mRNA_P-wetherbeei_contig10189.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10189.2.1
Unique NamemRNA_P-wetherbeei_contig10189.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: A0A6H5JW34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW34_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.320e-75
Identity = 170/401 (42.39%), Postives = 209/401 (52.12%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVAGSPERVGLCRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVPVRGAPAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELRATATTATAGEPSELEMSAPGTKKATESATADTPAAALMATTASATAANEVPPLGAAAAVLHGACVSRTPFARSLLTWSGASLMA 1389
            SA++RCG+AGE  P H+VPS + G  +  G  RT +  +  LT     ++   L CRPRERRV++CE +V P  LREA+A VL RYLQV SL +  G  PAL+CTG  +G+VLD+G +EA  VAVY G  L  +YA  PLG RAV+ R+ +LL E        QA   + G A                                   LT  +LEDV  RAC+VPV G P+   VS M+ +  G RRV V GA R  AA  ALF GD+EG +LATL+LDCL RCPRD R A V NVLV GGGA+LPGL ARL +E+ A AT A A      E    G   A  +   D                              G CV R P  R  L W+GAS+MA
Sbjct:   25 SAFIRCGFAGEPRPIHVVPSPIGGGGDGEGSARTEQECVEVLTGVLQRLYTESLQCRPRERRVVVCESMVSPRPLREAVAYVLFRYLQVPSLHMCAGPAPALFCTGADTGMVLDIGRSEAHVVAVYRGATLTSSYAGVPLGCRAVQERVRELLVE-----EKEQAAGGDGGGARP---------------------------------LTSRELEDVTVRACLVPVGGVPSPDQVSPMELMFAGHRRVVVSGATRTTAAEQALFEGDEEGRSLATLVLDCLKRCPRDCRRALVQNVLVAGGGALLPGLPARLAQEIEALATAAAAQPLGSSE----GYSWARAAVCGDP----------------------------GGLCVVRVPVRRDNLVWTGASIMA 355          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: D8LG62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG62_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 1.310e-59
Identity = 157/411 (38.20%), Postives = 191/411 (46.47%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVAGSPERVGLCRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVPVRGAPAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELRATATTATAGEPSELEMSAPGTKKATESATADTPAAALMATTASATAANEVPPLG-------AAAAVLH---GACVSRTPFARSLLTWSGASLMA 1389
            SA++RCG+AGE  P H+VPS + G  +     RT + W+  LT     ++   L CRPR                             V SL +  G  PAL+CTGV +G+VLD+G +EA  VAVY G  L  +YA  PLG RAV+ R+ +LL E        QA  D  GA                                    LT  ++EDVV RAC+VPV G P+   VS M+ +  G RRV V GA R  AA  ALF GD+EG +LATL+LDCL RCPRD R A V NVLV GGGA+LPGL ARL +E+ A AT A A  P                                        PLG       A AAV     G CV R P  R  L W+GAS+MA
Sbjct:   25 SAFIRCGFAGEPRPIHVVPSPIGGDGDGEDSARTEQEWVEVLTGVLQRLYTESLQCRPR-----------------------------VPSLHMCAGPAPALFCTGVDTGMVLDIGRSEAHVVAVYRGATLTSSYAGVPLGCRAVQERVRELLIE-----EEEQAVGDGGGARP----------------------------------LTSREVEDVVVRACLVPVGGVPSPDQVSPMELMFAGQRRVVVSGATRTTAAEQALFEGDEEGRSLATLVLDCLKRCPRDCRRALVQNVLVAGGGAVLPGLPARLAQEIEALATAAAAPPP----------------------------------------PLGSSEGYSWARAAVCGDPGGLCVVRVPVRRDHLVWTGASIMA 327          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: A0A835Z6C3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.720e-45
