mRNA_P-wetherbeei_contig529.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A6H5JA16_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA16_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.840e-41 Identity = 128/388 (32.99%), Postives = 173/388 (44.59%), Query Frame = 1
Query: 448 RNAAVIPLLMQLLPRWEADVQRALLAALRRLLRG-GGGLVNKSVCCNTSPPLLDFLLDRFPDADAAGAS-------LMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVH-GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEGPSGGSGSAGAAARY---------SPCLYSFM-TGTGIGVEAFLVPSDDGGSVGDXXXXXXXXXXXXXXXXXXXXXXXRGSDGAQRRSYAINLRTTRGGXXXXXXXXXXXXXXXXXXXXXXTLQVGDGLRESLIAEETWVFVAISHWGPSLGKKGGAIALIDAAAFRHECAFPRFGSHSVPRASIAC 1554
RN V+PL+ QLLP W A Q +L + LL+G GGG VN+S+CC+ P L+D LLD P + +G+ L +DL+R +GSHSI VAQLK++ L+QP S + R + LQ ++ LL+ LRGMMD GP++FFL DG SGLRLP M WP ++GYTFC W+R+E SG AR +PCL+SF G GV A +P S + YA+ LR G + G+ ++ WVFVA++H G++G A L+D++ FPRFG V ASIAC
Sbjct: 1313 RNPFVVPLIFQLLPDWPASEQENILKVFKLLLKGAGGGTVNRSLCCDVQPALMDQLLDIIPRLNGSGSECEDSLQELAIDLVRLLGSHSINVAQLKKIFRLLQPLSAVSTK------------------RMGTSPTSITSLPLQPPWMCSLLRALRGMMDDEPGPQRFFLLDGLNSGLRLPRMPHWPAQKGYTFCAWVRLEVGPESSGEKDGGARSGNRTIPVAEAPCLFSFCGEQRGQGVAACFIP----------------LRKKRRSVQRGAAVPTTASTAETPQQYALELRVGAG------------------WKKHPAIVRFPGI---VVTAGEWVFVAVAHAARRWGQRGEASVLVDSSWRTSASPFPRFGDGGVATASIAC 1645
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: D8LL16_ECTSI (Similar to neurobeachin like 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL16_ECTSI) HSP 1 Score: 154 bits (390), Expect = 3.660e-36 Identity = 100/248 (40.32%), Postives = 135/248 (54.44%), Query Frame = 1
Query: 448 RNAAVIPLLMQLLPRWEADVQRALLAALRRLLRG-GGGLVNKSVCCNTSPPLLDFLLDRFPDADAAGAS-------LMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGS-VAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVH-GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVE-GPSG--------GSGSAGAAARYSPCLYSFM-TGTGIGVEAFLVP 1131
RN V+PL+ QLLP W A Q +L + LL+G GGG VN+S+CC+ P L+D LL P + +G+ L +DL+R +GSHSI VAQLK++ L+QP S + V ++TS + LQ ++ LL+ LRGMMD GP++FFL DG SGLRLP M WP ++GYTFC W+ +E GP GSG+ +PCL+SF G GV A +P
Sbjct: 983 RNPFVVPLIFQLLPDWPASEQENILKVFQLLLKGAGGGTVNRSLCCDVQPALMDQLLHILPRLNGSGSKCEDSLQELAIDLVRLLGSHSINVAQLKKIFRLLQPLSAVSTKRVGTSSTS-------------------ITSLPLQPPWMCSLLRALRGMMDDEPGPQRFFLLDGLNSGLRLPRMPHWPAQKGYTFCAWVCLEVGPESSGERDDGAGSGNGTIPVAEAPCLFSFCGEQRGQGVAACFIP 1211
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A6G0X1N4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1N4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.780e-13 Identity = 66/201 (32.84%), Postives = 89/201 (44.28%), Query Frame = 1
Query: 430 PSSLLFRNAAVIPLLMQLLPRWEADVQRALLAALRRL-LRGGGGLVNKSVCCNTSPPLLDFLLDRFPDADAAGASL--MLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVHGPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVE 1023
PS RN +P+ L P VQR L + L L ++N+S+CC P +D LLD AG L ++DL+ E+G HSI V QLKR+ L+Q P SV + L +++G + P +FF FDG+ SGL LPP PTR G+TF TW R+E
Sbjct: 947 PSICRIRNPDAVPVFFSLFPYCTPSVQRQCLLQFKTLFLPSAFDVLNRSMCCWVQPGTMDQLLDSLE----AGIHLPEVVDLIVEIGWHSIGVRQLKRIFRLLQ--QPAMSSVVA-------------------------------PLVDALYYMIQGHNRIEQPSRFFFFDGNQSGLELPPFTL-PTR-GFTFQTWFRLE 1108
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A8J4UYA2_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UYA2_9MYCE) HSP 1 Score: 80.5 bits (197), Expect = 4.740e-12 Identity = 64/239 (26.78%), Postives = 106/239 (44.35%), Query Frame = 1
