mRNA_P-wetherbeei_contig53204.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI001BE1CEA7 (ABC transporter permease n=1 Tax=Dyadobacter sp. CECT 9623 TaxID=2823330 RepID=UPI001BE1CEA7) HSP 1 Score: 303 bits (776), Expect = 3.920e-99 Identity = 159/177 (89.83%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 1 HQQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYAL 531
HQQK+AHQQVHDQ MSQPNRHPHRVAHYGY+VFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQT++GLKQNGVLKILLCQ+ASY DIL+GKTAGLTAV WALFLPLLL+SLIAGNLLITG+ ETLLR +LL LYAL
Sbjct: 50 HQQKNAHQQVHDQWMSQPNRHPHRVAHYGYMVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTISGLKQNGVLKILLCQKASYLDILIGKTAGLTAVVWALFLPLLLVSLIAGNLLITGEIQGETLLRTLLLTFLYAL 226
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI001F1EB27E (DUF3526 domain-containing protein n=2 Tax=unclassified Dyadobacter TaxID=2625061 RepID=UPI001F1EB27E) HSP 1 Score: 295 bits (754), Expect = 1.750e-95 Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 1
Query: 1 HQQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYA 528
HQQK AHQ+VHDQ MSQPNRHPHRVAHYGY+VFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVA LK NGVLK+LLCQ ASY DIL+GK GLTAV WALFLPLLL+SL+AGNLLITGD S E LLR++LL ILYA
Sbjct: 77 HQQKAAHQEVHDQWMSQPNRHPHRVAHYGYMVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVASLKLNGVLKLLLCQSASYLDILIGKITGLTAVVWALFLPLLLVSLLAGNLLITGDMSAEALLRVLLLTILYA 252
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI0004217E83 (DUF3526 domain-containing protein n=1 Tax=Dyadobacter alkalitolerans TaxID=492736 RepID=UPI0004217E83) HSP 1 Score: 291 bits (746), Expect = 1.350e-94 Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 1
Query: 4 QQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYF 537
QQK AH+QVHDQ MSQPNRHPHRVAHYGY+VFR+KSPLSFFDFGLDS+VGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIF+GFQTVAGLKQNGVLKILLCQRASY DIL+GKTAGLTAV W LFLPLLL LIAGNLLI G S + L+RI LL +YALYF
Sbjct: 52 QQKAAHEQVHDQWMSQPNRHPHRVAHYGYMVFRQKSPLSFFDFGLDSFVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFVGFQTVAGLKQNGVLKILLCQRASYLDILMGKTAGLTAVVWVLFLPLLLSVLIAGNLLIDGQISQDALVRIALLTTVYALYF 229
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: A0A5M8QCE9_9BACT (DUF3526 domain-containing protein n=2 Tax=Dyadobacter TaxID=120831 RepID=A0A5M8QCE9_9BACT) HSP 1 Score: 287 bits (734), Expect = 8.450e-93 Identity = 150/175 (85.71%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 1 HQQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILY 525
HQQK AH QVHDQ M+QP+RHPHRVAHYGY+VFREKSPLSFFDFGLDSYVGN+VFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKI+LCQRAS+ DIL+GKTAG+T V W LFLPLLLL LIAGNLLI G + + LLRI+LL ILY
Sbjct: 50 HQQKTAHHQVHDQWMNQPDRHPHRVAHYGYMVFREKSPLSFFDFGLDSYVGNAVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKIMLCQRASFLDILIGKTAGITGVVWILFLPLLLLCLIAGNLLIAGGINADALLRIMLLTILY 224
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI00166A1083 (DUF3526 domain-containing protein n=1 Tax=Dyadobacter endophyticus TaxID=1749036 RepID=UPI00166A1083) HSP 1 Score: 286 bits (731), Expect = 2.460e-92 Identity = 149/179 (83.24%), Postives = 162/179 (90.50%), Query Frame = 1
Query: 4 QQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYFL 540
QQ+ AHQ+VHDQ M+QP+RHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMA VLQLLVPLFIIF+GFQTVAGLK NGVLK+LLCQRASY D+L+GK AGLTAV WALFLP+LL L+AGNLLI ETLLRI+L+ LYA+YFL
Sbjct: 52 QQRSAHQEVHDQWMNQPDRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAFVLQLLVPLFIIFVGFQTVAGLKPNGVLKLLLCQRASYLDVLLGKAAGLTAVTWALFLPVLLAGLVAGNLLIADSFEAETLLRILLIVTLYAVYFL 230
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: C6W189_DYAFD (ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / CIP 107007 / KCTC 52180 / NS114) TaxID=471854 RepID=C6W189_DYAFD) HSP 1 Score: 279 bits (714), Expect = 8.700e-90 Identity = 145/176 (82.39%), Postives = 160/176 (90.91%), Query Frame = 1
Query: 4 QQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYAL 531
QQ+ AHQ+VHDQ M+QPNRHPHRVAHYGY+VFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMV+QLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASY D+L+GKTAGLTAV W LF+P L+LSL+AG ++ +G S + LRI L+ LYAL