Identity = 144/425 (33.88%), Postives = 186/425 (43.76%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVAGSPERVGLCRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVPVRGAPAAADVSTMDFLLRGGRRVTVPGAVRAA-----AAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAM-LPGLCARLGEELRATATT-------------ATAGEPSELEMSAPGTKKATESATADTPAAALMATTASATAANEVPPLGAAAAV----LHGACVSRTPFARSLLTWSGASLMAA 1392
            +A+VRCG+AGE  PR I+ S +A  P  +    ++++WL  L+ F   M+ + L+C+P+ER V++CE +  P A+R+A+   L  +LQV S+ +V G  PALYC G   G+VLD+G  EA  +AVY GVPLLHTY AAPLG  AV  RL  LLG                                                    P L   D E++VARAC                                         AADALFG + E  ++A L+  C  RCP DAR      +LV GGGA  L GLCARL  ELRA                   A  P+              S+ A +P  A             VP L  AAA     L GACV  TP  R+ L W+GAS++AA
Sbjct:   10 NAWVRCGFAGECRPRRILRSPLAEHPATM----SQQSWLEILSPFLSSMYSKELLCKPKERGVVICESMTMPRAIRQAVTEALFTHLQVPSVLMVAGPAPALYCIGHPDGIVLDIGLKEARVIAVYRGVPLLHTYQAAPLGLEAVHDRLRALLG---------------------------------------------------LPDLPPADAENIVARACFAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADALFGANPERLSVAALVAACARRCPVDARRHLAARLLVAGGGAAALSGLCARLQRELRAAXXXXXXXXXTXXXXXXVAAPAPAPXXXXXXXXPAVGPSSAAGSPQGA------------HVPLLSDAAAAPPAELQGACVVSTPLPRACLLWAGASILAA 367          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: A0A8J2W980_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2W980_9CRUS)

HSP 1 Score: 143 bits (361), Expect = 8.970e-35
Identity = 108/335 (32.24%), Postives = 163/335 (48.66%), Query Frame = 1
Query:  190 AYVRCGYAGESHPRHIVPSVVAGSPERVGL-----CRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVPV--------------RGAPAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELR 1137
            AY +CG+ GE+ PR I+PS V GS +  G+        +E  L  L +F   +F + L+   RERR+++ E ++CP   RE +A VL  + +V S+  VP     LY  G+ +  V+DVGH E + + V +G PL+H + A PLGA+A++ RL  LL            R   QG+                            +   V P L+   LED+V R C V                 G        T+ + L G   +T+ G+VR  +A + LF  D+E  +LA+++LD +   P D R     N++V+GGG+M+PGL ARL EE++
Sbjct:   18 AYTKCGFVGENEPRVIIPSKVDGSKKGEGVYLHEYSNEKELHL-NLVKFLHHIFFKYLLVNHRERRIVIVESLLCPTEFREILAKVLFVHFEVPSVLFVPSHLVTLYTLGINTAFVIDVGHEETTMIPVCEGTPLIHAWQAQPLGAKAIQGRLESLL----------LLRAKVQGS-----------------------DGQKVDLVDVMPKLSRGILEDIVVRTCFVTTLPRSRQLVASRTNEAGPSPPVPPPTILYPLSGNNNLTLDGSVREESA-EVLFETDNEMVSLASMILDSILASPIDFRIPLAENLVVIGGGSMMPGLKARLMEEVK 317          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: A0A6P8HGG6_ACTTE (actin-related protein 10-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HGG6_ACTTE)

