mRNA_P-wetherbeei_contig53102.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig53102.1.1
Unique NamemRNA_P-wetherbeei_contig53102.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A7K1B740_9ACTN (Glycosyltransferase n=2 Tax=root TaxID=1 RepID=A0A7K1B740_9ACTN)

HSP 1 Score: 164 bits (415), Expect = 2.860e-44
Identity = 76/98 (77.55%), Postives = 85/98 (86.73%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAAGIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRLRERHPRLAWPS 294
            WDPDLLVHGA++DAMAMFRRD + ELGGY + A GI+GWEDYDLWL++AERG RA L   VVGRYRE AGSMRK+SDIDMA+NFV LRERHPRL WPS
Sbjct:  547 WDPDLLVHGAYIDAMAMFRRDAWRELGGY-SVAEGIYGWEDYDLWLTVAERGRRASLVTGVVGRYREQAGSMRKISDIDMASNFVVLRERHPRLPWPS 643          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A539E1S7_9ACTN (Family 2 glycosyl transferase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E1S7_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 6.920e-42
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAAGIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRLRERHPRLAWPS 294
            WD DLLVHGA++DAMA+FRR+ ++ELGGY A   GI+GWEDYDLWL  AE G RA L  ++VGRYRE  GSMRK+SDIDMA+NFV LRERHPRL WPS
Sbjct:  216 WDVDLLVHGAYIDAMALFRRESWSELGGY-AADDGIYGWEDYDLWLRAAEHGQRASLVTAIVGRYREQPGSMRKISDIDMASNFVTLRERHPRLPWPS 312          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A7J9YWZ9_9ACTN (Glycosyltransferase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YWZ9_9ACTN)

HSP 1 Score: 90.5 bits (223), Expect = 1.890e-18
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAAGIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRLRERHPRL 282
            W+P+ L +  ++DA+A+ RR VF ++GGY +T A + GWEDYDLW ++AERG R       V RYR  AGSM + + I +     RL ERHPRL
Sbjct:  225 WEPERLTYDNYIDALALTRRGVFDQVGGY-STEAELHGWEDYDLWCTLAERGMRGAHVREFVARYRIGAGSMIQFTGISIDDAKARLVERHPRL 317          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A2V6DMD6_9BACT (Glyco_trans_2-like domain-containing protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6DMD6_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 2.520e-17
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAA--GIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRL-RERHPRLA 285
            WDP++LV G ++DAMAMFRRDV  +LGGYD T +  G FGWEDYD+WL  A++        +++  YR+H  SM   +++  A   V L +ER+  LA
Sbjct:  728 WDPEILVQGPYVDAMAMFRRDVLLKLGGYDHTLSEIGWFGWEDYDMWLRFAQQDLHVGFVPNILCLYRQHETSMINTTNL-FARELVELFQERYQSLA 824          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A2V6D677_9BACT (Glyco_trans_2-like domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6D677_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 1.100e-16
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAA--GIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRL-RERHPRLA 285
            WD ++LV G ++DAMAMFRRDV   LGGYD T +  G FGWEDYD+WL  A+R        +++  YR+H  SM   +++  A + V L +ER+  LA
Sbjct:  150 WDKEILVQGPYVDAMAMFRRDVLLALGGYDHTLSEIGWFGWEDYDMWLRFAQRDLPVGFVPNILCLYRQHETSMINTTNL-FARDLVGLFQERYQLLA 246          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A2V6CRN6_9BACT (Glyco_trans_2-like domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6CRN6_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 5.060e-16
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAA--GIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRL-RERHPRLA 285
            WD ++LV G ++DAMAMFRRDV   LGGYD T +  G FGWEDYD+WL  A+R        +++  YR+H  SM   +++  A + V L +ER+  LA
Sbjct:  450 WDKEILVQGPYVDAMAMFRRDVLLALGGYDHTLSEIGWFGWEDYDMWLRFAQRDLPVGFVPNILCLYRQHETSMINTTNL-FARDLVGLFQERYQLLA 546          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A2V6FYY2_9BACT (Glyco_trans_2-like domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6FYY2_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 5.490e-16
Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAA--GIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRL-RERHPRLA 285
            WD ++LV G ++DAMAMFRRDV   LGGYD T +  G FGWEDYD+WL  A+R        +++  YR+H  SM   +++  A + V L +ER+  LA
Sbjct:  730 WDKEILVQGPYVDAMAMFRRDVLLALGGYDHTLSEIGWFGWEDYDMWLRFAQRDLPVGFVPNILCLYRQHETSMINTTNL-FARDLVGLFQERYQLLA 826          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A7K1B815_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B815_9ACTN)

HSP 1 Score: 77.8 bits (190), Expect = 1.090e-15
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  306 TEQQLRARVAELEALLEARTHTIVSLAATVAELQGTGASTAIGKLRDAERQIEALHNTKLYRYAAVPRRWYATLR 530
            TE +LRARVAELEALLEART TIV L A +AELQG        ++R  E ++  L  TK+ RY+A+PRRWYA LR
Sbjct:    9 TELELRARVAELEALLEARTQTIVGLGARLAELQGDAPPPLTERVRQLEAELAQLRATKVLRYSALPRRWYAALR 83          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A838V993_9ACTN (Glycosyltransferase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A838V993_9ACTN)

