mRNA_P-wetherbeei_contig53475.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53475.1.1
Unique NamemRNA_P-wetherbeei_contig53475.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A6A7MDZ7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MDZ7_9PROT)

HSP 1 Score: 70.5 bits (171), Expect = 1.190e-11
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVL 303
            TASY  S   V V+L SGQGFTG A+GDTLF IEN+ GSSY D+LIG++GAN L
Sbjct:   99 TASYEGSDEGVVVNLLSGQGFTGDAQGDTLFGIENLWGSSYGDILIGNDGANEL 152          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: UPI00186AB366 (cellulase family glycosylhydrolase n=1 Tax=Aureimonas psammosilenae TaxID=2495496 RepID=UPI00186AB366)

HSP 1 Score: 66.2 bits (160), Expect = 5.430e-10
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVL 303
            TASY  S A V VDL +GQGF G A GD L SIEN++GS +DD L GD G N+L
Sbjct: 1556 TASYEGSQAGVRVDLVAGQGFGGDAEGDRLISIENITGSRFDDALSGDSGRNIL 1609          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A2E3EUV5_9PROT (Peptidase_M10_C domain-containing protein n=1 Tax=Tistrella sp. TaxID=2024861 RepID=A0A2E3EUV5_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 6.210e-10
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query:  145 ASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAGF 312
            A+Y  S   V VDLASG+GF G A GD L +IENV+GS++DD+L GD GAN L GF
Sbjct:  139 ATYSTSSIGVRVDLASGRGFGGDAEGDQLVAIENVNGSTFDDVLEGDAGANHLIGF 194          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A3B9IUL3_9PROT (Hemolysin n=1 Tax=Tistrella mobilis TaxID=171437 RepID=A0A3B9IUL3_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 7.170e-10
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 1
Query:  145 ASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAGF 312
            A+Y  S   V VDLASG+GF G A GD L +IENV+GS++DD+L GD GAN L GF
Sbjct:  779 ATYSTSSIGVRVDLASGRGFGGDAEGDQLVAIENVNGSTFDDVLEGDAGANHLIGF 834          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: UPI001F3F978C (hypothetical protein n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=UPI001F3F978C)

HSP 1 Score: 65.9 bits (159), Expect = 7.240e-10
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGAN 297
            TA+Y  S  PV VDL  G GFTG AR DTLFSIEN+ GS  DD+LIG++GAN
Sbjct:  516 TATYRLSVKPVHVDLTLGAGFTGEARNDTLFSIENLIGSGGDDILIGNKGAN 567          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A437P1L7_9HYPH (Calcium-binding protein n=1 Tax=Methylobacterium oryzihabitans TaxID=2499852 RepID=A0A437P1L7_9HYPH)

HSP 1 Score: 65.1 bits (157), Expect = 1.300e-9
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAG 309
            TASY DS + V V+L +G+G  G A GDTL  IENV GSSY D+LIGD GAN + G
Sbjct:   69 TASYFDSASGVTVNLETGKGGGGDAEGDTLTGIENVQGSSYADILIGDAGANRIQG 124          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: UPI00166BBC95 (hypothetical protein n=1 Tax=Azorhizobium oxalatiphilum TaxID=980631 RepID=UPI00166BBC95)

HSP 1 Score: 64.3 bits (155), Expect = 2.370e-9
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVL 303
            TA Y  S   V VDL +G G+ G A GDTL SIEN++GS YDD+LIGD+GAN L
Sbjct:   90 TAVYTYSPTRVIVDLNTGTGYGGAAEGDTLISIENLNGSFYDDVLIGDDGANTL 143          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A0A0D2K7_9PROT (Uncharacterized protein n=1 Tax=Inquilinus limosus MP06 TaxID=1398085 RepID=A0A0A0D2K7_9PROT)

HSP 1 Score: 63.5 bits (153), Expect = 4.280e-9
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1
Query:  145 ASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAGFGG 318
            ASY D+ A VWVDL++ QG+ G A GD L  IE+++GS + D+L+GD  AN L G  G
Sbjct:   58 ASYFDASAGVWVDLSASQGYAGDAAGDILSGIEDINGSGFADVLVGDAAANRLQGGNG 115          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: A0A6I5PAD6_9CYAN (Calcium-binding protein n=1 Tax=Leptolyngbya sp. SIO3F4 TaxID=2607780 RepID=A0A6I5PAD6_9CYAN)

HSP 1 Score: 63.2 bits (152), Expect = 6.130e-9
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAGFG 315
            TASY  S + V V L SG GF G A+GD L  IEN+ GS ++DLLIGD G N + G G
Sbjct:   24 TASYFTSESGVSVSLTSGTGFAGDAQGDQLIGIENLEGSEFEDLLIGDFGNNAICGLG 81          
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Match: UPI001689BBDA (Uncharacterized protein n=2 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001689BBDA)

