prot_P-wetherbeei_contig52796.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52796.1.1
Unique Nameprot_P-wetherbeei_contig52796.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length126
Homology
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2A9D6_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2A9D6_ARAVE)

HSP 1 Score: 104 bits (259), Expect = 5.740e-26
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI   V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ +R+S
Sbjct:    1 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHTVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNRGLTFRPT-------KKPLVGYADADWASDITDRKS 118          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y1ZNJ8_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y1ZNJ8_ARAVE)

HSP 1 Score: 106 bits (265), Expect = 2.980e-25
Identity = 59/126 (46.83%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI  +V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ NR+S
Sbjct:   72 MQDAKTVKTPLDPNVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHSVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNRGLTFRPT-------KKPLVGYADADWASDITNRKS 189          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2ERS1_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2ERS1_ARAVE)

HSP 1 Score: 101 bits (252), Expect = 4.600e-25
Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNR 124
            M DA  V TP+ P  +     M P T AE  EM+  P+R LIG+++YLA+ TRPDI   VR LS+F  NPG PHW AA  +L+YLKGT  +GL +              +GFADADWA D+ +R
Sbjct:    1 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKDEMSLYPYRSLIGSLMYLAIYTRPDICHTVRHLSQFNENPGMPHWTAAERVLKYLKGTKNRGLTFRPT-------KRPLVGFADADWASDIIDR 116          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2CIE4_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2CIE4_ARAVE)

HSP 1 Score: 102 bits (253), Expect = 1.310e-24
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM   P+R LIG+++YLA+ TRPDI   VR LS+F  NPG PHW AA  +L+YLK T  +GL +              +GFADADWA D+ +R+S
Sbjct:    1 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMPLYPYRSLIGSLMYLAIYTRPDICHTVRHLSQFNENPGMPHWTAAERVLKYLKCTKNRGLTFRPT-------KRPLVGFADADWASDIIDRKS 118          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2S606_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2S606_ARAVE)

HSP 1 Score: 106 bits (264), Expect = 3.070e-24
Identity = 60/126 (47.62%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI  AV  LS+F  NPG PHW A+  +L+YLKGT  +GL +              IGFADADWA D+ +R+S
Sbjct:  397 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHAVSYLSQFNENPGMPHWTASKRVLKYLKGTKNRGLTFRPT-------KRPLIGFADADWASDITDRKS 514          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2MZF4_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2MZF4_ARAVE)

HSP 1 Score: 103 bits (257), Expect = 7.970e-24
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI   V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ +R+S
Sbjct:  246 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHTVSYLSQFNENPGMPHWTAAKRVLKYLKGTKYRGLTFRPT-------KKPLVGYADADWASDITDRKS 363          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2KNH3_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2KNH3_ARAVE)

HSP 1 Score: 101 bits (251), Expect = 9.580e-24
Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG++++LA+ TRPDI   V  LS+F  NPG PHW AA  +L+YLKGT   GL +              +G+ADADWA D+ +R+S
Sbjct:    1 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMHLAICTRPDICHTVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNGGLTFRST-------KKPLVGYADADWASDITDRKS 118          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2SE01_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2SE01_ARAVE)

HSP 1 Score: 104 bits (259), Expect = 1.190e-23
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI   V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ +R+S
Sbjct:  245 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHTVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNRGLTFRPT-------KKPLVGYADADWASDITDRKS 362          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2KRD5_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2KRD5_ARAVE)

HSP 1 Score: 104 bits (260), Expect = 1.320e-23
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI  +V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ +R+S
Sbjct: 1069 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHSVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNRGLTFRPT-------KRPLVGYADADWASDITDRKS 1186          
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Match: A0A4Y2C1S9_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2C1S9_ARAVE)

HSP 1 Score: 104 bits (259), Expect = 1.770e-23
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    1 MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAVTTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAAIGAAVSGAAIGFADADWARDVDNRRS 126
            M DA  V TP+ P  +     M P T AE AEM+  P+R LIG+++YLA+ TRPDI   V  LS+F  NPG PHW AA  +L+YLKGT  +GL +              +G+ADADWA D+ +R+S
Sbjct:  800 MQDAKTVKTPLDPSVKLTKE-MCPKTEAEKAEMSLYPYRSLIGSLMYLAICTRPDICHTVSYLSQFNENPGMPHWTAAKRVLKYLKGTKNRGLTFRPT-------KKPLVGYADADWASDITDRKS 917          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52796.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y2A9D6_ARAVE5.740e-2646.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1ZNJ8_ARAVE2.980e-2546.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2ERS1_ARAVE4.600e-2546.77Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2CIE4_ARAVE1.310e-2446.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2S606_ARAVE3.070e-2447.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2MZF4_ARAVE7.970e-2446.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2KNH3_ARAVE9.580e-2445.24Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2SE01_ARAVE1.190e-2346.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2KRD5_ARAVE1.320e-2346.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2C1S9_ARAVE1.770e-2346.03Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..126
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 28..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52796contigP-wetherbeei_contig52796:125..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52796.1.1mRNA_P-wetherbeei_contig52796.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52796 98..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52796.1.1 ID=prot_P-wetherbeei_contig52796.1.1|Name=mRNA_P-wetherbeei_contig52796.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
MSDAWPVLTPVCPGAEAPNAAMAPSTSAEAAEMARKPFRELIGTVLYLAV
TTRPDIFDAVRALSRFRNNPGHPHWLAALWLLRYLKGTLKKGLLYSQNAA
IGAAVSGAAIGFADADWARDVDNRRS
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