mRNA_P-wetherbeei_contig5277.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: D7FV82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV82_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.280e-35 Identity = 102/216 (47.22%), Postives = 128/216 (59.26%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLV---YRLWTPMYYFVTREKSRKATFSAMRMIVLAMERLLNLRN-SASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQ----GPAGGCRRGPHRS-GAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
M + QVQF+K+ELL A +A+ L ENE NLR L YR P YY++ EKSR++TF+AM IVLAMERLLNLR+ + L+ + E G RRRG G + C R S G G G + LDELDLG+ ++LV Q+ R++ PRRF R DL NL EDLAEL+G+RG +SV QQL IVQR+QR YKFL
Sbjct: 548 MMLIQVQFIKRELLIATTAIGQLARENELNLRMMATVPAFLLAWGSYRAVRPAYYWLKSEKSRESTFTAMCTIVLAMERLLNLRHREGTWLQLAADHPVAADEKKAEGEVGLPRRRGSLLKPLGHSDNCTRQVVVSAGRGQGLMAVRVLDELDLGKLMMLVHQVLRLIRSGPRRFPRRDLVNLHEDLAELVGERGLVSVGQQLQIVQRVQRSYKFL 763
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S1Z033_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z033_TRICV) HSP 1 Score: 108 bits (271), Expect = 7.370e-25 Identity = 79/211 (37.44%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVYRLWTPMYYF----VTREKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
MS+ ++QF+KKEL+NA+ +M+ LM NE N++ A L+Y + + YF + KS++ TF+ R IVL +ERLL +R++ P M + P+ GP+ G I L+ DLG +LLV + R I+W++ RRF A + N+SEDLAEL+G+RG +SV QQL IV RM R Y FL
Sbjct: 130 MSLIEMQFIKKELMNALCSMDELMGSNEINMKVAAMTPAFILMYGIRSLGRYFRYALLKLGKSKEETFAHFRTIVLDIERLLVMRDNPPSAPPPLMWGAANAN-------KNSMAPISVDPSSSTAAGPY---GDLGRSTI--LNAEDLGMLMLLVRECRTILWENRRRFSPAVVRNVSEDLAELVGERGSVSVQQQLQIVGRMCRTYSFL 328
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S3QA01_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QA01_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.970e-24 Identity = 76/211 (36.02%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAAT----ATLVYRLWTPMYYFVTREKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
+S+ ++QF+KKE+L A+ AM+ +M NE N++ A +T Y + +Y + KS++ TF++ R I+L +ERLL +R++A TA T +G R H + + ++++S+ D LG +LLV + R I+WQ RRF R++L N SEDLAEL G+RG +SV QQL I+ RM R Y FL
Sbjct: 741 LSLIEMQFIKKEMLTALYAMDEMMGTNEINIKLAAMTPAFILASTCRYMMRKVVYAILKIGKSKEETFASFRHILLDIERLLVMRDNAPPPPRSLFTAGNNTNVRMGSNR-------------------HNAAQQSNDQILSSDD---LGMLMLLVHECRVILWQDRRRFTRSELRNASEDLAELAGERGAVSVRQQLQIIARMCRTYSFL 929
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S2UIW5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIW5_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.840e-24 Identity = 73/218 (33.49%), Postives = 115/218 (52.75%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVY---RLWTPMYYFVTR-EKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPH-------RSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
MS+ ++QF+KKEL+NAM AM+ LM NE N+ A L+Y + +YY + + KSR+ T+++ R+++L MERLL +R++ P + ++ + PH S A ++ L DLG +L + + R I+W++ +RF R + ++SEDL+EL G+RGP+SV QQL I+ RM R Y FL
Sbjct: 56 MSLIEMQFIKKELMNAMYAMDELMSSNEININLASVTPAVLLLYGANHTFKFLYYALLKLGKSREETYASFRLVLLDMERLLLMRSNPPLAPPPLTWGESSKKNLLSS--------------------PHFGPMIVDDSSTRANNGDVTVLKSDDLGMLMLHIHECRTILWRNRKRFTRQIIRDVSEDLSELAGERGPVSVQQQLQIMARMARTYPFL 253
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S2LEI8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI8_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.180e-23 Identity = 76/216 (35.19%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVY--RLWTPMYYFVTRE--KSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALT-----RTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
M + +VQF+KKEL++AM ++ +MD NE N + A A L+Y R + +++ + +S++ T+++ R ++L +ERLL +R+SA + P +T RTE+ RRRG S E + L+ DLG VLLV + R ++ ++ RRF ++ N+ EDLAEL G+RG +SV QQL IV RM R Y F+
Sbjct: 94 MGLIEVQFIKKELMHAMKGIDEVMDSNELNFQLAATAPALMLMYAAREFAHFFFYALLKLGQSKEETYASFRYLMLEIERLLVMRDSALLVPPPLKDGITVAGNNRTENL--------RRRGMSFDE---------SEDLLEESDVVMLNTNDLGMLVLLVHECRTLILKNKRRFSDQEIRNVLEDLAELSGERGCVSVKQQLEIVSRMSRVYSFM 292
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: K0S9X0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9X0_THAOC) HSP 1 Score: 103 bits (256), Expect = 2.030e-22 Identity = 70/211 (33.18%), Postives = 106/211 (50.24%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVY---RLWTPMYYFVTR-EKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
M + ++QF+KKE+L+AM +M+ LM NE N++ A L+ R + ++Y + + KS++ + R +L +ERLL +R+S G P R H P + + TL DLG +L + + R I+WQ RRF ++ N++EDLAEL G+RGP+SV QQL I+ RM R Y FL