HSP 1 Score: 63.2 bits (152), Expect = 6.450e-9
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 1
Query:  142 TASYHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANVLAGFGG 318
            TASY +S   V V L +G G+ G ARGDTL  IEN+ GS ++DLLIGD   N + G GG
Sbjct: 1060 TASYFNSETGVGVSLTTGTGWAGDARGDTLIGIENLEGSEFEDLLIGDLFNNTICGLGG 1118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53475.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A7MDZ7_9PROT1.190e-1166.67Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
UPI00186AB3665.430e-1061.11cellulase family glycosylhydrolase n=1 Tax=Aureimo... [more]
A0A2E3EUV5_9PROT6.210e-1060.71Peptidase_M10_C domain-containing protein n=1 Tax=... [more]
A0A3B9IUL3_9PROT7.170e-1060.71Hemolysin n=1 Tax=Tistrella mobilis TaxID=171437 R... [more]
UPI001F3F978C7.240e-1065.38hypothetical protein n=1 Tax=Zavarzinia compransor... [more]
A0A437P1L7_9HYPH1.300e-960.71Calcium-binding protein n=1 Tax=Methylobacterium o... [more]
UPI00166BBC952.370e-961.11hypothetical protein n=1 Tax=Azorhizobium oxalatip... [more]
A0A0A0D2K7_9PROT4.280e-951.72Uncharacterized protein n=1 Tax=Inquilinus limosus... [more]
A0A6I5PAD6_9CYAN6.130e-955.17Calcium-binding protein n=1 Tax=Leptolyngbya sp. S... [more]
UPI001689BBDA6.450e-954.24Uncharacterized protein n=2 Tax=Microcoleus sp. FA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53475contigP-wetherbeei_contig53475:15..419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog744980.TRICHSKD4_3508
PFAMsHemolysinCabind,Hint_2
Model size405
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.12e-09
EggNOG OGsCOG2931@1|root,COG2931@2|Bacteria,1MU7T@1224|Proteobacteria,2TRVY@28211|Alphaproteobacteria
DescriptionCOG2931 RTX toxins and related Ca2 -binding proteins
Cds size405
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186799.7828455-CDS-P-wetherbeei_contig53475:14..4191683186799.7828455-CDS-P-wetherbeei_contig53475:14..419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53475 15..419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53475.1.1prot_P-wetherbeei_contig53475.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53475 15..419 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53475.1.1

>prot_P-wetherbeei_contig53475.1.1 ID=prot_P-wetherbeei_contig53475.1.1|Name=mRNA_P-wetherbeei_contig53475.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
MAIKTGTNGVDLLYGTSGNDTIKGFGGADRITGGYGADAIYGGDGSDTAS
YHDSGAPVWVDLASGQGFTGTARGDTLFSIENVSGSSYDDLLIGDEGANV
LAGFGGNDTLKGGGGDDYLSGFEGNDFLVGGAGAD
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mRNA from alignment at P-wetherbeei_contig53475:15..419-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53475.1.1 ID=mRNA_P-wetherbeei_contig53475.1.1|Name=mRNA_P-wetherbeei_contig53475.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig53475:15..419- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAATCAAAACTGGTACGAACGGTGTCGATCTCCTTTACGGCACCTC CGGCAACGACACAATAAAAGGCTTCGGCGGCGCCGACCGGATCACAGGCG GCTATGGCGCCGACGCGATCTATGGCGGGGACGGAAGCGATACCGCCTCC TACCACGACTCCGGCGCACCCGTATGGGTCGACCTCGCAAGCGGCCAGGG TTTCACCGGCACCGCTCGCGGCGACACGCTCTTCAGTATCGAGAATGTCA GCGGCTCCAGTTACGACGACTTGCTCATCGGCGACGAGGGCGCCAACGTG CTGGCCGGCTTCGGCGGCAACGACACCTTGAAGGGCGGCGGTGGCGATGA CTATCTGTCCGGCTTCGAAGGCAATGACTTTCTCGTGGGCGGCGCCGGCG CCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53475:15..419-

>mRNA_P-wetherbeei_contig53475.1.1 ID=mRNA_P-wetherbeei_contig53475.1.1|Name=mRNA_P-wetherbeei_contig53475.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig53475:15..419- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAATCAAAACTGGTACGAACGGTGTCGATCTCCTTTACGGCACCTC
CGGCAACGACACAATAAAAGGCTTCGGCGGCGCCGACCGGATCACAGGCG
GCTATGGCGCCGACGCGATCTATGGCGGGGACGGAAGCGATACCGCCTCC
TACCACGACTCCGGCGCACCCGTATGGGTCGACCTCGCAAGCGGCCAGGG
TTTCACCGGCACCGCTCGCGGCGACACGCTCTTCAGTATCGAGAATGTCA
GCGGCTCCAGTTACGACGACTTGCTCATCGGCGACGAGGGCGCCAACGTG
CTGGCCGGCTTCGGCGGCAACGACACCTTGAAGGGCGGCGGTGGCGATGA
CTATCTGTCCGGCTTCGAAGGCAATGACTTTCTCGTGGGCGGCGCCGGCG
CCGAC
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