prot_P-wetherbeei_contig5314.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5314.1.1
Unique Nameprot_P-wetherbeei_contig5314.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length187
Homology
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A6H5JMC0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC0_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.890e-41
Identity = 94/204 (46.08%), Postives = 110/204 (53.92%), Query Frame = 0
Query:   43 TEPAGGDDSCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPD------------------------------------------------------VDGLPATPG--LPVRMAAA---EALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            T+P G D  CSLRGL+WK+LLG +H D+MLYIRLV +G S  D KIR+DTFRT   DEEF+RRV EDKLSR+NNA+VRLN PD                                                       DG  A  G   P    A    E  VG G  G YVQGM +LCAPLLFVMPEVDAF+CF++LL +H+P
Sbjct:  187 TDP-GEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAADTVRRGSEGQGREGSGSKDKHGGEEQPPKSEDVPRCSNPAIVHKDGAGAEAGGAAPASGGATGEREERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMP 389          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: D8LM02_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM02_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.390e-40
Identity = 90/201 (44.78%), Postives = 105/201 (52.24%), Query Frame = 0
Query:   47 GGDDSCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLP------------------------------------------------------------ATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            G D  CSLRGL+WK+LLG +H D+MLYIRLV +G S  D KIR+DTFRT   DEEF+RRV EDKLSR+NNA+VRLN PD  G P                                                            A P         E  VG G  G YVQGM +LCAPLLFVMPEVDAF+CF++LL +H+P
Sbjct:  162 GEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPD-GGAPVAATAAADTXXXXXXXXXXXXXXXNDKHGGEEHPPKSEDVPRCSNSSIVDKEGAGAEAGGAAPATGGATGEGEERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMP 361          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A225VL10_9STRA (Rab-GAP TBC domain-containing protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VL10_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.630e-34
Identity = 83/188 (44.15%), Postives = 109/188 (57.98%), Query Frame = 0
Query:    4 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDDS---CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LR++Y  LL    GD+     ER + L+R+V++ GLP + E  G D +   CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + PG   +     A  G      YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:   10 LRQQYDTLLA---GDSITADYERWRELKRLVIVHGLPRD-EGFGTDSNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPGEEKQEDGEHARGGNLPSIRYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 186          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A2P4Y951_9STRA (Bub2 protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y951_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.700e-34
Identity = 84/191 (43.98%), Postives = 109/191 (57.07%), Query Frame = 0
Query:    4 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDDS------CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LRE+Y ALL    GD+     ER + L+R+V++ GLP + E  G D        CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + PG   +     A  G      YVQGM +LCAPLL+V+PE +A+  F  L+ RH P
Sbjct:    6 LREQYDALLA---GDSITADYERWRELKRLVIVHGLPRD-EGFGSDAEGLNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPGEDKQNDGEHARGGNLPSIRYVQGMNVLCAPLLYVLPEPEAYHIFCQLIVRHCP 185          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: W2HKV9_PHYPR (Rab-GAP TBC domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2HKV9_PHYPR)

HSP 1 Score: 131 bits (329), Expect = 6.110e-34
Identity = 84/190 (44.21%), Postives = 111/190 (58.42%), Query Frame = 0
Query:    4 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTE----TEPAGGDDS-CSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LR++Y ALL    GD      ER + L+R+V++ GLP +    T+  G + S CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L ++PG   +     A  G      YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:   13 LRQQYDALLA---GDPITADYERWRELKRLVIVHGLPRDEGFATDIEGSNASLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFI-------NELGSSPGEEKQEDGDNARNGNLPSIRYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 192          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A5D6XHK7_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHK7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.090e-32
Identity = 83/195 (42.56%), Postives = 106/195 (54.36%), Query Frame = 0
Query:    4 LREEYLALLQRR----DGDAAAPAG-ERVKALRRMVLLQGLPTETEPAGGD-----DSCSLRGLIWKLLLGA-MHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LR  Y+ALLQ      + DA   +   R + L+RMV+  GLP +   A  D      +CSLRG IWKL LG    +D   Y  L  +GAS  D  IR+DTFRT RGD  F +RVPE+KL+RL N F+              G      A++   G   +  YVQGM ILCAPLL+VMPE DA++ F  L+ +H P
Sbjct:   10 LRRRYVALLQHEAVVDENDALIESDYARWRELKRMVIAFGLPRDEAAAASDADPCGTTCSLRGRIWKLFLGVDAAVDREQYAALAARGASPFDGDIRNDTFRTFRGDPAFAQRVPEEKLARLLNVFIN-----------ELGTGGAHDASQVGEGHPEHIRYVQGMNILCAPLLYVMPEADAYYTFRQLVMKHCP 193          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A3M6VHR9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHR9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.410e-31
Identity = 83/201 (41.29%), Postives = 115/201 (57.21%), Query Frame = 0
Query:    4 LREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETE--PAGGDDSCSLRGLIWKLLLGAMH-IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPD------VDGLPATPG-LPV-------RMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LR++Y ALL     D+     ER + L+R+V+++GLP + +  P      CSLRG +WK  LG  + +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+     D      ++G  A  G LP+       +  + E +  +  +  YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:    5 LRQQYDALLA---DDSITSDYERWRELKRLVIVKGLPRDEDSTPDANSSLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDPEFAQRVPEEKLVRLLNVFINELGSDPGDEKQIEGKHAHGGNLPLIRFENKSKNKSVEVVKMI--FLSYVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 200          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A8K1FBB6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBB6_PYTOL)