HSP 1 Score: 142 bits (357), Expect = 1.070e-33
Identity = 109/334 (32.63%), Postives = 166/334 (49.70%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVAGSPERVGLCRTR------------EAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIV-PVRGAPA-----AADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEEL 1134
            SAY +CG+A ES PRHI+PS +  +    G  RT             E + + L +F   ++ R L+  PR+RRV++CE ++CP   RE +A VL ++ +VQS+   P    +L+  GV +G+V+D G+ E+  + VY+G+P+L      PL A+A+   L + L +     S  Q    E+G                               ++V  +L DE LED+  R C V P    P      A+ V  +D+ L GGR + + G +R     D LF GD+E  ++AT LLD L +CP D R     N++++GG  M PG   RL +E+
Sbjct:   22 SAYTKCGFAKESAPRHIIPSTITHTVN--GTTRTEHVISDDEKRNPDELYAI-LRDFIHMIYFRYLLVNPRDRRVVICESVLCPTLFRETLAQVLFKHFEVQSVLFAPCHLLSLFTLGVPTGLVVDCGYNESLILPVYEGIPILKAVVGIPLAAKAIHKYLEQQLMD----RSLVQI---EKGIKPL---------------------------SSVIGALPDEILEDIKVRTCFVAPKFSGPKDEPRPASMVPQVDYPLDGGRILRIEGQIREQTF-DILFDGDEEEKSIATALLDSLLQCPIDTRKQLAENIVLIGGTVMTPGFKHRLMQEI 317          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: E9H6E7_DAPPU (Uncharacterized protein n=8 Tax=Daphnia TaxID=6668 RepID=E9H6E7_DAPPU)

HSP 1 Score: 137 bits (345), Expect = 1.580e-32
Identity = 101/334 (30.24%), Postives = 160/334 (47.90%), Query Frame = 1
Query:  190 AYVRCGYAGESHPRHIVPSVVAGSPERVGLC----RTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVPV--------------RGAPAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELR 1137
            AY +CG+ GE+ PR I+PS + GS +  G+        +     L +F   +F + L+   RERR+++ E ++CP   RE +A VL  + +V S+  VP     LY  G+ +  V+D+GH E + + V +G PL+H + A PLGA+A++ RL  LL            R   QG+                            +   V P L+   LED+V R C V                 G        T+ + L G   +T+ G+VR  +A + LF  D+E  +LA+++LD +   P D R     N++++GGG+M+PGL +RL  E++
Sbjct:   18 AYTKCGFVGENEPRVIIPSKLDGSKKGEGVYLHEYSNEKELHFNLVKFLHHIFFKYLLVNHRERRIVIVESLLCPTEFREILANVLFVHFEVPSVLFVPSHLVTLYTLGINTAFVIDIGHEETTMIPVCEGTPLIHAWQAQPLGAKAIQGRLESLL----------LLRAKVQGS-----------------------DGQKVDLVDVIPKLSRGILEDIVVRTCFVTTLPRSRQLVASRTNEAGPSPPVPPPTILYPLSGNNNLTLDGSVREESA-EVLFETDNEMVSLASMILDSILASPIDFRIPLAENLVIIGGGSMMPGLKSRLVSEVK 317          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: F1R008_DANRE (Actin-related protein 10 n=28 Tax=Cyprinoidei TaxID=30727 RepID=F1R008_DANRE)

HSP 1 Score: 137 bits (344), Expect = 3.150e-32
Identity = 104/336 (30.95%), Postives = 166/336 (49.40%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVA--GSPERVGLCR----TREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVP--VRG-----------APAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELR 1137
