mRNA_P-wetherbeei_contig53086.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: UPI0019FB4499 (Dihydroxy-acid dehydratase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FB4499) HSP 1 Score: 262 bits (670), Expect = 7.290e-87 Identity = 114/159 (71.70%), Postives = 137/159 (86.16%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
+K PE LRSHRW GV+D+RSFGHRSR KQMGY RED+AGKPVI I+NTW+D+N CH+HFKQRV+E+KRGVWQAGGFPVE+P M++ E KPT+MLYRN L+ME EE +RC+P+DG VL+GGCDKT P LLMGA + +LPAIF+PAGPMLRG+WR TL
Sbjct: 6 KKKPEDLRSHRWYGVHDLRSFGHRSRAKQMGYGREDWAGKPVIAIINTWSDINPCHTHFKQRVEEIKRGVWQAGGFPVELPAMSLSEPFVKPTTMLYRNMLAMETEELLRCHPIDGAVLLGGCDKTTPALLMGALTMDLPAIFVPAGPMLRGNWRGETL 164
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A1G8MNP3_9BURK (Dihydroxy-acid dehydratase (Fragment) n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1G8MNP3_9BURK) HSP 1 Score: 258 bits (658), Expect = 6.250e-86 Identity = 114/159 (71.70%), Postives = 134/159 (84.28%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
RKTPE+LRSHRW GVND+RSFGHRSRT QMGY+RE++AGKPVI ILNTW+++N CH+HFKQRV+EVKRG+WQAGGFP+E+P + E KPT+MLYRNFL+ME EE +R P DGVVLMGGCDKT P LLMGA S +LP IF+PAGPML G+W TL
Sbjct: 4 RKTPEELRSHRWYGVNDLRSFGHRSRTAQMGYSREEYAGKPVIAILNTWSEMNPCHTHFKQRVEEVKRGIWQAGGFPIELPVQTLSEPFQKPTTMLYRNFLAMEAEETLRSYPADGVVLMGGCDKTTPALLMGAISMDLPTIFLPAGPMLSGNWNGATL 162
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A3C0YE10_9BURK (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A3C0YE10_9BURK) HSP 1 Score: 259 bits (663), Expect = 1.390e-85 Identity = 117/159 (73.58%), Postives = 133/159 (83.65%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
RKTPEQLRSHRW GV D+RSFGHRSRT QMGY R D+AGKPVI I+NTW+D+N CHSHFKQRV+EVKRG+WQAGGFPVE+P M++ E KPT+MLYRN L++E EE +R P DG VLMGGCDKT P L+MGA S NLPAIFMPAGPMLRG+W TL
Sbjct: 6 RKTPEQLRSHRWYGVKDLRSFGHRSRTAQMGYHRSDYAGKPVIAIINTWSDINPCHSHFKQRVEEVKRGIWQAGGFPVEMPAMSLSEPFQKPTTMLYRNLLALETEELLRSYPADGCVLMGGCDKTTPALIMGAISMNLPAIFMPAGPMLRGNWNGVTL 164
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: UPI001F122817 (dihydroxy-acid dehydratase n=3 Tax=Paraburkholderia TaxID=1822464 RepID=UPI001F122817) HSP 1 Score: 260 bits (664), Expect = 3.090e-85 Identity = 115/159 (72.33%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
RKTPE+LRSHRW GVND+RSFGHRSRT QMGY+RE++AGKPVI ILNTW+++N CH+HFKQRV+EVKRG+WQAGGFP+E+P + E KPT+MLYRNFL+ME EE +R P DGVVLMGGCDKT P LLMGA S +LP IF+PAGPMLRG+W TL
Sbjct: 1 RKTPEELRSHRWYGVNDLRSFGHRSRTAQMGYSREEYAGKPVIAILNTWSEMNPCHTHFKQRVEEVKRGIWQAGGFPIELPVQTLSEPFQKPTTMLYRNFLAMEAEETLRSYPADGVVLMGGCDKTTPALLMGAISMDLPTIFLPAGPMLRGNWNGATL 159
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A0S8DEE3_9PROT (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8DEE3_9PROT) HSP 1 Score: 254 bits (650), Expect = 1.190e-84 Identity = 114/159 (71.70%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
+K PE LRSHRWLG D+RSFGHRSRT QMG+ARED+ GKPVIGILNTWND++ CHSHF++RV +VKRGVWQAGGFPVEIP +++ E KPT+M+YRN L+ME EE +R P+DG VLMGGCDKT PGL+MGA S NLP+IFMPAGPMLRG+W+ TL
Sbjct: 4 KKKPESLRSHRWLGATDLRSFGHRSRTLQMGFAREDYEGKPVIGILNTWNDVSHCHSHFRERVVDVKRGVWQAGGFPVEIPAISLAEVFQKPTTMMYRNLLAMETEELLRSYPIDGCVLMGGCDKTPPGLMMGAISMNLPSIFMPAGPMLRGNWQGKTL 162
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A2D9JRA4_9GAMM (Dihydroxy-acid dehydratase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JRA4_9GAMM) HSP 1 Score: 267 bits (683), Expect = 1.960e-84 Identity = 120/158 (75.95%), Postives = 139/158 (87.97%), Query Frame = 1
Query: 4 KTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
K+ E+LRSHRW GV+ MR+FGHRSRT +MG++R+DF GKPVIGI+NTW+D NTCHSH +QR +EVKRGVWQAGGFPVE+P M+VGEQMTKPTSMLYRNFL+ME EE +R PVDG VLMGGCDKT PGLLMGAAS +LPAI++PAG MLRGHWR TL