HSP 1 Score: 127 bits (318), Expect = 2.390e-31
Identity = 89/209 (42.58%), Postives = 108/209 (51.67%), Query Frame = 0
Query:    4 LREEYLALLQRRDGDAAAPAGERV--------KALRRMVLLQGLP---------------TETEPAGGDDSCSLRGLIWKLLLGAMH--IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            LR  Y ALL+   GD       RV        + L+RM ++ GLP               T TE   G+D CSLRG IWK  LG     ID + Y  LV+QGAS  D  IR+DTFRT RGD +F  RVPE KL RL NAF    F ++D   ++P L               Y  YVQGM +LCAPLL+VMPE DA+  F  L+ +H P
Sbjct:   18 LRRRYQALLR---GDPVIGPENRVIDAAYDRWRELKRMAIVYGLPRDEGLFFPTLEDNNTTRTEN-NGEDGCSLRGRIWKRFLGVEDATIDVLRYQELVQQGASHYDADIRNDTFRTFRGDAKFAERVPEGKLVRLLNAF----FNELDAGNSSPDLDQA-----------DYIRYVQGMNVLCAPLLYVMPEEDAYHTFCQLILKHCP 207          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A6A3MEJ8_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MEJ8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.020e-31
Identity = 83/188 (44.15%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    3 ALREEYLALLQRRDGDAAAPAG-ERVKALRRMVLLQGLPTETEPAGGDDS-CSLRGLIWKLLLGA-MHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            ALR++Y ALL    GD    +  ER + L+R+V++ GLP +    G   S C+LRG +WK  LG    +D   Y  LV +GAS  D  IR+DTFRT RGD EF +RVPE+KL RL N F+       + L + P    +    E    L S   YVQGM +LCAPLL+V+PE DA+  F  L+ RH P
Sbjct:    9 ALRQQYDALLD--GGDTPITSDYERWRELKRLVIVHGLPRDE---GSTPSLCTLRGRVWKAFLGVESDVDMTKYSALVGRGASHYDGDIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI-------NELGSNPDRDEKKEDGELGGNLPSIR-YVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCP 183          
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Match: A0A2D4C5Z1_PYTIN (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5Z1_PYTIN)

HSP 1 Score: 120 bits (302), Expect = 8.930e-31
Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   33 MVLLQGLPTETEPAGGDDS-----CSLRGLIWKLLLGAMH--IDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDEEFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGSYGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP 187
            MV++ GLP +  P  GD       C LRG +WK L G     +D   Y RL+ QGAS  D  IR+DTFRT RGD +F +RVPE KL RL NAF      D                 E   G   Y  YVQG+ +LCAPLL+VMPE +A+F F  L+ +H P
Sbjct:    1 MVIVFGLPRQEAPTTGDPDGEQTRCLLRGRVWKALXGIQDGDVDXAHYERLIAQGASRYDADIRNDTFRTFRGDAKFAQRVPEHKLVRLLNAFFNELHEDA-------------TEEEERTGAFEYIRYVQGINVLCAPLLYVMPEAEAYFTFRHLILKHCP 149          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5314.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMC0_9PHAE1.890e-4146.08Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D8LM02_ECTSI1.390e-4044.78Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A225VL10_9STRA1.630e-3444.15Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A2P4Y951_9STRA2.700e-3443.98Bub2 protein n=1 Tax=Phytophthora palmivora var. p... [more]
W2HKV9_PHYPR6.110e-3444.21Rab-GAP TBC domain-containing protein n=8 Tax=Phyt... [more]
A0A5D6XHK7_9STRA5.090e-3242.56Rab-GAP TBC domain-containing protein n=1 Tax=Pyth... [more]
A0A3M6VHR9_9STRA1.410e-3141.29Rab-GAP TBC domain-containing protein n=1 Tax=Pero... [more]
A0A8K1FBB6_PYTOL2.390e-3142.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3MEJ8_9STRA4.020e-3144.15Rab-GAP TBC domain-containing protein n=3 Tax=Phyt... [more]
A0A2D4C5Z1_PYTIN8.930e-3143.83Rab-GAP TBC domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 53..183
e-value: 1.3E-10
score: 41.3
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 49..187
score: 14.354101
NoneNo IPR availableGENE3D1.10.8.270putative rabgap domain of human tbc1 domain family member 14 like domainscoord: 68..187
e-value: 4.9E-15
score: 57.5
NoneNo IPR availablePANTHERPTHR22957:SF263MITOTIC CHECK POINT PROTEIN BUB2coord: 24..182
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 24..182
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 52..122
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 153..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5314contigP-wetherbeei_contig5314:2..934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5314.1.1mRNA_P-wetherbeei_contig5314.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5314 2..934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5314.1.1 ID=prot_P-wetherbeei_contig5314.1.1|Name=mRNA_P-wetherbeei_contig5314.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
NKALREEYLALLQRRDGDAAAPAGERVKALRRMVLLQGLPTETEPAGGDD
SCSLRGLIWKLLLGAMHIDAMLYIRLVEQGASWSDWKIRDDTFRTLRGDE
EFQRRVPEDKLSRLNNAFVRLNFPDVDGLPATPGLPVRMAAAEALVGLGS
YGGYVQGMTILCAPLLFVMPEVDAFFCFHALLTRHIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf