prot_P-wetherbeei_contig5344.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5344.1.2
Unique Nameprot_P-wetherbeei_contig5344.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length230
Homology
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A836CHX6_9STRA (RF-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 6.210e-27
Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   49 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARK 133
            R +L E D+ E F+KGSGPGGQKINKVR+ VQL H PTGI V CQ+AR L +NR+IAR  L +KVE HL+G +SRIGRR+ R +K
Sbjct:   36 RLKLNEADIRESFVKGSGPGGQKINKVRSCVQLTHLPTGIQVQCQDARDLISNRAIARKMLAEKVEFHLRGKDSRIGRRVSRVQK 120          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A6H5K1A9_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1A9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 6.380e-26
Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 0
Query:   50 FELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKKDRGRRRA 142
            FEL +ED+EE+F  GSGPGGQKINKVRN VQL H P+G++VSCQ++R L ANR IAR  L++KVE  L GA+S++GRRI   R KK R +R++
Sbjct:   53 FELLDEDIEERF--GSGPGGQKINKVRNCVQLTHLPSGVSVSCQDSRELHANRHIARKRLKEKVEFQLMGADSKVGRRINNIRNKKARSQRKS 143          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A0G4IRH9_PLABS (RF_PROK_I domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRH9_PLABS)

HSP 1 Score: 99.8 bits (247), Expect = 8.710e-23
Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = 0
Query:   39 ARAASLSSSRRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKKDRGRRRA 142
            AR  SL SS  F+  E+DL+EKFI G G GGQKINK  + VQLVH+PTG+ + CQE RSL  NRSIAR  L  ++++ L G +SRI RR ER R++K + R R+
Sbjct:   17 ARPRSLFSSTLFD--EDDLDEKFIHGGGNGGQKINKTASCVQLVHKPTGLLIKCQETRSLQQNRSIARKRLAAQLDLQLNGDSSRIARRQERLRRRKSKHRSRS 118          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A7S2S280_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S280_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.770e-23
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 0
Query:   31 PVESVLRNARAASLSSS-RRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRI 128
            PV   L   RA   S +  R  L E DLEE F+KG+GPGGQKINKVRN VQL H PTG+ V+ Q+ RSLTANR+IAR  L +KV++ + G  S++G+++
Sbjct:   54 PVARALGQVRAVHRSHAVSRLTLSENDLEEAFVKGTGPGGQKINKVRNCVQLRHTPTGLTVAVQDGRSLTANRAIARKRLAEKVDLEMNGRESKLGKKV 152          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A317VKA1_9EURO (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Aspergillus heteromorphus CBS 117.55 TaxID=1448321 RepID=A0A317VKA1_9EURO)

HSP 1 Score: 97.4 bits (241), Expect = 3.540e-22
Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   49 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 135
            R ++E+ DL + ++KG+GPGGQKINK  + VQL+H+PTG+ + CQ  RS + N   AR  L DKVE HL G  SR   ++ERARKKK
Sbjct:   19 RLKIEDADLIKSYLKGTGPGGQKINKTNSAVQLIHKPTGVVIKCQATRSRSQNEKTARQLLADKVEQHLHGDQSRAAIKVERARKKK 105          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A8K0JDT0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JDT0_9TREE)

HSP 1 Score: 98.6 bits (244), Expect = 1.110e-21
Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 0
Query:   18 SRTLMTRKSSLPTPVESVLRNARAASLSSSRRFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 135
            + T++ + + LP+ ++ + +      L++ +  +L EE+LEE+F++GSGPGGQ INK  N V L+H PTGI + CQE RSL  NR +AR  LRDKVE HL   NS+   + E+ R++K
Sbjct:   60 NHTIVPKPNKLPSSIKKLNKQ-----LATRQSPDLPEEELEERFVRGSGPGGQSINKTSNAVSLIHIPTGIRIQCQETRSLQHNRRLARQILRDKVEQHLSPGNSKQDIKWEKERRRK 172          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A8H5BXJ9_9AGAR (Mitochondrial zinc maintenance protein 1, mitochondrial n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BXJ9_9AGAR)