Sbjct: 3 KSKEELRSHRWFGVDTMRAFGHRSRTYEMGFSRDDFEGKPVIGIVNTWSDTNTCHSHMRQRAEEVKRGVWQAGGFPVELPAMSVGEQMTKPTSMLYRNFLAMETEELLRSQPVDGCVLMGGCDKTTPGLLMGAASMDLPAIYVPAGAMLRGHWRGETL 160
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A519FS56_9BURK (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A519FS56_9BURK) HSP 1 Score: 253 bits (647), Expect = 2.970e-84 Identity = 114/155 (73.55%), Postives = 133/155 (85.81%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWR 465
RK PE LRSHRW GV D+RSFGHRSRT QMG++R+D+ GKPVI ILNTW+D+N+CH+HFKQRV+EVKRGVWQAGGFPVEIP M++GE KPT+MLYRN L+ME EE IR P DGVVLMGGCDKT PGL+MGA + NLP IF+PAGPMLRG ++
Sbjct: 11 RKRPEDLRSHRWYGVKDLRSFGHRSRTAQMGFSRDDYLGKPVIAILNTWSDMNSCHTHFKQRVEEVKRGVWQAGGFPVEIPAMSLGEAFQKPTTMLYRNLLAMEAEELIRSYPADGVVLMGGCDKTTPGLVMGALANNLPTIFVPAGPMLRGDYK 165
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A4Q2XYI9_9BACT (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2XYI9_9BACT) HSP 1 Score: 261 bits (666), Expect = 4.660e-84 Identity = 118/159 (74.21%), Postives = 134/159 (84.28%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
RKTPEQLRS RW G +D+RSFGHRSR KQMGY+ EDF GKPVIGILNTW+DLNTCH+HF++R EVKRGVWQAGGFPVEIP + E KPTSM YRN ++MEVEE +RC P+DGVVLMGGCDKTVP LLMGA +ANLP IF+PAGPM++G WR TL
Sbjct: 10 RKTPEQLRSWRWFGPDDLRSFGHRSRAKQMGYSSEDFTGKPVIGILNTWSDLNTCHTHFRERAQEVKRGVWQAGGFPVEIPITTLSEMFMKPTSMFYRNMVAMEVEETLRCYPLDGVVLMGGCDKTVPALLMGAFTANLPCIFLPAGPMMKGCWRGTTL 168
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A2V7UDK3_9BACT (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UDK3_9BACT) HSP 1 Score: 256 bits (654), Expect = 9.880e-84 Identity = 114/159 (71.70%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
RK PE LRSHRW G +D+RSF HRSRTKQ G+ +D+AGKPVI ILNTW+D N+CH+HF+QR +EVKRGVWQAGGFP+E+P ++VGE KPT+MLYRN L+ME EE +R NPVDG VLMGGCDKTVPGL+MGA S NLPAIF+PAGPMLRG+WR+ L
Sbjct: 5 RKKPEDLRSHRWFGRDDLRSFTHRSRTKQAGFTTDDWAGKPVIAILNTWSDANSCHAHFRQRAEEVKRGVWQAGGFPLEMPVLSVGETYMKPTTMLYRNLLAMEAEEILRANPVDGAVLMGGCDKTVPGLVMGATSMNLPAIFLPAGPMLRGNWRDQVL 163
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Match: A0A7W1QTN3_9BACT (Dihydroxy-acid dehydratase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1QTN3_9BACT) HSP 1 Score: 258 bits (658), Expect = 3.810e-83 Identity = 114/159 (71.70%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 1 RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNDLNTCHSHFKQRVDEVKRGVWQAGGFPVEIPCMAVGEQMTKPTSMLYRNFLSMEVEEQIRCNPVDGVVLMGGCDKTVPGLLMGAASANLPAIFMPAGPMLRGHWREHTL 477
+K+PEQLRSHRW G +D+RSFGHRSR+KQMGYA +DF GKPVI I+NTW+DL CHSHF++R +EVKRGVWQAGGFPVE+P M+V E KP+ M+YRNFL+ME EE +R PVDGVVLMGGCDKT PGLLMGA S N+PAI++PAGPMLRG+W TL
Sbjct: 4 KKSPEQLRSHRWFGASDLRSFGHRSRSKQMGYAADDFQGKPVIAIINTWSDLAPCHSHFRERAEEVKRGVWQAGGFPVELPAMSVSETYMKPSPMMYRNFLAMETEELLRSQPVDGVVLMGGCDKTTPGLLMGAISMNVPAIYLPAGPMLRGNWNGQTL 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig53086.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig53086.1.1 >prot_P-wetherbeei_contig53086.1.1 ID=prot_P-wetherbeei_contig53086.1.1|Name=mRNA_P-wetherbeei_contig53086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp RKTPEQLRSHRWLGVNDMRSFGHRSRTKQMGYAREDFAGKPVIGILNTWNback to top mRNA from alignment at P-wetherbeei_contig53086:65..541+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig53086.1.1 ID=mRNA_P-wetherbeei_contig53086.1.1|Name=mRNA_P-wetherbeei_contig53086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig53086:65..541+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig53086:65..541+ >mRNA_P-wetherbeei_contig53086.1.1 ID=mRNA_P-wetherbeei_contig53086.1.1|Name=mRNA_P-wetherbeei_contig53086.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig53086:65..541+ (Phaeothamnion wetherbeei SAG_119_79)back to top |