prot_P-wetherbeei_contig53400.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig53400.1.1
Unique Nameprot_P-wetherbeei_contig53400.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length92
Homology
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: A0A401U2K1_CHIPU (Uncharacterized protein (Fragment) n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401U2K1_CHIPU)

HSP 1 Score: 175 bits (443), Expect = 4.800e-55
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVTSRIERALN+AIG+AE+PGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHP AT AAG ALELLHCASLVHDDLPCFDAAETRR
Sbjct:    1 MDVTSRIERALNEAIGQAELPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPAATNAAGAALELLHCASLVHDDLPCFDAAETRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: A0A2U8PY68_9BRAD (Polyprenyl synthetase family protein n=10 Tax=Bradyrhizobium TaxID=374 RepID=A0A2U8PY68_9BRAD)

HSP 1 Score: 173 bits (438), Expect = 4.920e-52
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVTSRIERALN+AI +AE+PGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHP AT+AAG ALELLHCASLVHDDLPCFDAAETRR
Sbjct:    1 MDVTSRIERALNEAIDQAELPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPAATDAAGAALELLHCASLVHDDLPCFDAAETRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: UPI00199AC26E (Polyprenyl synthetase family protein n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI00199AC26E)

HSP 1 Score: 169 bits (427), Expect = 2.250e-50
Identity = 81/92 (88.04%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDV SRIERALN+A+  AEVPGCPPRLAAAMRYAVFP+GAR+RPRLCHSV+AACGEDHP ATEAAG ALELLHCASLVHDDLPCFDAA+TRR
Sbjct:    1 MDVASRIERALNEAVASAEVPGCPPRLAAAMRYAVFPKGARIRPRLCHSVSAACGEDHPTATEAAGAALELLHCASLVHDDLPCFDAADTRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: UPI0018068CAC (Polyprenyl synthetase family protein n=1 Tax=Rhodopseudomonas sp. TaxID=1078 RepID=UPI0018068CAC)

HSP 1 Score: 161 bits (408), Expect = 1.650e-47
Identity = 79/92 (85.87%), Postives = 85/92 (92.39%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVT+RIERAL DA+ +A+V GCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGED+P ATEAAG ALEL+HCASLVHDDLPCFD A TRR
Sbjct:    1 MDVTNRIERALTDALNQADVTGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDNPAATEAAGAALELMHCASLVHDDLPCFDGAATRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: A0A7W7Z8B2_9BRAD (Geranylgeranyl diphosphate synthase type II n=4 Tax=Rhodopseudomonas TaxID=1073 RepID=A0A7W7Z8B2_9BRAD)

HSP 1 Score: 156 bits (395), Expect = 1.490e-45
Identity = 78/92 (84.78%), Postives = 82/92 (89.13%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVT+RIE+AL DAIG A V GCPPRLA AMRYAVFPRGARVRPRLCHSVAAACGED+P AT AAG ALEL+HCASLVHDDLPCFD A TRR
Sbjct:    1 MDVTNRIEQALTDAIGLAAVTGCPPRLAEAMRYAVFPRGARVRPRLCHSVAAACGEDNPAATAAAGAALELMHCASLVHDDLPCFDGAATRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: A0A4Q5PLX8_9BRAD (Geranylgeranyl pyrophosphate synthase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A4Q5PLX8_9BRAD)

HSP 1 Score: 156 bits (395), Expect = 1.490e-45
Identity = 76/92 (82.61%), Postives = 84/92 (91.30%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDV SRIE+ALN+A+ RA+V GCPPRLAAAMRYAVFP+GAR+RPRLCHSVAAACGEDHP A +AAG ALELLH ASLVHDDLPCFDAA+ RR
Sbjct:    1 MDVASRIEQALNNALSRADVSGCPPRLAAAMRYAVFPKGARIRPRLCHSVAAACGEDHPAAADAAGAALELLHSASLVHDDLPCFDAADIRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: UPI001163975D (polyprenyl synthetase family protein n=2 Tax=unclassified Tardiphaga TaxID=2631404 RepID=UPI001163975D)

HSP 1 Score: 154 bits (389), Expect = 1.190e-44
Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDV SRIE+ALN AI R+EV  CPPRLAAAMRYAVFP+GAR+RPRLCHSVAAACGED+  AT+A G ALELLHCASLVHDDLPCFDAA+TRR
Sbjct:    1 MDVASRIEQALNTAIARSEVAECPPRLAAAMRYAVFPKGARIRPRLCHSVAAACGEDNAAATDATGAALELLHCASLVHDDLPCFDAADTRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: Q132K9_RHOPS (Farnesyl-diphosphate synthase n=3 Tax=Rhodopseudomonas TaxID=1073 RepID=Q132K9_RHOPS)

