mRNA_P-wetherbeei_contig5320.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A2R5G7K9_9STRA (Chaperone protein dnaJ 13 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7K9_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.160e-11 Identity = 64/206 (31.07%), Postives = 90/206 (43.69%), Query Frame = 1
Query: 4 AAAQVRLMLRTARRKRQREEETGGLIIYEAKYGRELHVDCGQTWYMDPAV--------------AAGDADGNEEDGRGSSXXXXXXXXGGDTADLFSPA---KRPPNIDVTIQVQFFVKGSSLRLPP-RSKAGLLGFYREADAIFDVHNVFGWRASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVLPSPEAQYIG 567
A Q+R+M A KR + E + GL+I A+YGR LH +C M+P + + D D EE + L PA + PPNIDVT+Q+ +F K ++L L SKA LLGFY A + P A+L++RY+ VYE+T D +P+ +PS A IG
Sbjct: 559 ALLQMRIMASVAESKRAKAEASSGLVILCARYGRALHEECDWRPVMEPEMGDFVQRETTRPRLPSDWDMDAAEEAEAAQAAAAEEVVRPPHDPSL-GPAPYEEHPPNIDVTLQLNYFSKENALELHSGTSKANLLGFYNPCLAT-------------PSAP----------ARLFVRYKIGSWVYEVTCDDLEPLEIPSVRAVLIG 740
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A4D9D2Z6_9STRA (J domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2Z6_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.650e-9 Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 1
Query: 1 DAAAQVRLMLRTARRKRQREEET----GGLIIYEAKYGREL---HVDCGQTWYMDPAVAAGDADGNEEDGRGSSXXXXXXXXGGDTADLFSPAKRPPNIDVTIQVQFFVKGSSLRLPPRSKAGLLGFY---READAIFDVHNVFGW----RASKAA-----RPGHGTGGEGEG-AQLWIRYEFAGRVYEITVQDCDPVVLPSPEAQY 561
+AAAQVRLM + RK Q E+ GGL+I EA+YG WY+ + D R +DV + +QFF S L+LPP SKAG+LGFY ++D ++S AA RP + + +L++RY + G+VYE+TV D +P+ LP ++ +
Sbjct: 432 NAAAQVRLMDEASIRKAQVEKSAMKGLGGLVILEARYGTSSMPQKAPPDPEWYLL------------------------------SRDKEQALDRATALDVRVPLQFFANKSRLQLPPGSKAGMLGFYDVSANPTWLYDPSTSSDGSEPDKSSAAAFRAPLRPPRPPEAKTKARTRLYVRYSYLGKVYEVTVDDIEPLELPPMDSSH 608
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A7S2S647_9STRA (Hypothetical protein (Fragment) n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S647_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 6.330e-9 Identity = 68/204 (33.33%), Postives = 92/204 (45.10%), Query Frame = 1
Query: 4 AAAQVRLMLRTARRKRQREEETGGLIIYEAKYGRELHVDCGQTWYMDPAVAAGD----------ADGNEEDGRGSSXXXXXXXXGGDTADLFSPA-----KRPPNIDVTIQVQFFVKGSSLRLPP-RSKAGLLGFYREADAIFDVHNVFGWRASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVLPSPEAQYIG 567
A Q+ +M + A ++ +E GL++ A+YG LH +C P++ + +D +E + XXXXXXXX D + PPNIDVT Q+ FF K SL L +SKA LLGFY +P +L+IRY+ A VYEITV D +PV LPS A IG
Sbjct: 147 AKMQMEIMSKKAELNVKQAKEKYGLVVLRARYGYRLHEECDWRDVQAPSLEKLEKLEASRPRLPSDWDEPEXXXXXXXXXXXXXXXXXXDQQASTLQVYNSHPPNIDVTTQLNFFSKEDSLELHGGKSKAQLLGFYNPC------------LGKPCVQP-----------ELYIRYQLASWVYEITVDDIEPVRLPSHRATLIG 327
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A7S0GBS1_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GBS1_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.890e-6 Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = 1
