mRNA_P-wetherbeei_contig53203.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53203.1.1
Unique NamemRNA_P-wetherbeei_contig53203.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1F3A5H1_9PROT (Hemin receptor n=2 Tax=Bacteria TaxID=2 RepID=A0A1F3A5H1_9PROT)

HSP 1 Score: 260 bits (664), Expect = 1.520e-87
Identity = 132/140 (94.29%), Postives = 136/140 (97.14%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEAAREMPRAA 420
            MTPHQIKLVQTSFAQV PIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLS LDTLLPAVRALGQRHAGYGVSAE+YVPVG+ALLWTLEKGLG+ FTAETR AWATAYRVLAGTMIEAAREMP+AA
Sbjct:    1 MTPHQIKLVQTSFAQVVPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSHLDTLLPAVRALGQRHAGYGVSAEQYVPVGSALLWTLEKGLGEAFTAETRGAWATAYRVLAGTMIEAAREMPKAA 140          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1H8YFV1_9PROT (Nitric oxide dioxygenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8YFV1_9PROT)

HSP 1 Score: 219 bits (559), Expect = 1.550e-71
Identity = 112/140 (80.00%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEAAREMPRAA 420
            MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAP VRAMFPDDL  QKKKLMAMLGTAVAGLS L+TL+P V+ALG+RHAGYGV A  Y  VG+ALLWTLEKGLG+ FT E RDAWAT Y VL+ TM+ AA E P AA
Sbjct:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPHVRAMFPDDLREQKKKLMAMLGTAVAGLSHLETLVPVVQALGRRHAGYGVKAPHYASVGSALLWTLEKGLGEAFTPEVRDAWATTYIVLSTTMMNAANEKPMAA 140          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A521LVT0_9HYPH (Hemin receptor n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LVT0_9HYPH)

HSP 1 Score: 187 bits (474), Expect = 1.060e-58
Identity = 92/132 (69.70%), Postives = 104/132 (78.79%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEA 396
            MTP QI+LVQTSF +V PIA TAADLFYGRLFEIAPEVR MFP+D+  QK KLMAMLGTAV  L +L+T+LPAV+ALG+RH GYGV+A  Y PVGAALLWTLEKGLG  FT + + AW   Y  LAG M  A
Sbjct:    1 MTPQQIELVQTSFKKVVPIAGTAADLFYGRLFEIAPEVRPMFPEDMREQKTKLMAMLGTAVTNLHKLETILPAVKALGERHKGYGVTAAHYAPVGAALLWTLEKGLGPDFTPDVKAAWTETYTALAGVMTSA 132          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A512NG40_9HYPH (Hemoglobin n=2 Tax=Reyranella TaxID=445219 RepID=A0A512NG40_9HYPH)

HSP 1 Score: 185 bits (469), Expect = 6.120e-58
Identity = 93/132 (70.45%), Postives = 102/132 (77.27%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEA 396
            MTP QI LVQ+SF +V PIA TAADLFY RLFEIAPEVR+MFP DLS QKKKLMAMLGTAV  L +LDT+LPAV+ LG RH GYGV+A  Y PVGAALLWTLEKGLG  FT E + AW   Y  L+G M  A
Sbjct:    1 MTPQQIDLVQSSFKKVVPIAGTAADLFYDRLFEIAPEVRSMFPQDLSEQKKKLMAMLGTAVGSLHKLDTILPAVKDLGARHKGYGVTAAHYAPVGAALLWTLEKGLGPDFTPEVKAAWTETYTALSGVMTSA 132          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A521QZ00_9HYPH (Hemin receptor n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QZ00_9HYPH)

HSP 1 Score: 183 bits (464), Expect = 3.530e-57
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEA 396
            MTP QI+LVQTSF +V PIA TAADLFY RLFE APEVRA+FP D+  QK KLMAMLGTAV+ L +LD +LPAV+ALG+RH GYGV+A  Y PVGAALLWTLE+GLG  FT E ++AW   Y  LAG M  A
Sbjct:    1 MTPQQIELVQTSFKKVVPIAGTAADLFYDRLFETAPEVRALFPQDMKEQKVKLMAMLGTAVSSLHKLDEILPAVKALGERHKGYGVTAAHYAPVGAALLWTLEQGLGPDFTPEVKEAWTLTYTALAGVMTSA 132          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1T4QK71_9HYPH (Hemoglobin-like flavoprotein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4QK71_9HYPH)