Query: 427 TPSSLLFRNAAVIPLLMQLLPRWEADVQRALLAALRRLLRGGGGLVNKSVCCNTSPPLLDFLLDR-FPDADAAGASLMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVH--GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEG---PSGGSGSAGAAARYSPCLYSFMTGTGIGVEAFL 1125
T + + +N+ + LL LL + D Q +L +++ N+SVCCN L+ LLD + D +L+L++++G HS+TV +LK++ L++ G + LL L+ + GP+ +F FDG S + LP +WP +G++FCTW+R+E P+G A Y+P L SF++ TG G+E
Sbjct: 1217 TDYNYIIQNSDAVILLFNLLKYFSTDHQHEILKKFTEIVQKY--TTNQSVCCNYH--LIYILLDSIYKDQPMDITWGILNLIQQLGYHSVTVRELKKLFGLLKSEL----------------------------------GDFRPPTTVLLLSTLQNISVSRNPGPQVYFDFDGKDSAIILPTFDKWPFPKGFSFCTWVRIESFFDPTG-------APEYNPRLLSFLSDTGCGIEVLF 1410
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: UPI0006451263 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451263) HSP 1 Score: 79.0 bits (193), Expect = 1.430e-11 Identity = 69/239 (28.87%), Postives = 109/239 (45.61%), Query Frame = 1
Query: 451 NAAVIPLLMQLLPRWEADVQRALLAALRRLLRGGGGLVNKSVCCNTSPPLLDFLLDRFPDADAAGA--------SLMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVH--GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEG---PSGGSGSAGAAARYSPCLYSFMTGTGIGVEAFLV 1128
N + L++ LL + D+QR L + +++ N+ +CCN L+ LL DA + A S +L L++ +G HS+ V +LK++ L++ +DG G +L+ LL L+ + GP+ +F FDG +S + LP ++WP +G+TFCTWLRVE P+G A Y P L S ++ TG GVEA +
Sbjct: 956 NIDALLLIIHLLHHFPLDLQRHALDTITHIVQKC--TTNQLICCNCH--LIYHLLCAI-DAISGSAQQPPMDITSKILHLVQTLGLHSVNVRELKKLFRLLK-----------------------------SDGT----GGRRLSTTSVLLSTLQNIAVSRNPGPQVYFDFDGKSSFISLPTFEKWPFTKGFTFCTWLRVESFVDPTG-------APEYKPRLISLLSDTGSGVEALFI 1149
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A151Z3T4_9MYCE (BEACH domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3T4_9MYCE) HSP 1 Score: 76.3 bits (186), Expect = 1.000e-10 Identity = 63/233 (27.04%), Postives = 107/233 (45.92%), Query Frame = 1
Query: 442 LFRNAAVIPLLMQLLPRWEADVQRALLAALRRLLRGGGGLVNKSVCCNTSPPLLDFLLDRFP-DADAAGASLMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVHGPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEG---PSGGSGSAGAAARYSPCLYSFMTGTGIGVEAFLV 1128
+ +N+ + LL LL + +Q +L L++ N+S+CCN L+ LL+ D S +L L++++G HS+TV +LK++ L++ P G TS C+ + ++ P GP+ +F FDG S ++LP +WP +G++FCTW+R+E P+G A Y P L+SF++ + G+E V
Sbjct: 1147 IIQNSDAVLLLFNLLGNFSIVLQHKILDTFITLVQKC--TTNQSMCCNCH--LIYQLLEAIHRDQPMEITSKILILIQQLGYHSVTVRELKKLFGLLKSE-PQQGDFRPQLTS----------------TCLSTLSNISVSRNP-------------GPQVYFDFDGKDSCIQLPTFDKWPFPKGFSFCTWVRIESFIDPTG-------APEYRPRLFSFLSDSECGLEVLFV 1338
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: F0ZLG9_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZLG9_DICPU) HSP 1 Score: 75.9 bits (185), Expect = 1.260e-10 Identity = 51/191 (26.70%), Postives = 90/191 (47.12%), Query Frame = 1
Query: 565 NKSVCCNTSPPLLDFLLDR-FPDADAAGASLMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVH--GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEGPSGGSGSAGAAARYSPCLYSFMTGTGIGVEAFLV 1128
N+SVCCN L+ LL+ + + + +L+L++ +G+HS+TV +LK++ L++ +G+ + +LL L+ + + GP+ +F FDG S + LP RWP +G++FCTW+R+E +G+ Y P L SF++ G G+E +
Sbjct: 94 NQSVCCNNH--LIYNLLEAIYKGQPMSITTKILELIQNLGTHSVTVRELKKLFGLLKSD----------------------------------QGEFRPPITSELLTTLQNISNSRNPGPQVYFDFDGKDSCIILPTFDRWPFPKGFSFCTWVRIESFIDPTGTP----EYRPRLLSFLSDNGSGIEVLFI 244
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: LVSC_DICDI (BEACH domain-containing protein lvsC n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=LVSC_DICDI) HSP 1 Score: 71.6 bits (174), Expect = 2.680e-9 Identity = 53/195 (27.18%), Postives = 87/195 (44.62%), Query Frame = 1