Sbjct: 199 MGLIEMQFIKKEMLSAMVSMDELMGSNEMNMQVAAMTPALFLLMTLRRFFQVLFYALFKFGKSKEEIHAQFRQTMLDIERLLLMRDSPPGPPPSLSWGSKRDSH-------------HDAPT---------------KNISQTLSAEDLGMLLLHIHECRSILWQSRRRFRSVEIRNVAEDLAELSGERGPVSVSQQLMIISRMSRTYPFL 381
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S2LGP4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGP4_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.550e-22 Identity = 76/216 (35.19%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVY--RLWTPMYYFVTRE--KSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALT-----RTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
M + +VQF+KKEL++AM ++ +MD NE N + A A L+Y R + +++ + +S++ T+++ R ++L +ERLL +R+SA + P +T RTE+ RRRG S E + L+ DLG VLLV + R ++ ++ RRF ++ N+ EDLAEL G+RG +SV QQL IV RM R Y F+
Sbjct: 572 MGLIEVQFIKKELMHAMKGIDEVMDSNELNFQLAATAPALMLMYAAREFAHFFFYALLKLGQSKEETYASFRYLMLEIERLLVMRDSALLVPPPLKDGITVAGNNRTENL--------RRRGMSFDE---------SEDLLEESDVVMLNTNDLGMLVLLVHECRTLILKNKRRFSDQEIRNVLEDLAELSGERGCVSVKQQLEIVSRMSRVYSFM 770
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S4MTH1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTH1_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.630e-22 Identity = 76/211 (36.02%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVYR---LWTPMYYFVTR-EKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
MS+ ++QF+KKEL+NA+ AM+ LM NE N++ A ++Y ++ ++Y + + KSR+ ++ R +L +ERLL +R++ P +T TE G Q R + GGC + L DLG +LL+ + R I+ ++ RRF R+ L ++SEDLAEL G+RG +SV QQL IV RM R Y FL
Sbjct: 257 MSLIEMQFIKKELMNALVAMDDLMSSNEINMKLAAMTPAFIILYGFRYVFRFLFYAMLKIGKSREEMYAEFRHNILDIERLLLMRDNPPSA-PPPLTWGGSTE----GANSQMRAEPSREKLGGC----------------NVLSAEDLGMLMLLIHECRTILNENRRRFARSGLRSVSEDLAELAGERGAVSVQQQLQIVARMCRTYPFL 446
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7S3L1P6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1P6_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.870e-21 Identity = 75/215 (34.88%), Postives = 115/215 (53.49%), Query Frame = 1
Query: 13 QVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVY---RLWTPMYYFVTR-EKSRKATFSAMRMIVLAMERLLNLRNSASGL---RPHDM---TALTRTE--HCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
++Q++K+E++NA++AM+ +M N+ N+ A LVY RL+ +Y+ V R +SR+ T+++ R I+ +ERLL +R+S + RP T+L +E H V + A +G + L DLG +LL+ +LR I+ + RRF R L +SEDLAEL G+RG +SV QQL I+ RM R Y FL
Sbjct: 270 EMQYMKREMMNALAAMDDVMSANDINMNLAAITPVILLVYANTRLFRFLYHAVLRLGRSREETYASFRSILTDIERLLVMRDSPPDMLSRRPQQFPPPTSLVSSEEGHVVV------------------------APAASGSLGVCVLSSDDLGLIMLLIHELRTILMRESRRFTRDVLRGVSEDLAELAGERGAVSVRQQLQILTRMNRNYSFL 460
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Match: A0A7R9ZKU9_9STRA (Hypothetical protein n=4 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKU9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.130e-20 Identity = 69/211 (32.70%), Postives = 106/211 (50.24%), Query Frame = 1
Query: 1 MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVYRLWTPM----YYFVTREKSRKATFSAMRMIVLAMERLLNLRNSASGLRPHDMTALTRTEHCVGGRRRQRRRRGQQGPAGGCRRGPHRSGAGAGEEMISTLDELDLGRFVLLVWQLRRIVWQHPRRFGRADLDNLSEDLAELMGDRGPISVPQQLCIVQRMQRCYKFL 621
MS + QFLKKE++NA+ A++ + N N+ A L+Y + Y + KS++ T+ + + +L MERLL +R+++S + T + R + G GPA R G G L DLG +L + +LR I+W+ RRF D+ +++EDLAEL G+RG + V QQ+ I+ RM R Y FL
Sbjct: 264 MSFIEAQFLKKEMMNALVALDDMQASNNMNMNLAAVTPAVFLIYACQRMLRFVRYALLKLGKSKEETYGSFQHGLLEMERLLVMRDNSSSYQ----TPMLRHDSVAGA-----------GPAQQTRGGLRHDGI--------VLRSDDLGMMMLHIHELRTILWRDRRRFSSNDIRSVAEDLAELAGERGAVCVSQQIQIIARMSRTYAFL 451 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5277.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5277.3.1 >prot_P-wetherbeei_contig5277.3.1 ID=prot_P-wetherbeei_contig5277.3.1|Name=mRNA_P-wetherbeei_contig5277.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MSIQQVQFLKKELLNAMSAMETLMDENEFNLRYAGCAATATLVYRLWTPMback to top mRNA from alignment at P-wetherbeei_contig5277:2298..3656- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5277.3.1 ID=mRNA_P-wetherbeei_contig5277.3.1|Name=mRNA_P-wetherbeei_contig5277.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1359bp|location=Sequence derived from alignment at P-wetherbeei_contig5277:2298..3656- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5277:2298..3656- >mRNA_P-wetherbeei_contig5277.3.1 ID=mRNA_P-wetherbeei_contig5277.3.1|Name=mRNA_P-wetherbeei_contig5277.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig5277:2298..3656- (Phaeothamnion wetherbeei SAG_119_79)back to top |