HSP 1 Score: 182 bits (461), Expect = 1.010e-56
Identity = 92/132 (69.70%), Postives = 101/132 (76.52%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEA 396
            MTP QI LVQTSF +V PIA TAADLFY RLFEIAP VRA+FP DLS QKKKLMAML TAV  L RLD +LPAV+ALG+RH  YGV+ + Y PVGAALLWTLE+GLGD FT ET+ AW   Y  LA  M  A
Sbjct:    1 MTPQQIALVQTSFQKVVPIAGTAADLFYNRLFEIAPGVRALFPADLSEQKKKLMAMLATAVTNLHRLDAILPAVKALGERHRSYGVADDHYAPVGAALLWTLEQGLGDDFTPETKAAWTEVYTALAAVMTAA 132          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1F2ZZF5_9PROT (Hemin receptor n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZZF5_9PROT)

HSP 1 Score: 181 bits (460), Expect = 1.440e-56
Identity = 91/132 (68.94%), Postives = 102/132 (77.27%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEA 396
            MTP +I+LVQTSF +V PIAATAADLFY RLFEIAPEVR MFP D+  QK KLM MLGTAV+ L +L+T+LPAV+AL +RH GYGV+A  Y PVGAALLWTLEKGLG  FT E   AW   Y  LAG MI A
Sbjct:    1 MTPEKIELVQTSFKKVVPIAATAADLFYDRLFEIAPEVRPMFPQDMKEQKSKLMGMLGTAVSNLHQLETILPAVKALAERHKGYGVTAAHYAPVGAALLWTLEKGLGADFTPEVEAAWTETYTTLAGAMIGA 132          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1G5UJD6_9HYPH (Hemoglobin-like flavoprotein n=3 Tax=Methylobacterium TaxID=407 RepID=A0A1G5UJD6_9HYPH)

HSP 1 Score: 179 bits (455), Expect = 9.720e-56
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEAARE 405
            MTP Q+K VQ SFA+V PIA TAADLFYGRLFEIAP+VRA+FP+D++ QK+KLMAMLG AVA L+  +T++PA++ LG++H  YG  A  Y PVGAALLWTLE+GLG  FT E R+AWA  YR++AG M +AA +
Sbjct:    1 MTPEQVKCVQDSFAKVRPIAGTAADLFYGRLFEIAPQVRALFPEDMTEQKQKLMAMLGLAVANLNHPETVVPALQDLGRKHVAYGTQAAHYAPVGAALLWTLEQGLGSDFTPEVREAWAETYRLVAGVMQQAAAD 135          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: UPI001FBC1320 (globin domain-containing protein n=1 Tax=Methylobacterium sp. E-016 TaxID=2836556 RepID=UPI001FBC1320)

HSP 1 Score: 179 bits (453), Expect = 2.020e-55
Identity = 87/138 (63.04%), Postives = 106/138 (76.81%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTMIEAAREMPR 414
            MTPHQ+KLVQ SF +V PIA  AADLFYGRLFEIAP+VR MFPDD+  QKKKLMAMLG AVA L + +T++PA+++LG++H  +G  A  Y PVGAALLWTLE+GLG  FT E R+AW   Y ++A TM  AA E+ R
Sbjct:    1 MTPHQVKLVQESFGKVRPIAEAAADLFYGRLFEIAPQVRPMFPDDMKEQKKKLMAMLGLAVANLDKPETVVPALQSLGRQHVAFGTQAAHYEPVGAALLWTLEQGLGPEFTPEVREAWVETYGIVADTMKAAAAELQR 138          
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Match: A0A1H8U6M1_9PROT (Hemoglobin-like flavoprotein n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8U6M1_9PROT)