Sbjct: 51 QQQAAHQEVHDQWMNQPNRHPHRVAHYGYMVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVMQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYLDVLLGKTAGLTAVTWVLFVPFLVLSLVAGTVITSGGFSADAALRIALIVGLYAL 226
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI0019579CEA (DUF3526 domain-containing protein n=1 Tax=Dyadobacter sandarakinus TaxID=2747268 RepID=UPI0019579CEA) HSP 1 Score: 275 bits (703), Expect = 3.830e-88 Identity = 142/172 (82.56%), Postives = 155/172 (90.12%), Query Frame = 1
Query: 25 QVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYFL 540
+VH Q MSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNT+NMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTV+GLK+NGVLKILLCQRASY D+LVGKTAGLTAV W+LFLPLL+L L AG L+ G + + +RIVL+ YA+YFL
Sbjct: 58 EVHKQWMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTLNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVSGLKENGVLKILLCQRASYMDVLVGKTAGLTAVTWSLFLPLLILGLAAGITLVPGSAAADMAIRIVLIVFSYAVYFL 229
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: UPI001F192933 (DUF3526 domain-containing protein n=1 Tax=Dyadobacter sp. CY312 TaxID=2907303 RepID=UPI001F192933) HSP 1 Score: 273 bits (698), Expect = 2.230e-87 Identity = 142/175 (81.14%), Postives = 157/175 (89.71%), Query Frame = 1
Query: 16 AHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYFL 540
A ++VHD M+QP RHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGF TV+GLKQNGVLKILLCQRA+Y+DIL+GKT GLTAV W LFLPLLLLSL AG + ++ +TE+ LR+ L+ +LY LYFL
Sbjct: 55 AREEVHDHWMNQPERHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFHTVSGLKQNGVLKILLCQRATYFDILLGKTIGLTAVTWVLFLPLLLLSLFAGIVSLSNGINTESFLRVGLILLLYGLYFL 229
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: A0A2N7B5H2_9BACT (ABC transporter permease n=1 Tax=Siphonobacter sp. BAB-5405 TaxID=1864825 RepID=A0A2N7B5H2_9BACT) HSP 1 Score: 268 bits (685), Expect = 2.010e-85 Identity = 136/175 (77.71%), Postives = 155/175 (88.57%), Query Frame = 1
Query: 16 AHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYFL 540
AHQQV+DQ MSQP+RHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGN+VFLEAHRQNT+N+SEA FSNGMLRFGELSMA+VLQLLVPL IIFIGF T+AGLKQNGVLKILLCQRASY+D+LVGKTAGLTA W LFLPL+L+SL G+ ++G + LRI+++ YA+YFL
Sbjct: 55 AHQQVYDQWMSQPDRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNAVFLEAHRQNTINLSEASFSNGMLRFGELSMALVLQLLVPLLIIFIGFPTIAGLKQNGVLKILLCQRASYFDLLVGKTAGLTAAIWILFLPLILISLFVGSFFLSGKIGVDNTLRILIIVSSYAVYFL 229
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Match: A0A4U6D625_9BACT (DUF3526 domain-containing protein n=1 Tax=Dyadobacter frigoris TaxID=2576211 RepID=A0A4U6D625_9BACT) HSP 1 Score: 267 bits (683), Expect = 4.010e-85 Identity = 140/178 (78.65%), Postives = 156/178 (87.64%), Query Frame = 1
Query: 4 QQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQLLVPLFIIFIGFQTVAGLKQNGVLKILLCQRASYWDILVGKTAGLTAVCWALFLPLLLLSLIAGNLLITGDTSTETLLRIVLLAILYALYF 537
QQ+ A +VH+ M+QP RHPHRVAHYGYLVFREKSPLSFFDFGLDSY GNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQ+LVPLFIIFIGF +VAGLKQNGVLKILLCQRASY DIL+GKT GLTAV W LFLPLLL SL G + + G+ S+E+L+RI ++ +LY LYF
Sbjct: 51 QQEAARDEVHEHWMNQPERHPHRVAHYGYLVFREKSPLSFFDFGLDSYAGNSVFLEAHRQNTVNMSEAGFSNGMLRFGELSMAMVLQILVPLFIIFIGFHSVAGLKQNGVLKILLCQRASYLDILLGKTFGLTAVIWVLFLPLLLFSLFVGIVSLAGNFSSESLMRIGMIVLLYGLYF 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53204.1.1 >prot_P-wetherbeei_contig53204.1.1 ID=prot_P-wetherbeei_contig53204.1.1|Name=mRNA_P-wetherbeei_contig53204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp HQQKHAHQQVHDQRMSQPNRHPHRVAHYGYLVFREKSPLSFFDFGLDSYVback to top mRNA from alignment at P-wetherbeei_contig53204:1..540- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53204.1.1 ID=mRNA_P-wetherbeei_contig53204.1.1|Name=mRNA_P-wetherbeei_contig53204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig53204:1..540- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53204:1..540- >mRNA_P-wetherbeei_contig53204.1.1 ID=mRNA_P-wetherbeei_contig53204.1.1|Name=mRNA_P-wetherbeei_contig53204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig53204:1..540- (Phaeothamnion wetherbeei SAG_119_79)back to top |