mRNA_P-wetherbeei_contig53338.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53338.1.1
Unique NamemRNA_P-wetherbeei_contig53338.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A537NHR4_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NHR4_9PROT)

HSP 1 Score: 193 bits (491), Expect = 1.600e-61
Identity = 89/129 (68.99%), Postives = 107/129 (82.95%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRNAA 387
            M KFT+DH+HLRSP+PE TA +YERMFGAEV+RT+QQGKPR+DL LGG+ +FIA    GD +   P +PY GLDH GL+V GIDA VAEL AKGAEFT EPT++RP VR+AFLR P+GV+IEL+DRNAA
Sbjct:    1 MPKFTYDHIHLRSPNPETTAAYYERMFGAEVVRTMQQGKPRIDLKLGGVNIFIAPVGPGDGVNPPPATPYQGLDHFGLSVRGIDAIVAELTAKGAEFTREPTSVRPGVRVAFLRAPEGVSIELLDRNAA 129          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A537UQY1_9PROT (VOC family protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UQY1_9PROT)

HSP 1 Score: 193 bits (491), Expect = 1.600e-61
Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRNAA 387
            M K+T DH+HLR+ +PEATAQ+YERM GAEV+R++QQGKPR+DL LGG  +FIA  A GD +   P +PY GLDH GLTVTGIDA VAELKAKG EFT EPTT+RP VR+AFLR P+GV+IEL+DRNAA
Sbjct:    1 MVKYTWDHIHLRTANPEATAQWYERMLGAEVIRSMQQGKPRIDLKLGGANIFIAPVAPGDGVNPPPITPYQGLDHFGLTVTGIDAVVAELKAKGVEFTREPTTVRPGVRVAFLRAPEGVSIELLDRNAA 129          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A6A7KVZ7_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KVZ7_9PROT)

HSP 1 Score: 188 bits (477), Expect = 2.320e-59
Identity = 93/127 (73.23%), Postives = 102/127 (80.31%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRN 381
            M  F  DH+HLRSPDPEATA FYE+MFGA VLR+ Q GK RVD+DL G KVFIAQ A  DK+ A+P SPYLGLDH+GL VTGID    ELK KGA FTMEPTTIRP VRIAFLRGPQ V+IELVDR+
Sbjct:    1 MGAFKFDHIHLRSPDPEATALFYEKMFGATVLRSTQNGKLRVDMDLCGQKVFIAQVAPTDKVAASPKSPYLGLDHLGLIVTGIDKLADELKGKGAAFTMEPTTIRPGVRIAFLRGPQDVSIELVDRS 127          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: UPI0009304748 (VOC family protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI0009304748)

HSP 1 Score: 187 bits (476), Expect = 2.890e-59
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRN 381
            MA F  DH+HLRSPDPEATA FYERMFGAEV+RTVQQGK R+DL +GG  VFIA    GD + + P +PY GLDH GL VTGIDA VA+LK KGAEFTMEP  IRP VRIAFLRGP+GV+IEL++R+
Sbjct:    1 MATFKWDHIHLRSPDPEATAAFYERMFGAEVIRTVQQGKTRIDLKIGGGSVFIAPVTPGDGVASPPKTPYQGLDHFGLEVTGIDAIVADLKKKGAEFTMEPNNIRPGVRIAFLRGPEGVSIELLERS 127          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A1M3PUP9_9PROT (Glyoxalase n=1 Tax=Rhodospirillales bacterium 70-18 TaxID=1895826 RepID=A0A1M3PUP9_9PROT)

HSP 1 Score: 187 bits (475), Expect = 4.250e-59
Identity = 90/126 (71.43%), Postives = 99/126 (78.57%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDR 378
            MA F +DH+HLR+ DPE T  FYE MFGAEV+RT Q GKPR+DL LGG+ VFIA     D + AAP SPY GLDH GL VTGIDA VA LK KGAEFTMEPTTIRP VRIAFLRGP GVAIEL++R
Sbjct:    1 MAAFVYDHIHLRTADPEGTTGFYETMFGAEVIRTTQDGKPRIDLKLGGMNVFIAPVGPQDAVAAAPASPYRGLDHFGLRVTGIDAVVAALKEKGAEFTMEPTTIRPGVRIAFLRGPDGVAIELLER 126          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A6L5FFF8_9HYPH (VOC family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FFF8_9HYPH)

