFMLQGGDFTNFNGTGGRSIYGNKFEDETFAIP---------HVGPGVLSMANAGPNTNGSQFFITVAPTPWLNGRHV-----VFGNVVEGLDVVRAIEANPTARGDK 245
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: A0A059DDY2_EUCGR (Peptidyl-prolyl cis-trans isomerase n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059DDY2_EUCGR) HSP 1 Score: 56.2 bits (134), Expect = 2.350e-5 Identity = 48/163 (29.45%), Postives = 70/163 (42.94%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVS---FGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQV 778
++T++C DV + G+PAG IVIGL+G P+ V F ALC G + FGY ++ K + F R G + + E+FA +H PG++S+ G S T G + PW LD+ +VV GQV
Sbjct: 94 KVTNKCFFDVEIGGEPAGRIVIGLFGDDVPKTVENFRALCT------GEKGFGYKGCSFHRIIKDFMIQGGDFTRGNGTGGKSIYGSTFEDENFA---------LKHVGPGVLSMANAGPS-----TNGSQFFICTVKT---------PW--LDNRHVVFGQV 225
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Match: B9EVK2_ORYSJ (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9EVK2_ORYSJ) HSP 1 Score: 55.5 bits (132), Expect = 3.210e-5 Identity = 46/173 (26.59%), Postives = 70/173 (40.46%), Query Frame = 2
Query: 299 QITDRCALDVAVSGQPAGTIVIGLWGRAAPELVGTFAALCRNDLVVPGGELFGYDDSQIDQVSKGRAVSFGRVKVPAGMFRRAAKAQPEDFAPPPSDDRTPQRHDRPGLVSVPRGGASFRFLVTAGQAAAVNXXXXXXXXXLFGGPWRGLDDENVVVGQVRASGKKKRNAEEK 817
++ +C DV V G+PAG IVIGL+G P+ V F ALC D + +GY ++ K + G + G R+ + D D+ +H PG++S+ G T G + PW LD+ +VV G V +N E +
Sbjct: 64 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGD------KGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFD------DENFTLKHTGPGVLSMANAGPD-----TNGSQFFICTVKT---------PW--LDNRHVVFGHVLEGMDVVKNLESQ 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig535.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig535.1.2 >prot_P-wetherbeei_contig535.1.2 ID=prot_P-wetherbeei_contig535.1.2|Name=mRNA_P-wetherbeei_contig535.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=353bp MDYDSNPRPAHPAPSSRRAALQTLSKVAAGTALWGAIEIPAASAEQPALWback to top mRNA from alignment at P-wetherbeei_contig535:1564..3379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig535.1.2 ID=mRNA_P-wetherbeei_contig535.1.2|Name=mRNA_P-wetherbeei_contig535.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1816bp|location=Sequence derived from alignment at P-wetherbeei_contig535:1564..3379- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig535:1564..3379- >mRNA_P-wetherbeei_contig535.1.2 ID=mRNA_P-wetherbeei_contig535.1.2|Name=mRNA_P-wetherbeei_contig535.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1059bp|location=Sequence derived from alignment at P-wetherbeei_contig535:1564..3379- (Phaeothamnion wetherbeei SAG_119_79)back to top |