HSP 1 Score: 152 bits (384), Expect = 6.750e-44
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVT+RIERAL +A+ +A++ GCPPRLAAAMR AVFPRGARVRPRLCHSVA ACGED+P ATEAAG ALEL+HCASLVHDDLPCFD A+ RR
Sbjct:    1 MDVTNRIERALTEALSQADLAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPAATEAAGAALELMHCASLVHDDLPCFDGADIRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: Q6N9M1_RHOPA (Geranylgeranyl pyrophosphate synthase n=15 Tax=Rhodopseudomonas TaxID=1073 RepID=Q6N9M1_RHOPA)

HSP 1 Score: 149 bits (375), Expect = 1.520e-42
Identity = 72/92 (78.26%), Postives = 82/92 (89.13%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDVT+RIERAL +A+ +A++ GCPPRLAAAMR AVFPRGARVRPRLCHSVA ACGED+P  TEAAG ALEL+HCASL+HDDLPCFD A+ RR
Sbjct:    1 MDVTNRIERALTEALNQADMAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPGITEAAGAALELMHCASLIHDDLPCFDGADLRR 92          
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Match: UPI001BA7C44F (polyprenyl synthetase family protein n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI001BA7C44F)

HSP 1 Score: 147 bits (370), Expect = 8.800e-42
Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
Query:    1 MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSVAAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR 92
            MDV +RIE+ALN AIG A+ PGCPPRLAAAMR AVFP+GARVRPRLCH+VA+ACG+D P AT+AAG A+ELLHCASLVHDDLPCFD A  RR
Sbjct:    1 MDVATRIEKALNHAIGLADQPGCPPRLAAAMRAAVFPKGARVRPRLCHAVASACGDDEPGATDAAGAAIELLHCASLVHDDLPCFDDAALRR 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53400.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401U2K1_CHIPU4.800e-5593.48Uncharacterized protein (Fragment) n=1 Tax=Chilosc... [more]
A0A2U8PY68_9BRAD4.920e-5292.39Polyprenyl synthetase family protein n=10 Tax=Brad... [more]
UPI00199AC26E2.250e-5088.04Polyprenyl synthetase family protein n=1 Tax=Tardi... [more]
UPI0018068CAC1.650e-4785.87Polyprenyl synthetase family protein n=1 Tax=Rhodo... [more]
A0A7W7Z8B2_9BRAD1.490e-4584.78Geranylgeranyl diphosphate synthase type II n=4 Ta... [more]
A0A4Q5PLX8_9BRAD1.490e-4582.61Geranylgeranyl pyrophosphate synthase n=1 Tax=Brad... [more]
UPI001163975D1.190e-4482.61polyprenyl synthetase family protein n=2 Tax=uncla... [more]
Q132K9_RHOPS6.750e-4480.43Farnesyl-diphosphate synthase n=3 Tax=Rhodopseudom... [more]
Q6N9M1_RHOPA1.520e-4278.26Geranylgeranyl pyrophosphate synthase n=15 Tax=Rho... [more]
UPI001BA7C44F8.800e-4278.26polyprenyl synthetase family protein n=1 Tax=Brady... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 1..92
e-value: 6.4E-23
score: 83.1
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 4..92
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 26..92
e-value: 2.4E-12
score: 46.5
NoneNo IPR availablePANTHERPTHR43281:SF1FARNESYL DIPHOSPHATE SYNTHASEcoord: 6..92
NoneNo IPR availablePANTHERPTHR43281FARNESYL DIPHOSPHATE SYNTHASEcoord: 6..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53400contigP-wetherbeei_contig53400:262..537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53400.1.1mRNA_P-wetherbeei_contig53400.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig53400 262..537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig53400.1.1 ID=prot_P-wetherbeei_contig53400.1.1|Name=mRNA_P-wetherbeei_contig53400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp
MDVTSRIERALNDAIGRAEVPGCPPRLAAAMRYAVFPRGARVRPRLCHSV
AAACGEDHPLATEAAGVALELLHCASLVHDDLPCFDAAETRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR000092Polyprenyl_synt