            +AY +CG+AGE+ PR I+PS +   GS E V + +    T E + + L EF   ++ R L+  PR+RRV++ E I+CP+  R+ ++ VL R+ +V S+   P    ++   G+ S +V+D G+ E   + +Y+G+P+L  + A P+G +A+   L  LL E        Q   D   +                            +  +V   + ++ +ED+  R C V    RG           A   A    +D+ L G + + V G +R + A + LF  D+E  ++ATLLLD L +CP D R     N+L++GG AMLPG   RL  E+R
Sbjct:   22 AAYTKCGFAGETGPRFIIPSEIKNPGSQEVVAVVQFNINTEELYTI-LKEFIHLLYFRHLLVNPRDRRVVVIESILCPSHYRDTLSRVLFRHFEVPSVLFAPSHLMSIMTLGLQSALVMDCGYTETLVLPIYEGIPILSAWEALPMGGKAIHKELQSLLSE--------QCTVDTDSST-------------------------GLQLPSVISHIPEDVVEDIKVRTCFVSDLQRGLKIQEAKFNTDAERPAPPPDVDYPLDGQKILHVKGFIRDSVA-EMLFEQDNEEKSIATLLLDTLVKCPIDTRKVLSENLLIIGGTAMLPGFLHRLLAEIR 322          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: UPI001CF519F7 (actin-related protein 10-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF519F7)

HSP 1 Score: 137 bits (346), Expect = 3.660e-32
Identity = 107/352 (30.40%), Postives = 168/352 (47.73%), Query Frame = 1
Query:  124 LIGLSLVSHAALLCTPSTLFCSAYVRCGYAGESHPRHIVPSVVA----GSPERVGLC-----RTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIV-PVRGAPA-----AADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEEL 1134
            +IGL    HA ++   +     AY +CG+A E+ PRHI+ S+++    G  E V +      R  +     + +F   ++ R L+  PR+RRV++CE ++C    R A+A VL ++ +V S+   P    AL+  G+ SG+++D G++E   + VY+G  +L      PLGA+A+   L + L           AR   Q                                ++V  SL DE LED+  R C V P    P      A+ V  +D+ L GGR + + G +R     D LF GDDE  ++AT +LD + +CP D R     N++++GG  M PG   RL +E+
Sbjct:    6 VIGLGGEKHAVIIDIGT-----AYTKCGFASETSPRHIIRSIISHTINGQTETVNVISNEHDRHPDELYAIIRDFLHQIYFRYLLVNPRDRRVVICESLLCSTVWRNAVAKVLFKHFEVPSVLFAPHHLLALFTLGIPSGLIMDCGYSETMVLPVYEGTAILKAIEMIPLGAKAIHKHLEEQL----------MARSLVQ------------------------IETGVKPLSSVVDSLKDETLEDIKVRTCFVAPKFSGPEGEQRPASLVPKVDYPLDGGRILRIEGHIREQTF-DMLFDGDDEEKSIATCILDSILKCPIDTRKQLAENIVLIGGTVMTPGFKHRLMQEI 317          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: W7TJ90_9STRA (Actin-related protein 10 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJ90_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.000e-32
Identity = 109/325 (33.54%), Postives = 148/325 (45.54%), Query Frame = 1
Query:  187 SAYVRCGYAGESHPRHIVPSVVAG-SPERVGLCRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIV------PVRGAPAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGD-DEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELR 1137
            SA ++CG+AGES PRH++PS +   S +        E W   L    V +    L  RP E +VL+CEP+      REA+A VL ++L+V ++ + P     LY  G  +G+V+DVG  E+  +AV  G PLLHTYA   +GA  +  R  +LL  AA           ++G                                     L  E L+D+V RAC V       V   P A +       L    R TV         A+ LF    D+G +L   +L+CL RCPRD R     +VLV GG AMLPG C RL EE++