Query: 271 NIDVTIQVQFFVKGSSLRLPPRSKAGLLGFYR--------------EADAIFDVHNVFGWR-----ASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVLPSPEAQYI 564
++D TIQ+QF+V S+LRLP +K+G+LGFY ++ +I +V K G T + L+I+Y F G+V+E+TVQD + V LPS A+ I
Sbjct: 355 SLDATIQLQFWVVDSTLRLPSSTKSGMLGFYDLTTVTDTPMLEKTDDSTSIPKTLSVMEMMRQLCYGEKMTDTGTATNQQ---PLLYIQYSFGGKVFELTVQDDEAVALPSALAKQI 468
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A7S3RZ78_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RZ78_EMIHU) HSP 1 Score: 54.3 bits (129), Expect = 2.220e-5 Identity = 35/91 (38.46%), Postives = 43/91 (47.25%), Query Frame = 1
Query: 274 IDVTIQVQFFVKGSSLRLPPRSKAGLLGF--YREADAIFDVHNVFGWRASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVL 540
+DV + +QF V SSLRLP SKAGL GF R A D H +LW+RYE AG V + V+D PV+L
Sbjct: 207 LDVRVALQFAVSRSSLRLPAGSKAGLRGFATVRPAPLTADGHRA--------------------PCELWLRYEIAGEVRTLCVEDAAPVLL 277
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: R1BSE4_EMIHU (J domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BSE4_EMIHU) HSP 1 Score: 54.3 bits (129), Expect = 2.850e-5 Identity = 35/91 (38.46%), Postives = 43/91 (47.25%), Query Frame = 1
Query: 274 IDVTIQVQFFVKGSSLRLPPRSKAGLLGF--YREADAIFDVHNVFGWRASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVL 540
+DV + +QF V SSLRLP SKAGL GF R A D H +LW+RYE AG V + V+D PV+L
Sbjct: 331 LDVRVALQFAVSRSSLRLPAGSKAGLRGFASVRPAPLTADGHRA--------------------PCELWLRYEIAGEVRTLCVEDAAPVLL 401
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Match: A0A7S3XUL5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUL5_HETAK) HSP 1 Score: 52.4 bits (124), Expect = 6.980e-5 Identity = 37/103 (35.92%), Postives = 48/103 (46.60%), Query Frame = 1
Query: 271 NIDVTIQVQFFVKGSSLRLPP-RSKAGLLGFY---READAIFDVHNVFGWRASKAARPGHGTGGEGEGAQLWIRYEFAGRVYEITVQDCDPVVLPSPEAQYIG 567
NIDVT+Q+QFFVK S L LP +SK+ LLGFY R A +L++RY + G YE+ D V LPS +A +G
Sbjct: 114 NIDVTVQLQFFVKNSELLLPAGQSKSLLLGFYDAARHAREYGRASAAXXXXXXXXXXXXXXXXXXXXXPRLFVRYRYKGTAYELEAGDYQGVRLPSLDASALG 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5320.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5320.2.1 >prot_P-wetherbeei_contig5320.2.1 ID=prot_P-wetherbeei_contig5320.2.1|Name=mRNA_P-wetherbeei_contig5320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MLRTARRKRQREEETGGLIIYEAKYGRELHVDCGQTWYMDPAVAAGDADGback to top mRNA from alignment at P-wetherbeei_contig5320:659..1780+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5320.2.1 ID=mRNA_P-wetherbeei_contig5320.2.1|Name=mRNA_P-wetherbeei_contig5320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig5320:659..1780+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5320:659..1780+ >mRNA_P-wetherbeei_contig5320.2.1 ID=mRNA_P-wetherbeei_contig5320.2.1|Name=mRNA_P-wetherbeei_contig5320.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig5320:659..1780+ (Phaeothamnion wetherbeei SAG_119_79)back to top |