mRNA_P-wetherbeei_contig5330.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A835ZD87_9STRA (Galactose-binding domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD87_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.280e-69 Identity = 112/197 (56.85%), Postives = 144/197 (73.10%), Query Frame = 1
Query: 1 MGDCREAHEDAGGNRHNHDDCEGC--------EECGGHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETTN 567
M CR HE GG H+H E+ G SL+G IDTTRVRCLNES G VL+C+KPW +RRE EP LESND DP+L+IHVPFT+VVKIKAI+++GGR G AP+ ++VWVNRDD+DF++AED+P +Q++EL VA SG + +DYPTK++K QNVSS+ LF +N+GAD T +SFLGF+GE+TN
Sbjct: 1 MSACRGEHEGCGGG-HDHSXXXXXXXXXXXDIEDPTGQSLYGLIDTTRVRCLNESAVGQVLQCLKPWDKRREPEPFLESNDGDPELLIHVPFTEVVKIKAISLLGGRDGAAPSKMKVWVNRDDIDFTSAEDVPGVQSMEL-----VADSGGVE--VDYPTKLHKFQNVSSVTLFFGDNHGADTTVLSFLGFRGESTN 189
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: D8LJA7_ECTSI (PITH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA7_ECTSI) HSP 1 Score: 208 bits (530), Expect = 4.280e-65 Identity = 101/164 (61.59%), Postives = 129/164 (78.66%), Query Frame = 1
Query: 73 EECGGHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETT 564
E+ G SLFG IDTTRVRCLNES PGS L C+KPW +RR+ +P LES +DDP+LII+VPFTQVVKI+AI+V GG G+AP+ ++V+VNRDD+DF A+DLP +QT+E+ V SG + +DYPTK++K QNVS I LFVP N+GAD T I++LGFKGE+T
Sbjct: 36 EDPDGMSLFGLIDTTRVRCLNESAPGSGLNCLKPWDKRRDPQPRLESEEDDPELIIYVPFTQVVKIRAISVTGGGEGSAPSAMKVFVNRDDIDFGLAQDLPAVQTLEM-----VRDSGGVE--VDYPTKLSKMQNVSDITLFVPSNFGADSTVITYLGFKGEST 192
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: W7UAE5_9STRA (PITH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAE5_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.250e-52 Identity = 91/193 (47.15%), Postives = 129/193 (66.84%), Query Frame = 1
Query: 10 CREAHEDAGGNRHNHDDCEGC----EECGGHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGG--TAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETTNV 570
CR H D+ G+ H+H E C E+ G S+F IDT++VRCLNE+ G+ L K + +RRE EP L+S+DDDP+L++ VPFT++VK+K+IN++GG G TAP ++++VNRDD+DF N +L Q +EL + A G +DYP KV+K QNVSS+ +F EN G D T +S++GFKGE T+V
Sbjct: 3 CRGDHIDSCGHGHDHAHGEECDHEAEDPDGQSMFAAIDTSKVRCLNENEIGACLHPFKLYNKRREPEPRLDSHDDDPELLLFVPFTRIVKLKSINIIGGHAGEGTAPTKIKLFVNRDDIDFGNCNELMAAQELELVANAAAMGDGGG---IDYPLKVSKFQNVSSLTIFFSENGGGDVTSVSYVGFKGEITSV 192
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A7S4HIT9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HIT9_9EUKA) HSP 1 Score: 160 bits (405), Expect = 2.860e-46 Identity = 78/162 (48.15%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 85 GHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETTNV 570
G SL+ +I+T V CLNES PGSV C KP++ R + LESN+DD QLI+++PFT VKI I VVGG G++P+ L+VW NRDD+DFS A+DL PLQ +L D + ++Y TK+ + QN++S+ ++ PEN+G D T I ++G KGE NV
Sbjct: 33 GWSLYQYINTESVTCLNESVPGSVKNCFKPYSERASTDKYLESNEDDEQLILYIPFTGAVKITNICVVGGSNGSSPSKLKVWKNRDDIDFSVADDLEPLQDFDLQE-DPIGE-------VNYTTKITRFQNITSLTMYFPENFGEDFTRIYYIGLKGEFKNV 186
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: L8GL73_ACACA (Thioredoxin family Trp26 family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL73_ACACA) HSP 1 Score: 159 bits (401), Expect = 9.070e-46 Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 1
Query: 22 HEDAGGNRHNHDDCEGCEECGGHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGE 558
H G H H + E +SL+ +IDT + CLNE G+V + KPW +R + +ES D D QLIIH+PFT +K+KAIN++GG GT+P L+ W+NR+D+DFS+ +D+ P Q EL+ + ++YPT++ K QNV+S+ L++PEN+GA++T IS++G KGE
Sbjct: 5 HHHGGSCAHEHTEEPEKERGAEYSLYQYIDTGGLTCLNERGSGTVAKVFKPWDQRLDRTAVVES-DTDEQLIIHIPFTASIKLKAINIIGGADGTSPGKLKAWINREDIDFSSVDDVAPTQEWELSENP--------QGEIEYPTRITKFQNVTSLTLYIPENFGAERTIISYIGLKGE 174
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: I0YIF8_COCSC (DUF1000-domain-containing protein n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YIF8_COCSC) HSP 1 Score: 155 bits (393), Expect = 1.230e-44 Identity = 85/175 (48.57%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 46 HNHDDCEGCEECG-GHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRREL-EPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETT 564
H+HD CE ECG SL ID + + LNE+ GSV +PW R +L +P L SNDDDP+L+IHVPF VKIKAI+++GG GTAP LR + NRDD+DFS DLPP+Q +L + ++YPT+V K V SI L++P N+GAD T I F+G KGE T