Sbjct:   12 SAIIKCGFAGESSPRHLLPSPLDDWSRQAASRGWGSEEWTQSLGPLLVRLLVHCLHVRPSENKVLICEPLAGSTTFREALAYVLFQWLRVPAIVMAPSLEMPLYTAGAETGLVVDVGFRESHVLAVVFGRPLLHTYAVVGMGALTLLDRARELLESAATAKKEGGCLSGQRG-----------------------------------DRLPLELLQDIVMRACFVVGKEDFQVDAEPIAYEEKGFKLTLTPELRTTV---------AEGLFAESVDDGESLPIAVLECLRRCPRDVRRLLASHVLVSGGVAMLPGFCPRLAEEVQ 292          
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Match: A0A672MK07_SINGR (Actin-related protein 10-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MK07_SINGR)

HSP 1 Score: 134 bits (337), Expect = 9.270e-32
Identity = 109/347 (31.41%), Postives = 167/347 (48.13%), Query Frame = 1
Query:  154 ALLCTPSTLFCSAYVRCGYAGESHPRHIVPSVV--AGSPERVGL--CRTREAWLVPLTEFFVCMFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGAFPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRARLVKLLGEAAGGSSNAQARWDEQGAATXXXXXXXXXXXXXXXXXXXXXXXXXXETAAVAPSLTDEDLEDVVARACIVP--VRG-------------APAAADVSTMDFLLRGGRRVTVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLVVGGGAMLPGLCARLGEELR 1137
            AL+C    + C    RCG+AGE+ PR I+PS V  AGSPE V      T E + + L EF   ++ R L+  PR+RRV++ E ++CP+  RE ++ V  ++ +V S+   PG   ++   G+ S +V+D G+ E     +Y+GVP+L  + A P+G +A+   L  LL E        Q   D                                    V  S+ ++ +ED+  R C V    RG             A   A    +++ L G + + + G++R + A + LF  D+E  ++ATLLLD L +CP D R     NV+++GG AMLPG   RL  E+R
Sbjct:    4 ALVCCVVCVMC----RCGFAGETGPRFIIPSEVKRAGSPEVVVQYNINTEELYSI-LKEFVHLLYFRHLLVNPRDRRVVIVESVLCPSHFRETLSRVFFKHFEVPSVLFAPGHLMSVMTLGIQSALVMDCGYTE---TLIYEGVPILSAWEALPMGGKAIHRELHSLLSE--------QCTLDTDSGT-------------------------GLSLPTVISSVPEDVVEDIKVRVCFVSDLQRGMKIQEAKFNMDGSAERPAPPPDVEYPLDGRKILHIKGSIRDSVA-EMLFEQDNEEKSIATLLLDTLVKCPIDTRKVLSENVVIIGGTAMLPGFLHRLLSEIR 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10189.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW34_9PHAE2.320e-7542.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG62_ECTSI1.310e-5938.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z6C3_9STRA6.720e-4533.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2W980_9CRUS8.970e-3532.24Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A6P8HGG6_ACTTE1.070e-3332.63actin-related protein 10-like n=1 Tax=Actinia tene... [more]
E9H6E7_DAPPU1.580e-3230.24Uncharacterized protein n=8 Tax=Daphnia TaxID=6668... [more]
F1R008_DANRE3.150e-3230.95Actin-related protein 10 n=28 Tax=Cyprinoidei TaxI... [more]
UPI001CF519F73.660e-3230.40actin-related protein 10-like n=2 Tax=Acropora Tax... [more]
W7TJ90_9STRA6.000e-3233.54Actin-related protein 10 n=2 Tax=Monodopsidaceae T... [more]
