prot_P-wetherbeei_contig5320.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5320.1.1
Unique Nameprot_P-wetherbeei_contig5320.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length69
Homology
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BLAST of mRNA_P-wetherbeei_contig5320.1.1 vs. uniprot
Match: A0A835YTL3_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTL3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.030e-8
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:    1 MRVGLKVGSNGVFVVLKLSRGGTRFALPVRIGSALDPWTILAASVVPAVVDAVV 54
            ++VG KVG  GV VVL+  RGG RF LP+ + +A DP +IL  +VVPA VDA +
Sbjct:  594 VKVGCKVGVQGVTVVLRFQRGGMRFHLPILLSAACDPLSILVGAVVPAAVDAAI 647
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5320.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTL3_9STRA6.030e-853.70J domain-containing protein n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5320contigP-wetherbeei_contig5320:231..437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5320.1.1mRNA_P-wetherbeei_contig5320.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5320 210..437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5320.1.1 ID=prot_P-wetherbeei_contig5320.1.1|Name=mRNA_P-wetherbeei_contig5320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp
MRVGLKVGSNGVFVVLKLSRGGTRFALPVRIGSALDPWTILAASVVPAVV
DAVVYGLLLAAKQPVALR*
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