HSP 1 Score: 186 bits (473), Expect = 8.840e-59
Identity = 86/129 (66.67%), Postives = 103/129 (79.84%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRNAA 387
            M  +T DH+HLRSPDPEATA ++ERM GAEV+R++Q GKPR+DL LGG  +FIA  A GD +   PT+PY GLDH GLTV GIDA  AELK KGAEFT EPTT+RP VR+ F+RGPQGV+IEL+DR+ A
Sbjct:    1 MPTYTWDHIHLRSPDPEATAAWFERMLGAEVIRSMQLGKPRIDLKLGGANIFIAPVAAGDAVNPPPTTPYQGLDHFGLTVNGIDAIAAELKGKGAEFTTEPTTVRPGVRVCFIRGPQGVSIELLDRSHA 129          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A537PM24_9PROT (VOC family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PM24_9PROT)

HSP 1 Score: 183 bits (465), Expect = 1.510e-57
Identity = 91/130 (70.00%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQ-GKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRNAA 387
            MA FT+DH+HLRSPD EATA++Y  MFGAE++R+VQ  G+PR+DL+LGG+ VFIAQ  +   + A P  PYLGL+HIGL V+GID AVAELK KGAEFT EPTTIRP VRIAFLRGPQ V IEL+DRNAA
Sbjct:    1 MATFTYDHIHLRSPDAEATARWYADMFGAEIIRSVQSDGRPRLDLNLGGVAVFIAQVPSEQAVAAPPQPPYLGLEHIGLRVSGIDDAVAELKKKGAEFTREPTTIRPGVRIAFLRGPQNVHIELLDRNAA 130          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A1Q7BSA5_9PROT (Glyoxalase n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BSA5_9PROT)

HSP 1 Score: 181 bits (460), Expect = 8.450e-57
Identity = 84/126 (66.67%), Postives = 102/126 (80.95%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDR 378
            MA +T DH+HLR+P+PEATAQ+YERM GAEV+R++QQGKPR+DL LGG  +FIA    GD +   P +PY GLDH GLTV GIDA VAELKAKG EFT  PTT+RP VR+AFLR P+GV+IEL++R
Sbjct:    1 MATYTWDHIHLRTPNPEATAQWYERMLGAEVIRSMQQGKPRIDLKLGGANIFIAPVEPGDGVNPPPLTPYQGLDHFGLTVDGIDALVAELKAKGVEFTRGPTTVRPGVRVAFLRAPEGVSIELLER 126          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A127ES31_9HYPH (Glyoxalase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ES31_9HYPH)

HSP 1 Score: 181 bits (459), Expect = 1.160e-56
Identity = 80/126 (63.49%), Postives = 103/126 (81.75%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDR 378
            MAKFT DHVH+R+PDPEATAQ++E+M GAEV+R++QQG PR+D+ +GG  VF+A   TGD + + P +PY GLDH GL+VTGIDA  A+LKAKG +FT EPTT+RP  R+ F+ GPQGV+IEL+DR
Sbjct:    1 MAKFTWDHVHIRTPDPEATAQWFEKMLGAEVIRSMQQGAPRIDMKIGGANVFLAPVKTGDGVASPPQTPYQGLDHFGLSVTGIDAIAADLKAKGVKFTREPTTVRPGTRVCFIEGPQGVSIELLDR 126          
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Match: A0A317HUU8_9PROT (Glyoxalase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317HUU8_9PROT)