A0A672MK07_SINGR9.270e-3231.41Actin-related protein 10-like n=1 Tax=Sinocycloche... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10189contigP-wetherbeei_contig10189:151..1542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LG62
Preferred nameACTR10
PFAMsActin
Model size1393
Max annot lvl2759|Eukaryota
KEGG koko:K16576
Hectar predicted targeting categorymitochondrion
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003674,GO:0005198,GO:0005200,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005884,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0012505,GO:0015629,GO:0015630,GO:0016043,GO:0016192,GO:0019882,GO:0019884,GO:0019886,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0032991,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060205,GO:0070013,GO:0071840,GO:0097708,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:1904813
Exons1
Evalue1.43e-48
EggNOG OGsCOG5277@1|root,KOG0676@2759|Eukaryota
Ec32 ortholog descriptionActin-related protein 10
Ec32 orthologEc-11_001820.1
DescriptionATP binding
Cds size1062
COG categoryZ
BRITEko00000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.9923894-CDS-P-wetherbeei_contig10189:150..12121683185857.9923894-CDS-P-wetherbeei_contig10189:150..1212Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10189 151..1212 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185858.003549-UTR-P-wetherbeei_contig10189:1212..15421683185858.003549-UTR-P-wetherbeei_contig10189:1212..1542Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10189 1213..1542 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10189.2.1prot_P-wetherbeei_contig10189.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10189 151..1212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10189.2.1

>prot_P-wetherbeei_contig10189.2.1 ID=prot_P-wetherbeei_contig10189.2.1|Name=mRNA_P-wetherbeei_contig10189.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=354bp
MFRRLLICRPRERRVLLCEPIVCPAALREAMAVVLLRYLQVQSLCLVPGA
FPALYCTGVMSGVVLDVGHAEASAVAVYDGVPLLHTYAAAPLGARAVRAR
LVKLLGEAAGGSSNAQARWDEQGAATAAATTAAAGAPLPTESAAAAAAAV
AAETAAVAPSLTDEDLEDVVARACIVPVRGAPAAADVSTMDFLLRGGRRV
TVPGAVRAAAAADALFGGDDEGCTLATLLLDCLDRCPRDARAATVGNVLV
VGGGAMLPGLCARLGEELRATATTATAGEPSELEMSAPGTKKATESATAD
TPAAALMATTASATAANEVPPLGAAAAVLHGACVSRTPFARSLLTWSGAS
LMAA
back to top

mRNA from alignment at P-wetherbeei_contig10189:151..1542-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10189.2.1 ID=mRNA_P-wetherbeei_contig10189.2.1|Name=mRNA_P-wetherbeei_contig10189.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1392bp|location=Sequence derived from alignment at P-wetherbeei_contig10189:151..1542- (Phaeothamnion wetherbeei SAG_119_79)