HSP 1 Score: 178 bits (452), Expect = 2.370e-55
Identity = 89/129 (68.99%), Postives = 98/129 (75.97%), Query Frame = 1
Query:    1 MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQKKKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLWTLEKGLGDGFTAETRDAWATAYRVLAGTM 387
            MTP QI LVQ+SF +V PIA TAADLFY RLFEIAP+VR +FP DL  QKKKLMAML TAV+ L +LDT+LPAV+ LG RH GYGV+A  Y PVG ALLWTLEKGLG  FT E R AW   Y  LAG M
Sbjct:    1 MTPQQIDLVQSSFKKVVPIAGTAADLFYDRLFEIAPDVRPLFPQDLGEQKKKLMAMLSTAVSNLHKLDTILPAVKDLGNRHKGYGVTAAHYAPVGTALLWTLEKGLGADFTPEVRAAWTDTYTALAGVM 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53203.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3A5H1_9PROT1.520e-8794.29Hemin receptor n=2 Tax=Bacteria TaxID=2 RepID=A0A1... [more]
A0A1H8YFV1_9PROT1.550e-7180.00Nitric oxide dioxygenase n=2 Tax=Alphaproteobacter... [more]
A0A521LVT0_9HYPH1.060e-5869.70Hemin receptor n=1 Tax=Reyranella sp. TaxID=192929... [more]
A0A512NG40_9HYPH6.120e-5870.45Hemoglobin n=2 Tax=Reyranella TaxID=445219 RepID=A... [more]
A0A521QZ00_9HYPH3.530e-5768.18Hemin receptor n=1 Tax=Reyranella sp. TaxID=192929... [more]
A0A1T4QK71_9HYPH1.010e-5669.70Hemoglobin-like flavoprotein n=1 Tax=Enhydrobacter... [more]
A0A1F2ZZF5_9PROT1.440e-5668.94Hemin receptor n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A1G5UJD6_9HYPH9.720e-5663.70Hemoglobin-like flavoprotein n=3 Tax=Methylobacter... [more]
UPI001FBC13202.020e-5563.04globin domain-containing protein n=1 Tax=Methyloba... [more]
A0A1H8U6M1_9PROT2.370e-5568.99Hemoglobin-like flavoprotein n=1 Tax=Rhodospirilla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53203contigP-wetherbeei_contig53203:17..439 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1096546.WYO_1422
PFAMsGlobin
Model size423
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.31e-55
EggNOG OGsCOG1017@1|root,COG1017@2|Bacteria,1QVJP@1224|Proteobacteria,2U5M6@28211|Alphaproteobacteria,1JW3I@119045|Methylobacteriaceae
DescriptionGlobin
Cds size423
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186796.864587-CDS-P-wetherbeei_contig53203:16..4391683186796.864587-CDS-P-wetherbeei_contig53203:16..439Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53203 17..439 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53203.1.1prot_P-wetherbeei_contig53203.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53203 17..439 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53203.1.1

>prot_P-wetherbeei_contig53203.1.1 ID=prot_P-wetherbeei_contig53203.1.1|Name=mRNA_P-wetherbeei_contig53203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp
MTPHQIKLVQTSFAQVAPIAATAADLFYGRLFEIAPEVRAMFPDDLSGQK
KKLMAMLGTAVAGLSRLDTLLPAVRALGQRHAGYGVSAEKYVPVGAALLW
TLEKGLGDGFTAETRDAWATAYRVLAGTMIEAAREMPRAA*
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mRNA from alignment at P-wetherbeei_contig53203:17..439+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53203.1.1 ID=mRNA_P-wetherbeei_contig53203.1.1|Name=mRNA_P-wetherbeei_contig53203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig53203:17..439+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACACCGCATCAGATCAAGCTCGTGCAGACGAGCTTCGCCCAGGTCGC CCCCATTGCCGCCACCGCCGCCGATCTTTTCTACGGCCGGCTGTTCGAGA TCGCGCCTGAGGTGCGAGCGATGTTTCCCGACGATCTCTCGGGCCAGAAG AAGAAGTTGATGGCCATGCTGGGCACCGCCGTCGCCGGTCTCAGCCGTCT CGACACGCTTCTGCCGGCGGTGCGCGCGCTCGGCCAGCGGCATGCCGGCT ATGGCGTCAGCGCCGAGAAGTACGTGCCGGTCGGCGCGGCACTGCTGTGG ACCCTGGAGAAGGGGCTGGGCGATGGCTTCACCGCCGAAACCCGCGACGC CTGGGCCACCGCCTACCGGGTGCTGGCCGGGACGATGATCGAGGCTGCCC GCGAGATGCCTAGGGCTGCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53203:17..439+

>mRNA_P-wetherbeei_contig53203.1.1 ID=mRNA_P-wetherbeei_contig53203.1.1|Name=mRNA_P-wetherbeei_contig53203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig53203:17..439+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACACCGCATCAGATCAAGCTCGTGCAGACGAGCTTCGCCCAGGTCGC
CCCCATTGCCGCCACCGCCGCCGATCTTTTCTACGGCCGGCTGTTCGAGA
TCGCGCCTGAGGTGCGAGCGATGTTTCCCGACGATCTCTCGGGCCAGAAG
AAGAAGTTGATGGCCATGCTGGGCACCGCCGTCGCCGGTCTCAGCCGTCT
CGACACGCTTCTGCCGGCGGTGCGCGCGCTCGGCCAGCGGCATGCCGGCT
ATGGCGTCAGCGCCGAGAAGTACGTGCCGGTCGGCGCGGCACTGCTGTGG
ACCCTGGAGAAGGGGCTGGGCGATGGCTTCACCGCCGAAACCCGCGACGC
CTGGGCCACCGCCTACCGGGTGCTGGCCGGGACGATGATCGAGGCTGCCC
GCGAGATGCCTAGGGCTGCGTGA
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