Sbjct: 6 HDHD-CE-ASECGPAWSLHEHIDHSNIAALNEAQAGSVRSVFRPWAERLDLSQPTLNSNDDDPELLIHVPFNGSVKIKAISIIGGADGTAPLQLRAYTNRDDLDFSLVADLPPVQQWDLQEN--------LTGQIEYPTQVPKFSGVHSIDLYIPSNFGADSTRIHFIGLKGEFT 170
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A5B8MHL0_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MHL0_9CHLO) HSP 1 Score: 154 bits (388), Expect = 7.180e-44 Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 61 CEGCEECGGHS------LFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETT 564
C +CG H L F+DT +VR LNE GS + W R + C S +DDP+LIIHVPFT VK+K+I V+GG T+P +L+V++NR+DVDF+NA DLPP+Q EL + +Y TK K Q VSSI ++ PE+YG +QT I F+GFKGE T
Sbjct: 6 CAHDHDCGDHDCGSMWRLNQFVDTPKVRALNEEVQGSCKELFRGWEERLDRSKCCSSEEDDPELIIHVPFTCDVKLKSICVIGGLDDTSPKLLKVFLNREDVDFTNASDLPPVQEWELLEDP--------NGVFEYNTKFRKFQAVSSITMYFPESYGGNQTKIHFIGFKGEAT 171
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A7S2X4Z0_9CHLO (Hypothetical protein n=3 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2X4Z0_9CHLO) HSP 1 Score: 154 bits (388), Expect = 9.330e-44 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 1
Query: 46 HNHDDCEGCEECGGH-SLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETT 564
H+HD C+ E CG L +IDT +VR LNE PGS + W R +L C S +DDP++IIHVPFT VK+K+I+V+GG GT+P+ L+V++NRDDVDF+NA DLP Q EL A M+Y TK K Q V++I +F PE + DQT + F+GFKGE T
Sbjct: 17 HDHD-CD-AENCGAMWCLHQYIDTDKVRALNEEVPGSCKDLFRSWEDRLDLTKCCSSEEDDPEIIIHVPFTCDVKLKSISVIGGSEGTSPSRLKVFLNRDDVDFTNAGDLPATQEWELVED--------ARGVMEYNTKFTKFQAVNTITMFFPECFLGDQTRLHFIGFKGEAT 180
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A7I4CCX7_PHYPA (PITH domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4CCX7_PHYPA) HSP 1 Score: 150 bits (380), Expect = 9.990e-43 Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 1
Query: 46 HNHDDCEGCEECGGHSLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRELEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETTNV 570
H HD CE E G SL+ ID T V LNE+ GS KPW +R +L L SNDDD +LI+ +PFT VKIK+I VVGG G +P+ +R ++NRDD+DFS A DL P+Q ELA + ++YPTK K Q V+S+ L P N+GAD T + ++G +GE T +
Sbjct: 6 HQHD-CEEYECAGDWSLYKNIDITGVTALNETVEGSAKSVFKPWEQRSDLSTVLASNDDDAELIVFIPFTTDVKIKSICVVGGVDGHSPSKMRAFLNRDDIDFSQANDLTPVQEWELAEN--------IRGELEYPTKYAKFQGVASLTLHFPSNFGADATHVHYIGLRGEATQM 171
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Match: A0A0D6QX95_ARACU (PITH domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QX95_ARACU) HSP 1 Score: 149 bits (377), Expect = 3.090e-42 Identity = 78/177 (44.07%), Postives = 113/177 (63.84%), Query Frame = 1
Query: 46 HNHDDCEGCEECGGH-SLFGFIDTTRVRCLNESTPGSVLRCIKPWTRRRE-LEPCLESNDDDPQLIIHVPFTQVVKIKAINVVGGRGGTAPAILRVWVNRDDVDFSNAEDLPPLQTIELANSDAVAASGAADSAMDYPTKVNKTQNVSSIALFVPENYGADQTCISFLGFKGETTNV 570
HNH CE ECG SL+ ID RV LNES GSV K W R + CLESN+DDP+LI+++PFT VKIK+I+V+GG GT+P+ +R ++NRD +DFS+A+++ P+Q ELA + ++Y TK ++ Q V+++ L PEN+GA+ T I ++G +GE T +
Sbjct: 5 HNHS-CEE-HECGSQWSLYKHIDFPRVSALNESVAGSVKAVFKSWDHRLDNSSECLESNEDDPELIVYIPFTSDVKIKSISVIGGTEGTSPSRMRAFINRDGIDFSDAQEMAPVQEWELAEN--------VQGELEYQTKYSRFQGVANLTLHFPENFGAETTKIIYIGLRGEATQI 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5330.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5330.1.1 >prot_P-wetherbeei_contig5330.1.1 ID=prot_P-wetherbeei_contig5330.1.1|Name=mRNA_P-wetherbeei_contig5330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=190bp MGDCREAHEDAGGNRHNHDDCEGCEECGGHSLFGFIDTTRVRCLNESTPGback to top mRNA from alignment at P-wetherbeei_contig5330:136..883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5330.1.1 ID=mRNA_P-wetherbeei_contig5330.1.1|Name=mRNA_P-wetherbeei_contig5330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=748bp|location=Sequence derived from alignment at P-wetherbeei_contig5330:136..883- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5330:136..883- >mRNA_P-wetherbeei_contig5330.1.1 ID=mRNA_P-wetherbeei_contig5330.1.1|Name=mRNA_P-wetherbeei_contig5330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=570bp|location=Sequence derived from alignment at P-wetherbeei_contig5330:136..883- (Phaeothamnion wetherbeei SAG_119_79)back to top |