CTATGCTCGGCTCCTCTGGTGCCGGTATTACCTTTGGCGGTGTCGGGATC GGCATTGAAAAGCCTGCCGTGGTGATTGACTTCGGGAGGTGAGACAAATG ATACTTTGCTTTCGTCCTCAGCACTCATCGGCCTCTCTTTAGTGTCGCAT GCCGCCCTTCTTTGCACCCCTTCCACGCTTTTCTGCAGCGCGTACGTGAG ATGCGGCTACGCCGGCGAGAGTCATCCGCGCCACATCGTCCCTTCTGTCG TCGCTGGCTCGCCGGAGCGGGTAGGGTTGTGCCGCACGCGAGAAGCGTGG CTGGTGCCGCTTACGGAATTCTTCGTTTGCATGTTCAGAAGACTGCTCAT CTGCCGGCCGCGAGAGCGCCGCGTGCTTCTCTGCGAGCCCATCGTCTGCC CTGCCGCCCTCCGCGAAGCCATGGCGGTCGTGCTGTTGCGGTACCTGCAG GTGCAGTCGCTTTGCCTCGTACCCGGCGCGTTTCCCGCCCTTTATTGCAC CGGCGTCATGTCCGGTGTCGTGTTGGACGTGGGACACGCGGAGGCGTCAG CGGTCGCAGTCTACGACGGCGTTCCGCTGCTGCACACGTACGCGGCGGCG CCTCTCGGCGCTCGCGCAGTGCGTGCGCGCCTGGTCAAATTGCTGGGAGA AGCTGCAGGCGGCAGCAGCAACGCTCAGGCAAGATGGGATGAACAGGGAG CAGCGACGGCGGCGGCAACCACAGCGGCAGCAGGAGCACCATTGCCGACA GAAAGCGCAGCCGCGGCAGCAGCTGCAGTGGCTGCGGAAACAGCTGCCGT GGCGCCGTCCTTGACAGATGAGGACTTGGAAGACGTCGTGGCCCGTGCCT GCATTGTGCCCGTACGAGGTGCCCCCGCCGCTGCAGACGTCAGCACCATG GATTTCCTGCTGCGGGGCGGTCGCCGCGTCACCGTCCCGGGAGCCGTGCG CGCCGCCGCGGCCGCCGACGCGCTGTTCGGCGGCGACGACGAAGGTTGCA CGCTGGCGACCCTGCTCCTCGACTGCCTGGACCGCTGCCCGCGGGACGCG CGCGCCGCGACGGTGGGCAACGTGTTGGTGGTCGGCGGCGGCGCCATGCT GCCAGGGCTGTGCGCCCGCCTGGGCGAAGAACTGCGGGCAACGGCAACAA CGGCTACGGCCGGAGAACCATCAGAGCTTGAAATGTCGGCGCCGGGGACC AAAAAAGCAACGGAGTCGGCAACAGCAGATACACCCGCAGCAGCTCTAAT GGCAACAACAGCGTCAGCAACGGCAGCAAACGAAGTGCCGCCGCTGGGGG CAGCAGCAGCGGTGCTTCATGGCGCCTGTGTCTCCCGCACGCCATTCGCC CGCAGCCTGCTGACGTGGTCGGGCGCGTCGCTGATGGCGGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10189:151..1542-

>mRNA_P-wetherbeei_contig10189.2.1 ID=mRNA_P-wetherbeei_contig10189.2.1|Name=mRNA_P-wetherbeei_contig10189.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1062bp|location=Sequence derived from alignment at P-wetherbeei_contig10189:151..1542- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCAGAAGACTGCTCATCTGCCGGCCGCGAGAGCGCCGCGTGCTTCT
CTGCGAGCCCATCGTCTGCCCTGCCGCCCTCCGCGAAGCCATGGCGGTCG
TGCTGTTGCGGTACCTGCAGGTGCAGTCGCTTTGCCTCGTACCCGGCGCG
TTTCCCGCCCTTTATTGCACCGGCGTCATGTCCGGTGTCGTGTTGGACGT
GGGACACGCGGAGGCGTCAGCGGTCGCAGTCTACGACGGCGTTCCGCTGC
TGCACACGTACGCGGCGGCGCCTCTCGGCGCTCGCGCAGTGCGTGCGCGC
CTGGTCAAATTGCTGGGAGAAGCTGCAGGCGGCAGCAGCAACGCTCAGGC
AAGATGGGATGAACAGGGAGCAGCGACGGCGGCGGCAACCACAGCGGCAG
CAGGAGCACCATTGCCGACAGAAAGCGCAGCCGCGGCAGCAGCTGCAGTG
GCTGCGGAAACAGCTGCCGTGGCGCCGTCCTTGACAGATGAGGACTTGGA
AGACGTCGTGGCCCGTGCCTGCATTGTGCCCGTACGAGGTGCCCCCGCCG
CTGCAGACGTCAGCACCATGGATTTCCTGCTGCGGGGCGGTCGCCGCGTC
ACCGTCCCGGGAGCCGTGCGCGCCGCCGCGGCCGCCGACGCGCTGTTCGG
CGGCGACGACGAAGGTTGCACGCTGGCGACCCTGCTCCTCGACTGCCTGG
ACCGCTGCCCGCGGGACGCGCGCGCCGCGACGGTGGGCAACGTGTTGGTG
GTCGGCGGCGGCGCCATGCTGCCAGGGCTGTGCGCCCGCCTGGGCGAAGA
ACTGCGGGCAACGGCAACAACGGCTACGGCCGGAGAACCATCAGAGCTTG
AAATGTCGGCGCCGGGGACCAAAAAAGCAACGGAGTCGGCAACAGCAGAT
ACACCCGCAGCAGCTCTAATGGCAACAACAGCGTCAGCAACGGCAGCAAA
CGAAGTGCCGCCGCTGGGGGCAGCAGCAGCGGTGCTTCATGGCGCCTGTG
TCTCCCGCACGCCATTCGCCCGCAGCCTGCTGACGTGGTCGGGCGCGTCG
CTGATGGCGGCC
back to top