HSP 1 Score: 83.6 bits (205), Expect = 1.770e-15
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAAGIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDIDMAANFVRLRERHPRLA 285
            W+P  L  G ++DAMAM RR     +GGY +T   ++GWEDY LWL++AE+G+     A  V RYR+ A SM  +S+ID  A +  L  R P+L+
Sbjct:  532 WEPARLRQGNYIDAMAMLRRPALEAIGGY-STDPALYGWEDYALWLAMAEKGYEGAHVADFVARYRKSAHSMIGLSNIDHTAAWGALLRRFPQLS 625          
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Match: A0A2V6JFM1_9BACT (Glyco_trans_2-like domain-containing protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6JFM1_9BACT)

HSP 1 Score: 81.3 bits (199), Expect = 6.010e-15
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 1
Query:    1 WDPDLLVHGAFMDAMAMFRRDVFAELGGYDATAA--GIFGWEDYDLWLSIAERGWRADLTASVVGRYREHAGSMRKVSDI 234
            WDP++LV   ++DAMA+FRR    ELGGYD T +  G FGWEDY++WL  A RG+      + +  YR H  SM   +++
Sbjct:  210 WDPEILVQSPYIDAMALFRRATLLELGGYDCTLSRIGWFGWEDYEMWLRFAARGFSVGFVPNTLCFYRHHDKSMSNTTNL 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53102.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B740_9ACTN2.860e-4477.55Glycosyltransferase n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A539E1S7_9ACTN6.920e-4271.43Family 2 glycosyl transferase (Fragment) n=1 Tax=A... [more]
A0A7J9YWZ9_9ACTN1.890e-1847.87Glycosyltransferase n=1 Tax=Solirubrobacterales ba... [more]
A0A2V6DMD6_9BACT2.520e-1745.92Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A2V6D677_9BACT1.100e-1645.92Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A2V6CRN6_9BACT5.060e-1645.92Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A2V6FYY2_9BACT5.490e-1645.92Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A7K1B815_9ACTN1.090e-1558.67Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A838V993_9ACTN1.770e-1544.21Glycosyltransferase n=1 Tax=Solirubrobacterales ba... [more]
A0A2V6JFM1_9BACT6.010e-1545.00Glyco_trans_2-like domain-containing protein n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig53102contigP-wetherbeei_contig53102:2..540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog98439.AJLL01000089_gene3714
PFAMsGlycos_transf_2
Model size539
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.25e-11
EggNOG OGsCOG1215@1|root,COG1215@2|Bacteria,1GQJV@1117|Cyanobacteria
DescriptionGlycosyltransferase like family 2
Cds size264
COG categoryM
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186795.3702347-UTR-P-wetherbeei_contig53102:1..341683186795.3702347-UTR-P-wetherbeei_contig53102:1..34Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig53102 2..34 +
1683186795.3916898-UTR-P-wetherbeei_contig53102:298..5401683186795.3916898-UTR-P-wetherbeei_contig53102:298..540Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig53102 299..540 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186795.3821757-CDS-P-wetherbeei_contig53102:34..2981683186795.3821757-CDS-P-wetherbeei_contig53102:34..298Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig53102 35..298 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig53102.1.1prot_P-wetherbeei_contig53102.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig53102 35..298 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig53102.1.1

>prot_P-wetherbeei_contig53102.1.1 ID=prot_P-wetherbeei_contig53102.1.1|Name=mRNA_P-wetherbeei_contig53102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp
MDAMAMFRRDVFAELGGYDATAAGIFGWEDYDLWLSIAERGWRADLTASV
VGRYREHAGSMRKVSDIDMAANFVRLRERHPRLAWPS*
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mRNA from alignment at P-wetherbeei_contig53102:2..540+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig53102.1.1 ID=mRNA_P-wetherbeei_contig53102.1.1|Name=mRNA_P-wetherbeei_contig53102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=539bp|location=Sequence derived from alignment at P-wetherbeei_contig53102:2..540+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGATCCGGACCTGCTCGTGCACGGGGCGTTCATGGACGCGATGGCGAT GTTCCGTCGCGACGTGTTCGCCGAGCTCGGTGGCTACGACGCCACGGCGG CCGGCATCTTCGGCTGGGAGGACTACGACCTCTGGCTGTCGATCGCCGAA CGCGGCTGGCGTGCTGACCTGACGGCGAGCGTCGTCGGCCGCTACCGTGA GCACGCGGGCTCGATGCGCAAGGTGAGCGACATTGACATGGCAGCGAATT TCGTCCGGCTCCGAGAGCGTCACCCGAGGTTGGCATGGCCCAGTTAGACG TGCAGACGGAACAGCAGCTGCGAGCCAGGGTCGCCGAGCTCGAAGCGCTG TTGGAAGCGCGCACGCACACGATCGTCTCGCTGGCTGCGACGGTGGCCGA GCTGCAGGGCACGGGTGCATCGACGGCGATCGGCAAGCTGCGCGACGCAG AGCGTCAGATCGAGGCGCTGCACAACACCAAGCTGTATCGCTACGCGGCA GTGCCCCGTCGTTGGTACGCCACCCTTCGCGAGACCCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig53102:2..540+

>mRNA_P-wetherbeei_contig53102.1.1 ID=mRNA_P-wetherbeei_contig53102.1.1|Name=mRNA_P-wetherbeei_contig53102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig53102:2..540+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGCGATGGCGATGTTCCGTCGCGACGTGTTCGCCGAGCTCGGTGG
CTACGACGCCACGGCGGCCGGCATCTTCGGCTGGGAGGACTACGACCTCT
GGCTGTCGATCGCCGAACGCGGCTGGCGTGCTGACCTGACGGCGAGCGTC
GTCGGCCGCTACCGTGAGCACGCGGGCTCGATGCGCAAGGTGAGCGACAT
TGACATGGCAGCGAATTTCGTCCGGCTCCGAGAGCGTCACCCGAGGTTGG
CATGGCCCAGTTAG
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