prot_P-wetherbeei_contig5284.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig5284.3.1
Unique Name	prot_P-wetherbeei_contig5284.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	226

Homology

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BLAST of mRNA_P-wetherbeei_contig5284.3.1 vs. uniprot
Match: D8LME2_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME2_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 6.450e-38
Identity = 79/176 (44.89%), Postives = 103/176 (58.52%), Query Frame = 0

Query:   11 PWDHAGPHSAAAYAWDAPLEKSRVLRVEFQQGGKWEAREYPLDEFANHRHVRLTRRLPDLSRPTRRGYALQKKVGALTDTWRRRYCVLKGQVLYIFRDAKNLELKGVVYLGATDAAAGXXXXXXXXXXXXXTVAAVYQLRLQDAAPTGDLFGRVGAMMDDAVSFLLGDELVHAPGG 186
            PWD  GP +A+ + WD P+ +SRVL V F+Q GKWE REY LDE   H+ V LTR LP L  P  RG  LQ++ G LTD WRRR+ VLKG VL++F+D   + L+G +YLGAT + +                A + Q         GD+  ++G MMDDAV  L+G E V + GG
Sbjct:  785 PWDGLGPQAASPFTWDQPVGESRVLTVGFEQAGKWEEREYRLDELEKHKRVSLTRTLPSLENPRLRGEMLQRQTGTLTDVWRRRWAVLKGPVLFLFKDKGCVHLRGAIYLGATRSTSDQGGGGARGGAAGPQRAQIGQKA--GGRDKGDILDKMGNMMDDAVGLLVGPEFVSSGGG 958

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BLAST of mRNA_P-wetherbeei_contig5284.3.1 vs. uniprot
Match: A0A6H5K0E6_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 9.280e-38
Identity = 80/176 (45.45%), Postives = 101/176 (57.39%), Query Frame = 0

Query:   11 PWDHAGPHSAAAYAWDAPLEKSRVLRVEFQQGGKWEAREYPLDEFANHRHVRLTRRLPDLSRPTRRGYALQKKVGALTDTWRRRYCVLKGQVLYIFRDAKNLELKGVVYLGATDAAAGXXXXXXXXXXXXXTVAAVYQLRLQDAAPTGDLFGRVGAMMDDAVSFLLGDELVHAPGG 186
            PWD  GP +AA + WD P+ +SRVL V F Q GKWE REY LDE   H+ V LTR LP L  P  RG  LQ++ G LTD WRRR+ VLKG VL++F+D   + L+G +YLGAT +                  A + Q         GD+  ++G MMDDAV  L+G E V + GG
Sbjct: 1113 PWDGLGPQAAAPFTWDQPVGESRVLTVGFAQAGKWEEREYRLDELEKHKRVSLTRTLPSLENPRLRGEMLQRQTGTLTDVWRRRWAVLKGPVLFLFKDKGCVHLRGAIYLGATRSTGDQGGGGARGGAAGPQRAQIGQKA--GGRDKGDILDKMGNMMDDAVGLLVGPEFVSSGGG 1286

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BLAST of mRNA_P-wetherbeei_contig5284.3.1 vs. uniprot
Match: A0A835ZA73_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA73_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.570e-27
Identity = 82/197 (41.62%), Postives = 97/197 (49.24%), Query Frame = 0

Query:   10 PPWDHAGPHSAAAYAWDAPLE----KSRVLRVEFQQGGKWEAREYPLDEFANHRHVRLTRRLPDLSRPTRRGYALQKKVGALTD----------------TWRRRYCVLKGQVLYIFRDAKNLELKGVVYLGATDAAAGXXXXXXXXXXXXXTVAAVYQLRLQDAAPTGDLFGRVGAMMDDAVSFLLGDELVHAPGG 186
            PPWD     ++  YAWD P        R L+V F+QG  W  REY LDEFA HR VRL R LP L  P R    LQK  GALT                 TW+RR+ VLKG VLY+F DA  L+LKG+++L     A            XXX   A            GDL  RVG +MDDAV  ++GDE + A  G
Sbjct: 1038 PPWDPLPAQTSLPYAWDHPEAGGGAAGRSLKVAFRQGNAWVEREYRLDEFAEHRAVRLRRSLPSLDTPRRAAPLLQKTRGALTXXXXXXXXXXXXXXXXXTWKRRWAVLKGPVLYLFGDAHALQLKGIIHLRLPGGAGVRVRPSRGRRGXXXXXXA------------GDLLTRVGEVMDDAVGLIVGDEFIPAKRG 1222

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig5284.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig5284.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LME2_ECTSI	6.450e-38	44.89	SHR-BD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K0E6_9PHAE	9.280e-38	45.45	PH domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
A0A835ZA73_9STRA	4.570e-27	41.62	PH domain-containing protein n=1 Tax=Tribonema min...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 71..130 e-value: 5.1E-8 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..226
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 68..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig5284	contig	P-wetherbeei_contig5284:2259..3433 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig5284.3.1	mRNA_P-wetherbeei_contig5284.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig5284 2259..3456 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig5284.3.1 ID=prot_P-wetherbeei_contig5284.3.1|Name=mRNA_P-wetherbeei_contig5284.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
MAAGAAGWAPPWDHAGPHSAAAYAWDAPLEKSRVLRVEFQQGGKWEAREY
PLDEFANHRHVRLTRRLPDLSRPTRRGYALQKKVGALTDTWRRRYCVLKG
QVLYIFRDAKNLELKGVVYLGATDAAAGAGGGGRGGRGARGTVAAVYQLR
LQDAAPTGDLFGRVGAMMDDAVSFLLGDELVHAPGGGGGGAGSSDDGTAL
ARPGEHDGGAGGRGGRGHAGTHGRGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf