mRNA_P-wetherbeei_contig12383.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A351T472_9PROT (FliMN_C domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T472_9PROT) HSP 1 Score: 115 bits (289), Expect = 2.400e-32 Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 1
Query: 4 MKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQSQ 231
MKAIDSVK+EVSVVLG+A+MPIHQLLKMGRGAVIELE+LQ DPV+++AN R IA+GEIMIQG+ IAVSI DLV S+
Sbjct: 1 MKAIDSVKVEVSVVLGRAVMPIHQLLKMGRGAVIELETLQNDPVMVYANNRRIAKGEIMIQGDGIAVSILDLVNSE 76
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A317E3P8_9PROT (FliMN_C domain-containing protein n=1 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317E3P8_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 5.070e-23 Identity = 48/73 (65.75%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 MKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLV 222
M A+ V I++SVVLGQ+ MPIHQLLKMGRGAVIEL+S +++PV+I AN +LIARGEI+I GE IAVS+ +L+
Sbjct: 1 MSAVGEVYIDISVVLGQSTMPIHQLLKMGRGAVIELDSRESEPVMILANGKLIARGEIVISGEHIAVSVTELL 73
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A8I1UQL2_9PROT (Flagellar motor switch protein FliN n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1UQL2_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 5.070e-23 Identity = 46/72 (63.89%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 13 IDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQS 228
ID VK+E+SVVLG++++P+HQLL+MGRGAVIEL S Q DPVL+ AN R +A+GEI+I G+ IAVSI +L+Q+
Sbjct: 5 IDKVKVEISVVLGRSVIPMHQLLRMGRGAVIELNSHQEDPVLVLANDRPVAKGEIVINGDKIAVSITELLQN 76
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A845QC18_9HYPH (Flagellar motor switch protein FliN n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QC18_9HYPH) HSP 1 Score: 89.4 bits (220), Expect = 8.390e-22 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 1
Query: 4 MKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQ 225
M AID V++E+SVVLG+A MPIHQLLKMGRGAVIELE+ +++ V + AN + IARGEI++QGE + VSI +++Q
Sbjct: 1 MNAIDKVEVEISVVLGKASMPIHQLLKMGRGAVIELEAHESEEVWLLANNQPIARGEIVVQGEHVGVSITEVLQ 74
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A846N2S6_9PROT (Flagellar motor switch protein FliN/FliY n=1 Tax=Rhizomicrobium palustre TaxID=189966 RepID=A0A846N2S6_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 1.190e-21 Identity = 45/75 (60.00%), Postives = 64/75 (85.33%), Query Frame = 1
Query: 1 MMKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQ 225
M+ I +VK+E+SVVLG++++P+HQLL+MGRGAVIEL++ Q DPVLI AN + IARGEI+IQG+ I VS+ +L++
Sbjct: 1 MLGNISNVKVEISVVLGRSVIPMHQLLRMGRGAVIELDTNQDDPVLILANDKPIARGEIVIQGDKIGVSVLELLR 75
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A177QDN8_9PROT (FliMN_C domain-containing protein n=1 Tax=Rhizomicrobium sp. SCGC AG-212-E05 TaxID=1799655 RepID=A0A177QDN8_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 1.190e-21 Identity = 43/71 (60.56%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 13 IDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQ 225
+D+VK+E+SVVLG++++P+HQLL+MGRGAVIEL+S Q DPV I AN + +A+GEI IQG+ IAVS+ +L++
Sbjct: 5 VDNVKVEISVVLGRSVIPMHQLLRMGRGAVIELDSNQDDPVTILANDKPVAKGEIQIQGDKIAVSVVELLR 75
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: UPI001423416E (flagellar motor switch protein FliN n=1 Tax=Rhizomicrobium electricum TaxID=480070 RepID=UPI001423416E) HSP 1 Score: 89.0 bits (219), Expect = 1.190e-21 Identity = 43/75 (57.33%), Postives = 64/75 (85.33%), Query Frame = 1
Query: 1 MMKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQ 225
M+ + +VK+E+SVVLG++++P+HQLL+MGRGAVIEL++ Q DPVLI AN + +ARGEI+IQG+ I VS+ +L++
Sbjct: 1 MLNNLQNVKVEISVVLGRSVIPMHQLLRMGRGAVIELDASQDDPVLILANDKPVARGEIIIQGDRIGVSVLELLK 75
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A8I1S0I9_9PROT (Flagellar motor switch protein FliN n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1S0I9_9PROT) HSP 1 Score: 88.2 bits (217), Expect = 2.340e-21 Identity = 42/72 (58.33%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 13 IDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQS 228
+D+VK+ +SVVLG++++P+HQLL+MGRGAVIEL+S Q DPVL+ AN + +A+GEI I G+ IAVS+ DL+++
Sbjct: 5 VDNVKVAISVVLGRSVIPMHQLLRMGRGAVIELDSHQDDPVLVLANDKPVAKGEIQISGDRIAVSVVDLLRN 76
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: A0A317DTK1_9PROT (FliMN_C domain-containing protein n=2 Tax=Zavarzinia compransoris TaxID=1264899 RepID=A0A317DTK1_9PROT) HSP 1 Score: 87.8 bits (216), Expect = 3.410e-21 Identity = 45/73 (61.64%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 4 MKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLV 222
M A+ V I++SVVLGQ+ MPIHQLLKMGRGAVIEL++ +++PV+I AN R IARGEI++ G+ IAVS+ +L+
Sbjct: 1 MSAVGEVFIDISVVLGQSTMPIHQLLKMGRGAVIELDAKESEPVMILANGRPIARGEIVLSGDRIAVSVTELL 73
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Match: X5MNP9_9HYPH (Flagellar motor switch protein FliN n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MNP9_9HYPH) HSP 1 Score: 86.3 bits (212), Expect = 1.390e-20 Identity = 44/74 (59.46%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 4 MKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANKRLIARGEIMIQGEAIAVSIRDLVQ 225
M AI+ V +E+SVVLG+A MPIHQLLKMGRGAVIEL++ +T+ V + AN + IARGEI++QG+ + VSI +++Q
Sbjct: 1 MSAIEKVDVEISVVLGKATMPIHQLLKMGRGAVIELDAGETEEVWLLANNQPIARGEIVVQGDHVGVSITEVLQ 74 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12383.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12383.2.1 >prot_P-wetherbeei_contig12383.2.1 ID=prot_P-wetherbeei_contig12383.2.1|Name=mRNA_P-wetherbeei_contig12383.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=78bp MMKAIDSVKIEVSVVLGQAIMPIHQLLKMGRGAVIELESLQTDPVLIFANback to top mRNA from alignment at P-wetherbeei_contig12383:774..1007+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12383.2.1 ID=mRNA_P-wetherbeei_contig12383.2.1|Name=mRNA_P-wetherbeei_contig12383.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig12383:774..1007+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12383:774..1007+ >mRNA_P-wetherbeei_contig12383.2.1 ID=mRNA_P-wetherbeei_contig12383.2.1|Name=mRNA_P-wetherbeei_contig12383.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=234bp|location=Sequence derived from alignment at P-wetherbeei_contig12383:774..1007+ (Phaeothamnion wetherbeei SAG_119_79)back to top |