HSP 1 Score: 179 bits (454), Expect = 6.930e-56
Identity = 85/129 (65.89%), Postives = 101/129 (78.29%), Query Frame = 1
Query:    1 MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLKVFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTMEPTTIRPNVRIAFLRGPQGVAIELVDRNAA 387
            M  F +DH+HLRSPDPEATA FYERMFGA++LR+V  G+PR+DL LGG+ VFI   A G  +  AP SP+ GLDH GL V GID  VAELKAKGA FTMEP TIRP VR+AF+ GP+ V+IEL+DR+AA
Sbjct:    1 MPDFMYDHMHLRSPDPEATAAFYERMFGAQILRSVHGGQPRIDLKLGGVDVFIMAVAPGSDVNPAPVSPHQGLDHFGLRVRGIDGVVAELKAKGARFTMEPKTIRPGVRVAFMVGPENVSIELLDRDAA 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53338.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537NHR4_9PROT1.600e-6168.99VOC family protein n=1 Tax=Alphaproteobacteria bac... [more]
A0A537UQY1_9PROT1.600e-6169.77VOC family protein n=4 Tax=Alphaproteobacteria bac... [more]
A0A6A7KVZ7_9PROT2.320e-5973.23VOC family protein n=1 Tax=Alphaproteobacteria bac... [more]
UPI00093047482.890e-5970.87VOC family protein n=1 Tax=Hyphomicrobium sp. CS1B... [more]
A0A1M3PUP9_9PROT4.250e-5971.43Glyoxalase n=1 Tax=Rhodospirillales bacterium 70-1... [more]
A0A6L5FFF8_9HYPH8.840e-5966.67VOC family protein n=1 Tax=Hyphomicrobiales bacter... [more]
A0A537PM24_9PROT1.510e-5770.00VOC family protein n=1 Tax=Alphaproteobacteria bac... [more]
A0A1Q7BSA5_9PROT8.450e-5766.67Glyoxalase n=2 Tax=unclassified Alphaproteobacteri... [more]
A0A127ES31_9HYPH1.160e-5663.49Glyoxalase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID... [more]
A0A317HUU8_9PROT6.930e-5665.89Glyoxalase n=1 Tax=Proteobacteria bacterium TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53338contigP-wetherbeei_contig53338:126..515 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121106.JQKB01000006_gene1154
Preferred nameMA20_35640
PFAMsGlyoxalase,Glyoxalase_4
Model size390
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.87e-50
EggNOG OGsCOG0346@1|root,COG0346@2|Bacteria,1RB65@1224|Proteobacteria,2U7DP@28211|Alphaproteobacteria
DescriptionGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Cds size390
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186798.2557561-CDS-P-wetherbeei_contig53338:125..5151683186798.2557561-CDS-P-wetherbeei_contig53338:125..515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53338 126..515 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53338.1.1prot_P-wetherbeei_contig53338.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53338 126..515 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53338.1.1

>prot_P-wetherbeei_contig53338.1.1 ID=prot_P-wetherbeei_contig53338.1.1|Name=mRNA_P-wetherbeei_contig53338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
MAKFTHDHVHLRSPDPEATAQFYERMFGAEVLRTVQQGKPRVDLDLGGLK
VFIAQAATGDKIGAAPTSPYLGLDHIGLTVTGIDAAVAELKAKGAEFTME
PTTIRPNVRIAFLRGPQGVAIELVDRNAA*
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mRNA from alignment at P-wetherbeei_contig53338:126..515+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53338.1.1 ID=mRNA_P-wetherbeei_contig53338.1.1|Name=mRNA_P-wetherbeei_contig53338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig53338:126..515+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGAAATTTACCCACGACCACGTGCACCTCCGCAGCCCCGATCCGGA GGCAACAGCGCAATTCTATGAGCGCATGTTCGGCGCCGAGGTGCTGCGTA CCGTGCAGCAGGGCAAGCCGCGCGTCGATCTCGACCTGGGCGGCTTGAAA GTGTTCATTGCCCAGGCAGCCACAGGAGACAAGATCGGTGCGGCACCGAC TTCGCCTTATCTCGGCCTCGACCATATCGGCCTGACAGTCACGGGCATCG ACGCAGCGGTGGCCGAATTGAAGGCCAAAGGCGCGGAATTCACCATGGAG CCCACCACGATACGGCCCAACGTGCGCATCGCTTTCCTGCGCGGACCGCA AGGCGTGGCCATCGAACTGGTCGACCGCAACGCGGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53338:126..515+

>mRNA_P-wetherbeei_contig53338.1.1 ID=mRNA_P-wetherbeei_contig53338.1.1|Name=mRNA_P-wetherbeei_contig53338.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig53338:126..515+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGAAATTTACCCACGACCACGTGCACCTCCGCAGCCCCGATCCGGA
GGCAACAGCGCAATTCTATGAGCGCATGTTCGGCGCCGAGGTGCTGCGTA
CCGTGCAGCAGGGCAAGCCGCGCGTCGATCTCGACCTGGGCGGCTTGAAA
GTGTTCATTGCCCAGGCAGCCACAGGAGACAAGATCGGTGCGGCACCGAC
TTCGCCTTATCTCGGCCTCGACCATATCGGCCTGACAGTCACGGGCATCG
ACGCAGCGGTGGCCGAATTGAAGGCCAAAGGCGCGGAATTCACCATGGAG
CCCACCACGATACGGCCCAACGTGCGCATCGCTTTCCTGCGCGGACCGCA
AGGCGTGGCCATCGAACTGGTCGACCGCAACGCGGCCTGA
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