Query: 565 NKSVCCNTSPPLLDFLLDR-FPDADAAGASLMLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPK----LLQVLRGMMDVH--GPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEGPSGGSGSAGAAARYSPCLYSFMTGTGIGVEAFLV 1128
N+SVCCN L+ LL+ + + +L L+ +G HS+TV +LK++ L++ Q YLP LL L+ + + GP+ +F FDG S + LP +WP +G++FCTW+R+E +G+ Y P L+SF++ +G G+E +
Sbjct: 149 NQSVCCNCH--LIYNLLEAIYKGQPMEVTTKILKLIERLGIHSVTVRELKKLFGLLKSE--------------------------------------QGDYLPPTTSALLTTLQNISNSRNPGPQVYFDFDGKDSCIILPTFDKWPFPKGFSFCTWVRIESFVDPTGTP----EYKPRLFSFLSDSGCGIEVLFI 299
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A418AWH5_9STRA (BEACH domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AWH5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.490e-8 Identity = 60/200 (30.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 433 SSLLFRNAAVIPLLMQLLPRWEADVQRALLAALRRLLRGGG-GLVNKSVCCNTSPPLLDFLLDRFPDADAAGASL--MLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVHGPRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVE 1023
SS RN IP+L L Q L +RL ++N+S+CC P LD LLD A G L ++D++ E+G HS+ V QLKR+ L+Q S + L + L +++ + + P +FF FDG SGL L P +PT+ G+TF TWLR++
Sbjct: 1053 SSCRVRNPDAIPVLFCLFRHCTRQDQVKFLQQFKRLFDPSSYDVLNRSMCCYVQPGTLDQLLD----ALEGGVHLPEVIDVMVEIGWHSVGVHQLKRIFRLLQRPSMS---------------------------------NLVAPLVDALYYMIQRHVGLVEPSRFFFFDGDQSGLELAPFP-FPTK-GFTFHTWLRLD 1213
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Match: A0A485LMS4_9STRA (Aste57867_23059 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMS4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.500e-8 Identity = 66/223 (29.60%), Postives = 99/223 (44.39%), Query Frame = 1
Query: 448 RNAAVIPLLMQLLPRWEADVQRALLAALRRL-LRGGGGLVNKSVCCNTSPPLLDFLLDRFPDADAAGASL--MLDLLREVGSHSITVAQLKRVIWLMQPRSPTAGSVAVAATSGSAAXXXXTAAREAADGCVVAEGQLQLAYLPKLLQVLRGMMDVHG--PRQFFLFDGSASGLRLPPMQRWPTRRGYTFCTWLRVEGPSGGSGSAGAAARYSP---CLYSFM 1092
RN IP+L L P +VQ +L ++L + ++N+S+CC P +D L++ A G + ++DL+ E+G HSI V QLK + L+Q P S L + L +++G + P +FF FDG SGL L P +PT+ GYTF TWLR+E A ++P CL+SF+
Sbjct: 1015 RNPDAIPVLFCLFPHCAPNVQVDVLCQFKQLFVPSPFEVLNRSMCCYVQPSTMDQLVN----ALELGIHVPEVVDLMVEIGWHSIGVRQLKHIFRLLQ--QPAMAS-------------------------------LVAPLVDALYYMVQGQIGHQAIQPSRFFFFDGDTSGLELAPFP-FPTK-GYTFHTWLRLEDD----------ACHNPTTLCLFSFL 1188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig529.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig529.3.1 >prot_P-wetherbeei_contig529.3.1 ID=prot_P-wetherbeei_contig529.3.1|Name=mRNA_P-wetherbeei_contig529.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=519bp SNAGQAVHASLALLTALTAGNAASKAALAATLAVPAGRSGGVQYGRLGDLback to top mRNA from alignment at P-wetherbeei_contig529:7376..8934- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig529.3.1 ID=mRNA_P-wetherbeei_contig529.3.1|Name=mRNA_P-wetherbeei_contig529.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1559bp|location=Sequence derived from alignment at P-wetherbeei_contig529:7376..8934- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig529:7376..8934- >mRNA_P-wetherbeei_contig529.3.1 ID=mRNA_P-wetherbeei_contig529.3.1|Name=mRNA_P-wetherbeei_contig529.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1557bp|location=Sequence derived from alignment at P-wetherbeei_contig529:7376..8934- (Phaeothamnion wetherbeei SAG_119_79)back to top |