HSP 1 Score: 99.4 bits (246), Expect = 2.310e-21
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 0
Query:   27 SLPTPVESVLRNARAASLSSSRRF--ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHL 117
            S PTP  ++ RN  A    S  R   EL EEDLEE FI+GSGPGGQ INK  N VQLVH+PTG+ V+CQ+ RSL  NR +AR WL +K  V++
Sbjct:  143 SSPTPAGALPRNFSALRRVSKERVLPELREEDLEESFIRGSGPGGQSINKTENNVQLVHKPTGLRVACQDTRSLAQNRKLARRWLLEKACVYV 235          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A1Y2FUL4_PROLT (RF-1 domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FUL4_PROLT)

HSP 1 Score: 96.3 bits (238), Expect = 2.900e-21
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 0
Query:   51 ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIERARKKK 135
            E+ E+D+EEKF++G+GPGGQKINK     QL H P+GI VSCQE RSL  NRSIAR  LR+KV+ H+ G  SR+  ++  + +KK
Sbjct:   63 EISEDDIEEKFVRGTGPGGQKINKTSIVAQLKHLPSGIQVSCQETRSLQQNRSIARKRLREKVDAHINGDESRVMAKVRESVRKK 147          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A165HEW2_9APHY (Mitochondrial zinc maintenance protein 1, mitochondrial n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165HEW2_9APHY)

HSP 1 Score: 97.4 bits (241), Expect = 3.400e-21
Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
Query:   51 ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHL 117
            EL+EEDLEE F++GSGPGGQ INK  N VQL+H+PTGI V+CQE RSL  NR++AR WL DK  + L
Sbjct:  155 ELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVACQETRSLNQNRALARKWLLDKARLFL 221          
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Match: A0A0L0DGI0_THETB (Peptide release factor n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DGI0_THETB)

HSP 1 Score: 94.7 bits (234), Expect = 3.970e-21
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 0
Query:   49 RFELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTANRSIARGWLRDKVEVHLQGANSRIGRRIER 130
            R ++ E++LEE F+ GSGPGGQKINK ++RV+LVH PTG+ V  Q+ RS  ANR+IAR  L DKVE  L+G  SR+GR+ +R
Sbjct:   12 RHKVAEDELEETFLHGSGPGGQKINKTQSRVRLVHAPTGLTVVVQDTRSREANRTIARKRLADKVEAQLKGNASRLGRKAQR 93          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5344.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHX6_9STRA6.210e-2763.53RF-1 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5K1A9_9PHAE6.380e-2661.29RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A0G4IRH9_PLABS8.710e-2354.81RF_PROK_I domain-containing protein n=1 Tax=Plasmo... [more]
A0A7S2S280_9STRA9.770e-2353.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A317VKA1_9EURO3.540e-2252.87RF_PROK_I domain-containing protein (Fragment) n=1... [more]
A0A8K0JDT0_9TREE1.110e-2144.07Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
A0A8H5BXJ9_9AGAR2.310e-2155.91Mitochondrial zinc maintenance protein 1, mitochon... [more]
A0A1Y2FUL4_PROLT2.900e-2155.29RF-1 domain-domain-containing protein n=1 Tax=Prot... [more]
A0A165HEW2_9APHY3.400e-2165.67Mitochondrial zinc maintenance protein 1, mitochon... [more]
A0A0L0DGI0_THETB3.970e-2157.32Peptide release factor n=1 Tax=Thecamonas trahens ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 50..135
e-value: 1.1E-20
score: 73.7
NoneNo IPR availableGENE3D3.30.160.20coord: 9..124
e-value: 1.4E-26
score: 94.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..189
NoneNo IPR availablePANTHERPTHR46203PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65coord: 23..142
IPR045853Peptide chain release factor class I superfamilySUPERFAMILY75620Release factorcoord: 47..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5344contigP-wetherbeei_contig5344:168..1642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5344.1.2mRNA_P-wetherbeei_contig5344.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5344 11..1725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5344.1.2 ID=prot_P-wetherbeei_contig5344.1.2|Name=mRNA_P-wetherbeei_contig5344.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp
MLRCAYRNAWQECSLAVSRTLMTRKSSLPTPVESVLRNARAASLSSSRRF
ELEEEDLEEKFIKGSGPGGQKINKVRNRVQLVHRPTGIAVSCQEARSLTA
NRSIARGWLRDKVEVHLQGANSRIGRRIERARKKKDRGRRRALGRAAGAD
GICVGIGANDGGDGGAGLEREIDGRHEVGDDDEEGYSGRERLAVAGSCGS
SDGESNKPAEPGHLTERDPFRARHGGPLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I
IPR045853Pep_chain_release_fac_I_sf